BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0049.p (424 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B6AZA8.1 B6AZA8_9RHOB Glycerol-3-phosphate ABC transporter, peri... 564 e-159 A3JVN8.1 A3JVN8_9RHOB Probable extracellular solute-binding protein 558 e-157 Q0FFW7.1 Q0FFW7_9RHOB Probable extracellular solute-binding protein 553 e-155 B5J9Q8.1 B5J9Q8_9RHOB Bacterial extracellular solute-binding pro... 552 e-155 A3W659.1 A3W659_9RHOB Probable extracellular solute-binding protein 550 e-154 >B6AZA8.1 B6AZA8_9RHOB Glycerol-3-phosphate ABC transporter, periplasmic binding protein Length = 420 Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust. Identities = 265/421 (62%), Positives = 331/421 (78%), Gaps = 2/421 (0%) Query: 4 KLIKKTALAALFASALTASSMASAATELTMYYPIAVGGPLTDVIDGMINDFQKSNPDIKV 63 KL T LA A L S ASA TELTMYYPIAVGG LT+V+DG+++ F+ +NPDI V Sbjct: 2 KLFSTTGLATALAVGLITS--ASAETELTMYYPIAVGGKLTEVVDGIVDKFEAANPDISV 59 Query: 64 KAVYSGNYDETRVRALSAIKGGQPAQLSVLGALDTYDLIDQNLIEPFDKVATSAEDKAWL 123 A+YSGNYD+TRVRALSA+ G+PAQL+V+ ++D YDLI+Q+L+ PF+ VATS DK WL Sbjct: 60 NAIYSGNYDDTRVRALSALASGEPAQLAVMFSIDAYDLIEQDLVVPFEDVATSDADKEWL 119 Query: 124 QSFYPGLMANGTIGGHVWGIPFQRSTIVMFYNKDMFRAAGLNPDAPPKTWKEMLAAATKL 183 SFYP LMANG I G WGIPFQRSTIV +YNKD+FRAAGL+P+APPKTW EM++ L Sbjct: 120 GSFYPALMANGQIEGKTWGIPFQRSTIVAYYNKDLFRAAGLDPEAPPKTWDEMISMGKAL 179 Query: 184 TGKDKFGLMIPSTGYPYWMFQAFAIQNGVSLMNKEGTQVYFNTPAAVEALEFWRSLAATH 243 T D +GLMIPSTGYPYWMFQA AIQNG +M+ +G YF+ A V+ LEFW+SL+ H Sbjct: 180 TKDDTYGLMIPSTGYPYWMFQALAIQNGKEVMSGDGLTTYFDDQAVVDTLEFWKSLSGEH 239 Query: 244 KVSPAGAIEWGTLRQAFVQGQTAMMWHTTGNLTAVKKEAKFDFGVAMLPANKQPGSPVGG 303 + P G +EWGTLRQAF++GQTAMMWH+TGNLTAVK AKFDFGVA LPAN + GSP GG Sbjct: 240 GIMPTGTVEWGTLRQAFLEGQTAMMWHSTGNLTAVKNNAKFDFGVAELPANVRLGSPTGG 299 Query: 304 GNFYLFKGSSPAQQAASVNFVRWMTAPERAAQWSIATGYVGTSPASYNTPALRDYAKTFP 363 GNFYLFK ++ ++AA++ +++MT+PE+AA WSIATGY+G SPA+Y T AL+ Y + FP Sbjct: 300 GNFYLFKDTTDEEKAAALKLMQFMTSPEQAAAWSIATGYMGVSPAAYETEALKAYTEAFP 359 Query: 364 QALVARDQLAVAIPEFSTEQTARVREALSNAVQAALTGTKTSKQALDEAQATAERLLKPY 423 ALVAR+QL A+ EFST +TARVR+ L++A+Q+ALTG+K + AL EAQA AERLL+ Y Sbjct: 360 PALVARNQLENAVAEFSTFETARVRDGLNSAIQSALTGSKEAADALGEAQAAAERLLRDY 419 Query: 424 R 424 + Sbjct: 420 K 420 >A3JVN8.1 A3JVN8_9RHOB Probable extracellular solute-binding protein Length = 422 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 260/421 (61%), Positives = 327/421 (77%) Query: 4 KLIKKTALAALFASALTASSMASAATELTMYYPIAVGGPLTDVIDGMINDFQKSNPDIKV 