BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0082.p (483 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWX6.1 D8IWX6_HERSS Sensor histidine kinase protein EC=2.7.3.- 788 0.0 C9YCY6.1 C9YCY6_9BURK Putative uncharacterized protein 516 e-144 A3YD80.1 A3YD80_9GAMM Putative Signal transduction histidine kinase 417 e-114 F2K037.1 F2K037_9GAMM Integral membrane sensor signal transducti... 411 e-112 Q2S9E2.1 Q2S9E2_HAHCH Signal transduction histidine kinase 402 e-110 >D8IWX6.1 D8IWX6_HERSS Sensor histidine kinase protein EC=2.7.3.- Length = 478 Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/477 (83%), Positives = 439/477 (92%) Query: 6 LPNSLLGRLSVVMIFGVLVTQLAGGLIWAAQLRTKSEAETRVAAQHLAHSASGAIRYFMT 65 +P+SLLGRLSVVMIFGVLVTQ+AGGLIWA QLR+KSEAETR AAQHLAHSA+ AIRYFMT Sbjct: 1 MPDSLLGRLSVVMIFGVLVTQVAGGLIWAVQLRSKSEAETRTAAQHLAHSAASAIRYFMT 60 Query: 66 LPANYRPIMIQQLREMGGTRFFINANSALVPIPPIAPNSLADIATEAAAETLKSDLAFLP 125 LP NYRP+MIQQLREMGGTRFFINANS+ V + I + LA +A + AA+TL+ DL FLP Sbjct: 61 LPPNYRPLMIQQLREMGGTRFFINANSSAVAVKSIGDSRLAKLAIDVAAQTLREDLPFLP 120 Query: 126 EFHLSFAWPDNLPVSDDGLKIGDLPDSWVQHILLIKPNPAPVLVIQTQIESGKWLYLAAL 185 E L+FAWPD LPV+ DGL + DLPD+WVQHIL+ KPN APVLVIQ Q+ESG+W+YLAAL Sbjct: 121 EARLAFAWPDGLPVASDGLTVNDLPDNWVQHILMTKPNSAPVLVIQMQVESGRWIYLAAL 180 Query: 186 MPNPYFLDSSNPLSLDRVVLQGLSLAAILLLTILVVRWTTRPLAALSDAAEAFGKGETVP 245 MPNPYFLDS NPL LDR+VLQGLSLAAILLLTILVVRWTTRPLAAL+DAAEAFGKGETVP Sbjct: 181 MPNPYFLDSDNPLWLDRLVLQGLSLAAILLLTILVVRWTTRPLAALADAAEAFGKGETVP 240 Query: 246 ELPETGSREFVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELLDDDD 305 LPETGSRE+VKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTEL+DDD Sbjct: 241 SLPETGSREYVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELMDDDA 300 Query: 306 LRTEFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVARMIRDASMAGHEVAFEPS 365 +RT+FHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALV RMIRDA +AGHE+AF PS Sbjct: 301 MRTDFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVLRMIRDARLAGHEIAFTPS 360 Query: 366 GVNVMAKPLALKRAIGNLFDNALHYGEKVEIAIRQSQALEGDMVEIEIRDHGPGVPEDAM 425 G+NV+AKPLALKRAIGNLFDNAL+YG+KVEI+IR S EGD+VEIEIRDHGPGVPEDAM Sbjct: 361 GINVIAKPLALKRAIGNLFDNALYYGQKVEISIRPSPGAEGDLVEIEIRDHGPGVPEDAM 420 Query: 426 GSLFQPYVRLEHGRSANSGGMGLGLGIARNIVQAHGGELLLRNHPNGGLIATIIVPA 482 G+LFQPYVRLEHGR+ NSGGMGLGLGI+RNIVQAHGGELLLRNHP GGL+ATII+PA Sbjct: 421 GTLFQPYVRLEHGRAQNSGGMGLGLGISRNIVQAHGGELLLRNHPEGGLMATIILPA 477 >C9YCY6.1 C9YCY6_9BURK Putative uncharacterized protein