BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0053.p         (175 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6SZ54.1 A6SZ54_JANMA Transcriptional regulator, LysR family          175   2e-42
D8IS28.1 D8IS28_HERSS Transcription regulator protein                 171   3e-41
Q3KFF9.1 Q3KFF9_PSEPF Putative LysR family transcriptional regul...   161   3e-38
F2KJY7.1 F2KJY7_PSEBR Putative Transcription factor, LysR family      157   4e-37
B1J4U7.1 B1J4U7_PSEPW Transcriptional regulator, LysR family          157   6e-37

>A6SZ54.1 A6SZ54_JANMA Transcriptional regulator, LysR family
          Length = 307

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/104 (80%), Positives = 91/104 (87%)

Query: 36  FQRSTRSLSLTEAGERFLREVSGGLSSIQSAVANLASADGQPAGVLKVSMGTGFGREYIV 95
           FQRSTR L+LTEAGERFL EVSGGL+ IQSAVANLASADGQPAG LK+SMGTGFGR YIV
Sbjct: 49  FQRSTRRLTLTEAGERFLAEVSGGLAVIQSAVANLASADGQPAGTLKISMGTGFGRHYIV 108

Query: 96  PLLGGFLERYPAISPDWYFDNRPVDLITEGFDAAIGGGXLITEG 139
           PLLG FL RYPAI+PDW+FDNR VD+I EGFDAAIGGG  +  G
Sbjct: 109 PLLGDFLTRYPAITPDWHFDNRRVDMIAEGFDAAIGGGFELPPG 152


>D8IS28.1 D8IS28_HERSS Transcription regulator protein
          Length = 308

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/107 (76%), Positives = 91/107 (85%)

Query: 36  FQRSTRSLSLTEAGERFLREVSGGLSSIQSAVANLASADGQPAGVLKVSMGTGFGREYIV 95
           F RSTR LSLTEAGERFL+EV GGL +I+SAVANLASA GQPAG LKVSMGTGFGR+YIV
Sbjct: 49  FHRSTRKLSLTEAGERFLQEVGGGLQAIRSAVANLASAGGQPAGTLKVSMGTGFGRQYIV 108

Query: 96  PLLGGFLERYPAISPDWYFDNRPVDLITEGFDAAIGGGXLITEGFDA 142
           PLLG FL RYP I PDW+F+NRPVDLI+EGFDAAI GG  ++ G  A
Sbjct: 109 PLLGEFLGRYPGIQPDWHFENRPVDLISEGFDAAIAGGTELSPGVVA 155


>Q3KFF9.1 Q3KFF9_PSEPF Putative LysR family transcriptional regulator
          Length = 328

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 97/125 (77%), Gaps = 2/125 (1%)

Query: 28  QRRLTSGTFQRSTRSLSLTEAGERFLREVSGGLSSIQSAVANLASADGQPAGVLKVSMGT 87
           + RL    FQRSTR L+LTEAG+ FL EVSG L++IQ+AV NLASA GQPAG LKVSMGT
Sbjct: 56  EARLGVRLFQRSTRRLTLTEAGQLFLSEVSGSLTTIQNAVNNLASAGGQPAGTLKVSMGT 115

Query: 88  GFGREYIVPLLGGFLERYPAISPDWYFDNRPVDLITEGFDAAIGGGXLITEGFDAAIRRI 147
            FGR YIVPLLG FL+R+PAI+PDW+FDNR VDLI +GFDAAIGGG  + +G  A  RR+
Sbjct: 116 VFGRLYIVPLLGEFLKRFPAINPDWHFDNRQVDLIGQGFDAAIGGGFELPQGVVA--RRL 173

Query: 148 VSCWR 152
               R
Sbjct: 174 TPAHR 178


>F2KJY7.1 F2KJY7_PSEBR Putative Transcription factor, LysR family
          Length = 307

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/115 (67%), Positives = 90/115 (78%)

Query: 28  QRRLTSGTFQRSTRSLSLTEAGERFLREVSGGLSSIQSAVANLASADGQPAGVLKVSMGT 87
           + R+    FQRSTRSL LTEAG+ FL EV    ++IQ+AVANLASA GQPAG LKVSMGT
Sbjct: 41  EARMGVRLFQRSTRSLRLTEAGQLFLGEVGSSFNTIQNAVANLASAGGQPAGTLKVSMGT 100

Query: 88  GFGREYIVPLLGGFLERYPAISPDWYFDNRPVDLITEGFDAAIGGGXLITEGFDA 142
            FGR Y+VPLLG FL RYPAI+PDW+FDNR VDLI +GFDAAIGGG  + +G  A
Sbjct: 101 AFGRLYVVPLLGEFLRRYPAINPDWHFDNRQVDLIGQGFDAAIGGGFELPQGVVA 155


>B1J4U7.1 B1J4U7_PSEPW Transcriptional regulator, LysR family
          Length = 325

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 81/123 (65%), Positives = 94/123 (76%), Gaps = 2/123 (1%)

Query: 30  RLTSGTFQRSTRSLSLTEAGERFLREVSGGLSSIQSAVANLASADGQPAGVLKVSMGTGF 89
           RL    FQRSTR L+LTEAG+RFL EVS    +IQ AVANLASA+GQPAG+L+VSMGT F
Sbjct: 59  RLGVRLFQRSTRKLTLTEAGQRFLGEVSDSFRTIQYAVANLASAEGQPAGLLRVSMGTVF 118

Query: 90  GREYIVPLLGGFLERYPAISPDWYFDNRPVDLITEGFDAAIGGGXLITEGFDAAIRRIVS 149
           GR Y++PLLG FL RYPAI+PDW+FDNR VDLI +GFDAAIGGG  +  G  A  RR+  
Sbjct: 119 GRLYVLPLLGEFLRRYPAITPDWHFDNRQVDLIGQGFDAAIGGGFELPLGVVA--RRLTP 176

Query: 150 CWR 152
             R
Sbjct: 177 AHR 179