63 KL + L + A A + ASA TELTMYYPIAVGG LT+V+DG++ DF+ +NPDI V Sbjct: 2 KLFSTSGLGLVTAMATGLAVSASADTELTMYYPIAVGGALTEVVDGIVADFEAANPDISV 61 Query: 64 KAVYSGNYDETRVRALSAIKGGQPAQLSVLGALDTYDLIDQNLIEPFDKVATSAEDKAWL 123 A+YSGNYD+TRVRALSA+ G+PAQL+V+ ++D YDLI+Q+LI PF+ VAT+ DK WL Sbjct: 62 NAIYSGNYDDTRVRALSALASGEPAQLAVMFSIDAYDLIEQDLILPFEDVATTDADKEWL 121 Query: 124 QSFYPGLMANGTIGGHVWGIPFQRSTIVMFYNKDMFRAAGLNPDAPPKTWKEMLAAATKL 183 SFYP LMANG I G WGIPFQRSTIV +YNKD+FRAAGL+P+APP TW EM+ L Sbjct: 122 GSFYPALMANGIIEGKTWGIPFQRSTIVAYYNKDLFRAAGLDPEAPPTTWDEMIEMGKAL 181 Query: 184 TGKDKFGLMIPSTGYPYWMFQAFAIQNGVSLMNKEGTQVYFNTPAAVEALEFWRSLAATH 243 T +D +GLMIPSTGYPYWMFQA AIQNG +M+ +G YF+ VE LEFW+SL+ H Sbjct: 182 TNEDTYGLMIPSTGYPYWMFQALAIQNGKEVMSDDGLTTYFDDADVVETLEFWQSLSGEH 241 Query: 244 KVSPAGAIEWGTLRQAFVQGQTAMMWHTTGNLTAVKKEAKFDFGVAMLPANKQPGSPVGG 303 + P G +EWGTLRQAF++GQTAMMWH+TGNLT VKK A FDFGVA LP N + GSP GG Sbjct: 242 GIMPNGTVEWGTLRQAFLEGQTAMMWHSTGNLTTVKKNASFDFGVAELPGNVRLGSPTGG 301 Query: 304 GNFYLFKGSSPAQQAASVNFVRWMTAPERAAQWSIATGYVGTSPASYNTPALRDYAKTFP 363 GNFY+FK +S ++AA++ +++MT+PE+AA WSI TGY+G SPA+Y T AL+ Y FP Sbjct: 302 GNFYMFKDTSDEERAAALKLMQFMTSPEQAAAWSIGTGYMGVSPAAYETEALQAYVADFP 361 Query: 364 QALVARDQLAVAIPEFSTEQTARVREALSNAVQAALTGTKTSKQALDEAQATAERLLKPY 423 ALVAR+QL A+ EFST +TARVR+ L+NA+Q+ALTG+K+++ AL EAQA AERLL+ Y Sbjct: 362 PALVARNQLENAVAEFSTFETARVRDGLNNAIQSALTGSKSAEDALSEAQAKAERLLRAY 421 Query: 424 R 424 + Sbjct: 422 Q 422 >Q0FFW7.1 Q0FFW7_9RHOB Probable extracellular solute-binding protein Length = 417 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 257/396 (64%), Positives = 315/396 (79%), Gaps = 3/396 (0%) Query: 29 TELTMYYPIAVGGPLTDVIDGMINDFQKSNPDIKVKAVYSGNYDETRVRALSAIKGGQPA 88 TELTMYYPIAVGG LT V+DG++ DF+ NPDIKV AVYSGNYD+TRVRALSA+ G+ A Sbjct: 25 TELTMYYPIAVGGSLTQVVDGIVADFEAENPDIKVNAVYSGNYDDTRVRALSALNSGEGA 84 Query: 89 QLSVLGALDTYDLIDQNLIEPFDKVATSAEDKAWLQSFYPGLMANGTIGGHVWGIPFQRS 148 QL+V+ ++D YDLI+Q+LI PFD + + D AWL SFYP LMANGTI G WGIPFQRS Sbjct: 85 QLAVMFSIDAYDLIEQDLILPFDDLVS---DPAWLNSFYPALMANGTIEGKTWGIPFQRS 141 Query: 149 TIVMFYNKDMFRAAGLNPDAPPKTWKEMLAAATKLTGKDKFGLMIPSTGYPYWMFQAFAI 208 TIV +YNKD FRAAGL+P+APP TW E+++A LT D +GLMIPSTGYPYWMFQA AI Sbjct: 142 TIVAYYNKDQFRAAGLDPEAPPTTWDELISAGKALTNDDTYGLMIPSTGYPYWMFQALAI 201 Query: 209 QNGVSLMNKEGTQVYFNTPAAVEALEFWRSLAATHKVSPAGAIEWGTLRQAFVQGQTAMM 268 QNG +M+ +G YF+ A V+ L+FW+SL+ H + P G +EWGTLRQAF++GQT+MM Sbjct: 202 QNGKEVMSGDGLNTYFDDSAVVDTLDFWKSLSTDHGIMPTGTVEWGTLRQAFLEGQTSMM 261 Query: 269 