Length = 491 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 265/486 (54%), Positives = 350/486 (72%), Gaps = 17/486 (3%) Query: 4 RVLPNSLLGRLSVVMIFGVLVTQLAGGLIWAAQLRTKSEAETRVAAQHLAHSASGAIRYF 63 R LP+SLLGR+ VVM GV+ QL G L+WA QLR + AE A +A +A+G+IR+F Sbjct: 12 RYLPDSLLGRIVVVMALGVISAQLVGTLLWARQLRESARAEALSAGHAIALNAAGSIRFF 71 Query: 64 MTLPANYRPIMIQQLREMGGTRFFINANSALVPIPPIAPNSLADIATEAAAETLKSDLAF 123 LP +RPI+I+QLR MGGTRFFIN N A VP+ P+ N L D EA L +LA Sbjct: 72 RDLPPQFRPILIEQLRTMGGTRFFINVNKARVPVQPVEGNGLVDAVVEAMQGDLTRNLAG 131 Query: 124 LPEF-HLSFAWPDNLPVSDDGLKIGDLPDSWVQHILLIKPNPAPVLVIQTQIESGKWLYL 182 + ++FAWP++L VSDDG + DLPDSWV+ LL++P PAPVLVIQ + E G+WLYL Sbjct: 132 NTQAPSVAFAWPESLQVSDDGRMVRDLPDSWVEATLLLRPRPAPVLVIQAEFEPGRWLYL 191 Query: 183 AALMPNPYFLDSSNPLSLDRVVLQGLSLAAILLLTILVVRWTTRPLAALSDAAEAFGKGE 242 A MP+PYFL+++NPL+ DRV LQ ++L L++++L+VR RPL ++ AA AFG + Sbjct: 192 ATTMPDPYFLENANPLTWDRVALQLVTLLTALVISVLLVRGLIRPLNKIASAANAFGS-D 250 Query: 243 TVPE-LPETGSREFVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELL 301 T PE +PETG+ E +TARAF+ M+ RI+ YL DRERLF+ ISH L+TPI RLKLRTELL Sbjct: 251 TAPESVPETGTAELRRTARAFNEMQARIQGYLVDRERLFLGISHGLKTPIMRLKLRTELL 310 Query: 302 DDDDLRTEFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVARMIR-----DASMA 356 DDD LR EFH+DLD+LD+MVK ALQSVKD+DIHEN T VRLD L+AR+ + DA++ Sbjct: 311 DDDTLRAEFHEDLDDLDVMVKAALQSVKDTDIHENLTPVRLDTLLARLAQRPIHPDATI- 369 Query: 357 GHEVAFEPSGVNVMAKPLALKRAIGNLFDNALHYGEKVEIAIRQSQALEGDMVEIEIRDH 416 E EP V+V+ KPLAL+RA+ NL DNA+ YGE+V++ + +L+G +E+RD Sbjct: 370 --ECTAEP--VSVLGKPLALERALSNLLDNAVLYGERVQVRL----SLQGSRALVEVRDF 421 Query: 417 GPGVPEDAMGSLFQPYVRLEHGRSANSGGMGLGLGIARNIVQAHGGELLLRNHPNGGLIA 476 GPG+ + +M + F+P+VRL HG+ N G GLGLGIARNI+QAHGGE+ L NH GGL+ Sbjct: 422 GPGIAQASMSAAFEPHVRLSHGQQQNRTGTGLGLGIARNIIQAHGGEIRLHNHAEGGLVV 481 Query: 477 TIIVPA 482 T+++ A Sbjct: 482 TVLLAA 487 >A3YD80.1 A3YD80_9GAMM Putative Signal transduction histidine kinase Length = 497 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 217/481 (45%), Positives = 308/481 (64%), Gaps = 7/481 (1%) Query: 4 RVLPNSLLGRLSVVMIFGVLVTQLAGGLIWAAQLRTKSEAETRVAAQHLAHSASGAIRYF 63 R L +SL G++ +++ GV QL IW QL +E R AQ +A + I YF Sbjct: 23 RRLHHSLTGQILIILALGVTAAQLFSSTIWLKQLAADAEQNVREVAQPMAFRVASTISYF 82 Query: 64 MTLPANYRPIMIQQLREMGGTRFFINANSALVPIPPIAPNSLADIATEAAAETLKSDLAF 123 +LP NYR I+I QL+EMGGTRFF+ N+ + I + + L +I E TL L Sbjct: 83 SSLPQNYRHIVIDQLQEMGGTRFFVTVNNEEILINELEESPLQNIVIEEFRNTLAKQLG- 141 Query: 124 