BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0085.p (309 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQ29.1 D8IQ29_HERSS Transcription regulator protein 489 e-136 Q48I98.1 Q48I98_PSE14 Transcriptional regulator, LysR family 324 1e-86 D7I0L1.1 D7I0L1_PSESS Transcriptional regulator, LysR family 323 2e-86 B1T9H3.1 B1T9H3_9BURK Transcriptional regulator, LysR family 323 2e-86 E7PNU0.1 E7PNU0_PSESG LysR family transcriptional regulator 323 2e-86 >D8IQ29.1 D8IQ29_HERSS Transcription regulator protein Length = 312 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 248/312 (79%), Positives = 278/312 (89%), Gaps = 3/312 (0%) Query: 1 MDLNQLEAFSAVMTIGSVTGAGRSLGRSQPAVSKALQDLESELGYALFDRNGPRVTPTDK 60 MDLNQLEAF+AVMT+GSVTGAGRSLGRSQPAVSKA+ DLESELGYALFDRNGPRVTPT K Sbjct: 1 MDLNQLEAFAAVMTLGSVTGAGRSLGRSQPAVSKAIGDLESELGYALFDRNGPRVTPTAK 60 Query: 61 AFLLYEEVERSLVGLRTIRERALEIGREELQPIHLVATPALASTIAPAALKMIEKNG--- 117 AFLLYEEVERSLVGLR+IRERALEI REE+ P+HLVATPALASTIAPAAL+++ +G Sbjct: 61 AFLLYEEVERSLVGLRSIRERALEIAREEVHPVHLVATPALASTIAPAALQLLAADGQHA 120 Query: 118 LPEHIHLRSASAEQVVHSVLHRTVSLGLTSLPVAHRGLDLHWIGQAPCVAVLRADSPLAR 177 PEH+HLRSASAEQVVH+VLHRTVSLGLTSLPVAHRGLDLHWIG+APCVAV+RAD PLA Sbjct: 121 FPEHVHLRSASAEQVVHAVLHRTVSLGLTSLPVAHRGLDLHWIGEAPCVAVVRADHPLAS 180 Query: 178 LDVVTVDALRGERVITMSNRYRLRQRIDMALAQDKPLDVAIETNTSFNAVMAAHAGLGVA 237 D +T ALRG+RVITMSNRYRLRQR+++AL +D LDVAI+TNTSFNA+MAA AGLGVA Sbjct: 181 KDKLTRAALRGQRVITMSNRYRLRQRVELALGEDSQLDVAIDTNTSFNAIMAARAGLGVA 240 Query: 238 LVEPMTALGMPIEGLAVRPLAVNIPFYFGVVTPFGKPVDAVTQALIAAIETAARNILHGF 297 LVEP TA GMPIEG+ V+ LAV IPFYFGVVTP+GKPV+ VT+ LI A+E AAR L GF Sbjct: 241 LVEPATAYGMPIEGMVVKRLAVEIPFYFGVVTPYGKPVEGVTERLIDAVEQAARTTLQGF 300 Query: 298 VRRDAGDHDDLL 309 V+RDA HD+LL Sbjct: 301 VKRDASLHDELL 312 >Q48I98.1 Q48I98_PSE14 Transcriptional regulator, LysR family Length = 318 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 227/311 (72%), Gaps = 3/311 (0%) Query: 1 MDLNQLEAFSAVMTIGSVTGAGRSLGRSQPAVSKALQDLESELGYALFDRNGPRVTPTDK 60 MDL QLEAF+AVM+ GSVT AG+ LGRSQP+V++A+Q+LE ELG+ALF+R+GP+VTPT K Sbjct: 3 MDLRQLEAFAAVMSAGSVTAAGKMLGRSQPSVTRAIQELEQELGFALFERSGPKVTPTHK 62 Query: 61 AFLLYEEVERSLVGLRTIRERALEIGREELQPIHLVATPALASTIAPAALKMIEKNGLPE 120 AF++Y EVE +L+G+R IR+RA I +EE I LVA ALA+ + P AL + ++ P+ Sbjct: 63 AFMMYGEVESALLGVRNIRQRAQHIAQEENHQIKLVAISALAAGLLPTALSRLPEHLRPQ 122 Query: 121 HIHLRSASAEQVVHSVLHRTVSLGLTSLPVAHRGLDLHWIGQAPCVAVLRADSPLARLDV 180 I L+S S E VV +VL +T+ LG SLP+ HRGL++HWIG+APCVAVL ADS LA +V Sbjct: 123 QIQLQSMSPENVVQAVLSKTMDLGAVSLPLEHRGLEIHWIGEAPCVAVLPADSALAAHEV 182 Query: 181 VTVDALRGERVITMSNRYRLRQRIDMAL--AQDKPLDVAIETNTSFNAVMAAHAGLGVAL 238 ++++ LR + +ITM+N YR R+RID A A +P + ++TNTS A+ A GLG+AL Sbjct: 183 LSIELLRQQTLITMANPYRFRRRIDKAFQDAGGQPPRM-LDTNTSLIAMQMARVGLGIAL 241 Query: 239 VEPMTALGMPIEGLAVRPLAVNIPFYFGVVTPFGKPVDAVTQALIAAIETAARNILHGFV 298 V+P TA+G+P++G+ VRP+A NIPF+FG+++ F P+ V ALI I +A+ +L + Sbjct: 242 VDPFTAIGVPLQGVVVRPIACNIPFFFGLISAFASPLSDVASALIDEIADSAKTLLPAMI 301 Query: 299 RRDAGDHDDLL 309 +A HD LL Sbjct: 302 MHEASAHDALL 312 >D7I0L1.1 D7I0L1_PSESS Transcriptional regulator, LysR family Length = 318 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 227/311 (72%), Gaps = 3/311 (0%) Query: 1 MDLNQLEAFSAVMTIGSVTGAGRSLGRSQPAVSKALQDLESELGYALFDRNGPRVTPTDK 60 MDL QLEAF+AVM+ GSVT AG+ LGRSQP+V++A+Q+LE ELG+ALF+R+GP+VTPT K Sbjct: 3 MDLRQLEAFAAVMSAGSVTAAGKMLGRSQPSVTRAIQELEQELGFALFERSGPKVTPTHK 62 Query: 61 AFLLYEEVERSLVGLRTIRERALEIGREELQPIHLVATPALASTIAPAALKMIEKNGLPE 120 AF++Y EVE +L+G+R IR+RA I +EE I LVA ALA+ + P AL + ++ P+ Sbjct: 63 AFMMYGEVESALLGVRNIRQRAQHIAQEENHQIKLVAISALAAGLLPTALSRLPEHLRPQ 122 Query: 121 HIHLRSASAEQVVHSVLHRTVSLGLTSLPVAHRGLDLHWIGQAPCVAVLRADSPLARLDV 180 I L+S S E VV +VL +T+ LG SLP+ HRGL++HWIG+APCVAVL ADS LA +V Sbjct: 123 QIQLQSMSPENVVQAVLSKTMDLGAVSLPLEHRGLEIHWIGEAPCVAVLPADSALATHEV 182 Query: 181 VTVDALRGERVITMSNRYRLRQRIDMAL--AQDKPLDVAIETNTSFNAVMAAHAGLGVAL 238 ++++ LR + +ITM+N YR R+RID A A +P + ++TNTS A+ A GLG+AL Sbjct: 183 LSMELLRQQTLITMANPYRFRRRIDKAFQDAGGQPPRM-LDTNTSLIAMQMARVGLGIAL 241 Query: 239 VEPMTALGMPIEGLAVRPLAVNIPFYFGVVTPFGKPVDAVTQALIAAIETAARNILHGFV 298 V+P TA+G+P++G+ VRP+A NIPF+FG+++ F P+ V ALI I +A+ +L + Sbjct: 242 VDPFTAIGVPLQGVVVRPIACNIPFFFGLISAFASPLSDVASALIDEIADSAKTLLPAMI 301 Query: 299 RRDAGDHDDLL 309 +A HD LL Sbjct: 302 MHEASAHDALL 312 >B1T9H3.1 B1T9H3_9BURK Transcriptional regulator, LysR family Length = 339 Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 168/310 (54%), Positives = 214/310 (69%), Gaps = 1/310 (0%) Query: 1 MDLNQLEAFSAVMTIGSVTGAGRSLGRSQPAVSKALQDLESELGYALFDRNGPRVTPTDK 60 M+L+QLEAFSAVM+ GSVTGAG LGRSQPAV++ +Q+LE++LGYALFDR+GPRVTPT + Sbjct: 1 MELHQLEAFSAVMSAGSVTGAGELLGRSQPAVTRQIQELEADLGYALFDRHGPRVTPTRR 60 Query: 61 AFLLYEEVERSLVGLRTIRERALEIGREELQPIHLVATPALASTIAPAALKMIEKNGLPE 120 AFLLYEEVERSL+GLR I RA +G E +P+ + ATP+LA+T+ PAAL + Sbjct: 61 AFLLYEEVERSLIGLRAIEARARALGDETAEPVRIAATPSLAATLVPAALAALPDGAYAP 120 Query: 121 HIHLRSASAEQVVHSVLHRTVSLGLTSLPVAHRGLDLHWIGQAPCVAVLRADSPLARLDV 180 H LRS SAE VVH VL T +G+ +LP+AH GLD+HWI Q PCVAVL AD PLA Sbjct: 121 HYQLRSESAEHVVHEVLAGTADIGVVTLPMAHAGLDVHWIAQTPCVAVLPADDPLAAKPR 180 Query: 181 VTVDALRGERVITMSNRYRLRQRI-DMALAQDKPLDVAIETNTSFNAVMAAHAGLGVALV 239 + + L R++T++NR+RLRQRI A V IETN S NAVMAA AG+G+ +V Sbjct: 181 IALRDLARRRIVTVANRHRLRQRIDAAFAAARVDARVFIETNASLNAVMAARAGIGIGIV 240 Query: 240 EPMTALGMPIEGLAVRPLAVNIPFYFGVVTPFGKPVDAVTQALIAAIETAARNILHGFVR 299 +P T + +P++G+ RPL V+IPF FGV TP GK AL+ A+ R +L + Sbjct: 241 DPATGVALPVDGVVARPLDVDIPFAFGVATPAGKARTTAVDALLDALHRTTRALLDDVIF 300 Query: 300 RDAGDHDDLL 309 DA HD LL Sbjct: 301 HDAAAHDALL 310 >E7PNU0.1 E7PNU0_PSESG LysR family transcriptional regulator Length = 316 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 162/311 (52%), Positives = 227/311 (72%), Gaps = 3/311 (0%) Query: 1 MDLNQLEAFSAVMTIGSVTGAGRSLGRSQPAVSKALQDLESELGYALFDRNGPRVTPTDK 60 MDL QLEAF+AVM+ GSVT AG+ LGRSQP+V++A+Q+LE ELG+ALF+R+GP+VTPT K Sbjct: 1 MDLRQLEAFAAVMSAGSVTAAGKMLGRSQPSVTRAIQELEQELGFALFERSGPKVTPTHK 60 Query: 61 AFLLYEEVERSLVGLRTIRERALEIGREELQPIHLVATPALASTIAPAALKMIEKNGLPE 120 AF++Y EVE +L+G+R IR+RA I +EE I LVA ALA+ + P AL + ++ P+ Sbjct: 61 AFMMYGEVESALLGVRNIRQRAQHIAQEENHQIKLVAISALAAGLLPTALSRLPEHLRPQ 120 Query: 121 HIHLRSASAEQVVHSVLHRTVSLGLTSLPVAHRGLDLHWIGQAPCVAVLRADSPLARLDV 180 I L+S S E VV +VL +T+ LG SLP+ HRGL++HWIG+APCVAVL ADS LA +V Sbjct: 121 QIQLQSMSPENVVQAVLSKTMDLGAVSLPLEHRGLEIHWIGEAPCVAVLPADSALAAHEV 180 Query: 181 VTVDALRGERVITMSNRYRLRQRIDMAL--AQDKPLDVAIETNTSFNAVMAAHAGLGVAL 238 ++++ LR + +ITM+N YR R+RID A A +P + ++TNTS A+ A GLG+AL Sbjct: 181 LSMELLRQQTLITMANPYRFRRRIDKAFQDAGGQPPRM-LDTNTSLIAMQMARVGLGIAL 239 Query: 239 VEPMTALGMPIEGLAVRPLAVNIPFYFGVVTPFGKPVDAVTQALIAAIETAARNILHGFV 298 V+P TA+G+P++G+ VRP+A NIPF+FG+++ F P+ V ALI I +A+ +L + Sbjct: 240 VDPFTAIGVPLQGVVVRPIACNIPFFFGLISAFASPLSDVASALIDEIADSAKTLLPAMI 299 Query: 299 RRDAGDHDDLL 309 +A HD LL Sbjct: 300 MHEASAHDALL 310