LPEFHLSFAWPDNLPVSDDGLKIGDLPDSWVQHILLIKPNPAPVLVIQTQIESGKWLYLA 183 + ++F+ PD+L V ++ ++ DLP+ W H LL+KP P+LVIQ I WLYLA Sbjct: 142 ITNPKIAFSSPDDLHVINNHTRLSDLPERWGHHSLLVKPLTPPILVIQIPINEKDWLYLA 201 Query: 184 ALMPNPYFLDSSNPLSLDRVVLQGLSLAAILLLTILVVRWTTRPLAALSDAAEAFGKGET 243 LMP+PYFLD S+P+S D++ +S+ +LLL+ L++R T+PLA L+ AAE+FG+G+ Sbjct: 202 TLMPDPYFLDDSSPISNDKLFSLAISIMTVLLLSFLIIRRVTKPLAKLARAAESFGQGDY 261 Query: 244 VPELPETGSREFVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELLDD 303 P + E GS E TA AF+ M+ RI+RYL+DRERLF SISHDL+TPITRL+LR E++D+ Sbjct: 262 QP-VEEVGSEEIRNTAHAFNAMQTRIQRYLDDRERLFASISHDLKTPITRLRLRAEMVDE 320 Query: 304 DDLRTEFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVARMIRDASMAGHEVAFE 363 +D R DL++LDM+VKGALQSVK++DIHENR E+ + ++ + A +A ++ Sbjct: 321 EDTREAMVRDLEDLDMLVKGALQSVKETDIHENRVEINILKMLKDLQNSAHLAQRDMQLS 380 Query: 364 PS-GVNVMAKPLALKRAIGNLFDNALHYGEKVEIAIRQSQALEGDMVEIEIRDHGPGVPE 422 + KPLA+KR + NL DN L+YG++V++ + + ++V I I D GPG+P Sbjct: 381 GELNQAYVGKPLAIKRCLTNLIDNGLYYGDRVKVELDN----DDELVTIRILDEGPGIPS 436 Query: 423 DAMGSLFQPYVRLEHGRSANSGGMGLGLGIARNIVQAHGGELLLRNHPNGGLIATIIVPA 482 + M +FQPY RL + + GMGLGL IARNI +AHGGE+ L N P GGL A +I+P Sbjct: 437 EKMEKVFQPYTRLTIKHANHPSGMGLGLSIARNIARAHGGEVHLINRPEGGLEAKLILPL 496 Query: 483 H 483 H Sbjct: 497 H 497 >F2K037.1 F2K037_9GAMM Integral membrane sensor signal transduction histidine kinase Length = 484 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 224/479 (46%), Positives = 308/479 (64%), Gaps = 10/479 (2%) Query: 8 NSLLGRLSVVMIFGVLVTQLAGGLIWAAQLRTKSEAETRVAAQHLAHSASGAIRYFMTLP 67 SL G++ ++M FGV QL IW QL+ +E + + H+A + + YF +LP Sbjct: 13 QSLTGQILIIMAFGVASAQLVSSAIWLRQLQADTEKNVQEVSTHMAFRIAATVSYFSSLP 72 Query: 68 ANYRPIMIQQLREMGGTRFFINANSALVPIPPIAPNSLADIATEAAAETLKSDLAFLPEF 127 NYR I+I QL++MGGTRFF+ N + I + + L I + TL L + Sbjct: 73 QNYRHIVIDQLQDMGGTRFFVTLNKEYITIDALPESKLKRIVKDEIHNTLSRQLG-IHTA 131 Query: 128 HLSFAWPDNLPVSDDGLKIGDLPDSWVQHILLIKPNPAPVLVIQTQIESGKWLYLAALMP 187 +SF+ PDNL V ++ K+ DLP+ W H L++KP P+++IQ Q+ +WLYLA+LMP Sbjct: 132 DISFSSPDNLRVINNQTKLSDLPERWGHHSLMMKPLTPPIVIIQIQVSESEWLYLASLMP 191 Query: 188 NPYFLDSSNPLSLDRVVLQGLSLAAILLLTILVVRWTTRPLAALSDAAEAFGKGETVPEL 247 PYFLD S+ L+ DR+ S+ +LLLT+L +R TTRPLA L+ AAE FGKG+ P L Sbjct: 192 APYFLDESSLLTADRLFSLTASVITVLLLTLLFIRRTTRPLALLAHAAEQFGKGDWKP-L 250 Query: 248 PETGSREFVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELLDDDDLR 307 E G+ E KTA AF+ M++RI+RY++DRERLF SISHDL+TPITRL+LR E+LD+D+ R Sbjct: 251 KEDGALEVRKTAHAFNDMQKRIQRYVDDRERLFASISHDLKTPITRLRLRAEMLDEDEAR 310 Query: 308 TEFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVARMIRDASMAGHEV-AFEPSG 366 DL++LDM+VKGALQSVK++DIHENR E+ L+ L+ + A++ +V F Sbjct: 311 DAMVRDLEDLDMLVKGALQSVKETDIHENRVELDLERLLKDIQSSANIHITKVQVFGQLQ 370 Query: 367 VNVMAKPLALKRAIGNLFDNALHYGEKVEIAIRQSQALEGDMVEIEIRDHGPGVPEDAMG 426 + KPLA+KR +GNL DNAL+YG EI I ++ D + I I D GPG+P D + Sbjct: 371 HPYVGKPLAIKRCLGNLIDNALYYGNTAEIFIEDTE----DTLCIRICDKGPGIPLDKID 426 Query: 427 SLFQPYVRL--EHGRSANSGGMGLGLGIARNIVQAHGGELLLRNHPNGGLIATIIVPAH 483 +FQPY RL EH + GMGLGL IARNI +AHGGE+ L N P GL A +++P H Sbjct: 427 KVFQPYTRLVPEHS-GHHPTGMGLGLSIARNIARAHGGEVSLSNRPKKGLEAKLLLPRH 484 >Q2S9E2.1 Q2S9E2_HAHCH Signal transduction histidine kinase Length = 493 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 213/483 (44%), Positives = 297/483 (61%), Gaps = 9/483 (1%) Query: 2 LDRVLPNSLLGRLSVVMIFGVLVTQLAGGLIWAAQLRTKSEAETRVAAQHLAHSASGAIR 61 L R++P SLL R+ +V++ VL Q LIW AQ++T+++ + HLA S + +R Sbjct: 11 LTRLVPRSLLSRMVIVLVIAVLAAQALSSLIWVAQIKTRNQENVLSMSNHLAFSIASTVR 70 Query: 62 YFMTLPANYRPIMIQQLREMGGTRFFINANSALVPIPPIAPNSLADIATEAAAETLKSDL 121 +F +LP YR I++ QLR MGG+RFF+ NS L+ I P L E L+ +L Sbjct: 71 FFKSLPVEYRHIVLDQLRRMGGSRFFVTFNSELINISPTPDTDLKRWVLEEVDSVLQREL 130 Query: 122 AFLPEFHLSFAWPDNLPVSDDGLKIGDLPDSWVQHILLIKPNPAPVLVIQTQIESGKWLY 181 E F++ ++L V ++ +++ DLP W H LL+ P P+LV+Q +E +WLY Sbjct: 131 GRQVEIISEFSFAESLRVFNNDIRLLDLPPGWGHHSLLLHPQKTPILVVQIGLEKDEWLY 190 Query: 182 LAALMPNPYFLDSSNPLSLDRVVLQGLSLAAILLLTILVVRWTTRPLAALSDAAEAFGKG 241 LA L+P P L + L +R+ G+++ ++L +VVRW TRPL LS AA+ GK Sbjct: 191 LATLLPTPDGLIEGDYLPAERLWFMGITVILVVLSLFVVVRWLTRPLKLLSRAADELGKD 250 Query: 242 ETVPELPETGSREFVKTARAFSGMRERIKRYLEDRERLFVSISHDLRTPITRLKLRTELL 301 P LPE GS E V AR F+ M+ERI+RY++DRE LF +ISHDL+TPITRL+LR E+L Sbjct: 251 IERPPLPEEGSTEVVAAARTFNSMQERIQRYIQDRETLFSAISHDLKTPITRLRLRAEML 310 Query: 302 DDDDLRTEFHDDLDELDMMVKGALQSVKDSDIHENRTEVRLDALVARMIRDASMAGHEVA 361 DDD R +F DL++LD MV GALQ VKD+ +HEN + L L+ ++ A + +V Sbjct: 311 DDDAQRGKFIQDLEDLDHMVHGALQCVKDTTVHENPVNIDLHYLLQQICEGADLQRKKVT 370 Query: 362 FEPSGV---NVMAKPLALKRAIGNLFDNALHYGEKVEIAIRQSQALEGDMVEIEIRDHGP 418 SG+ KPLALKRA N+ DNAL YG + E+ + Q EG V + +RD GP Sbjct: 371 L--SGLLEQPFWGKPLALKRAFSNIIDNALFYGHQAEVFLEDVQ--EG--VHVAVRDFGP 424 Query: 419 GVPEDAMGSLFQPYVRLEHGRSANSGGMGLGLGIARNIVQAHGGELLLRNHPNGGLIATI 478 GVPE +F+PYVRLE R+ N+GG GLGL IARNI+ AHGG L +RNH GG + + Sbjct: 425 GVPEMEQDRIFEPYVRLEKSRNRNTGGSGLGLSIARNIIHAHGGRLKVRNHEQGGFVVEV 484 Query: 479 IVP 481 +P Sbjct: 485 WLP 487