WHTTGNLTAVKKEAKFDFGVAMLPANKQPGSPVGGGNFYLFKGSSPAQQAASVNFVRWMT 328 WH+TGNLTAVKK A FDFGVA LPAN + GSP GGGNFY+FK ++ +QAAS+ + +MT Sbjct: 262 WHSTGNLTAVKKGASFDFGVAELPANVRKGSPTGGGNFYIFKDTTAEEQAASLKLIEFMT 321 Query: 329 APERAAQWSIATGYVGTSPASYNTPALRDYAKTFPQALVARDQLAVAIPEFSTEQTARVR 388 +PE+AA WSIATGY+G SPA+Y T AL+ Y K FP ALVAR+QL A+ EFST +TARVR Sbjct: 322 SPEQAAAWSIATGYMGVSPAAYETDALKAYTKEFPPALVARNQLENAVAEFSTFETARVR 381 Query: 389 EALSNAVQAALTGTKTSKQALDEAQATAERLLKPYR 424 + L+NA+Q+ALTG K+S AL EAQ+ AERLLK YR Sbjct: 382 DGLNNAIQSALTGAKSSADALGEAQSAAERLLKAYR 417 >B5J9Q8.1 B5J9Q8_9RHOB Bacterial extracellular solute-binding protein, putative Length = 419 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 262/421 (62%), Positives = 323/421 (76%), Gaps = 3/421 (0%) Query: 4 KLIKKTALAALFASALTASSMASAATELTMYYPIAVGGPLTDVIDGMINDFQKSNPDIKV 63 KL TAL A A+T ASA TELTMYYPIAVGG LT V+DG++ DF+ +NPDI V Sbjct: 2 KLFSTTALGLATAMAVTT---ASAQTELTMYYPIAVGGSLTQVVDGIVADFEAANPDIDV 58 Query: 64 KAVYSGNYDETRVRALSAIKGGQPAQLSVLGALDTYDLIDQNLIEPFDKVATSAEDKAWL 123 A+YSGNYD+TRVRALSA+ G+ AQL+V+ ++D YDLI+Q LI PF++VAT+ DK WL Sbjct: 59 TAIYSGNYDDTRVRALSALASGEAAQLAVMFSIDAYDLIEQELIVPFEEVATTDADKEWL 118 Query: 124 QSFYPGLMANGTIGGHVWGIPFQRSTIVMFYNKDMFRAAGLNPDAPPKTWKEMLAAATKL 183 SFYP LMANG I G WGIPFQRSTIV +YNKD+FRAAGL+P+APP TW EM+ L Sbjct: 119 NSFYPALMANGQIEGQTWGIPFQRSTIVAYYNKDLFRAAGLDPEAPPTTWDEMIEMGKAL 178 Query: 184 TGKDKFGLMIPSTGYPYWMFQAFAIQNGVSLMNKEGTQVYFNTPAAVEALEFWRSLAATH 243 T D +GLMIPSTGYPYWMFQA AIQNG +M+ +G YF+ P +E LEFW+SL+ H Sbjct: 179 TNDDTYGLMIPSTGYPYWMFQALAIQNGKEIMSGDGLTTYFDDPTVIETLEFWQSLSGEH 238 Query: 244 KVSPAGAIEWGTLRQAFVQGQTAMMWHTTGNLTAVKKEAKFDFGVAMLPANKQPGSPVGG 303 + P G +EWGTLRQAF++GQTAMMWH+TGNLTAVK A FDFGVA LP N + GSP GG Sbjct: 239 GIMPTGTVEWGTLRQAFLEGQTAMMWHSTGNLTAVKNGASFDFGVAELPGNVRLGSPTGG 298 Query: 304 GNFYLFKGSSPAQQAASVNFVRWMTAPERAAQWSIATGYVGTSPASYNTPALRDYAKTFP 363 GNFYLF+ ++ ++AA++ +++MTAPE+AAQWSIATGY+G SPA+Y T AL+ Y FP Sbjct: 299 GNFYLFQDTTEEERAAALKLMQFMTAPEQAAQWSIATGYMGVSPAAYETEALQAYVAEFP 358 Query: 364 QALVARDQLAVAIPEFSTEQTARVREALSNAVQAALTGTKTSKQALDEAQATAERLLKPY 423 ALVAR+QL A+ EFST +TARVR+ L++A+Q+ALTG K +AL EAQA A RLL Y Sbjct: 359 PALVARNQLENAVAEFSTFETARVRDGLNSAIQSALTGAKEPAEALGEAQAAAVRLLSDY 418 Query: 424 R 424 + Sbjct: 419 Q 419 >A3W659.1 A3W659_9RHOB Probable extracellular solute-binding protein Length = 418 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 254/399 (63%), Positives = 319/399 (79%), Gaps = 2/399 (0%) Query: 26 SAATELTMYYPIAVGGPLTDVIDGMINDFQKSNPDIKVKAVYSGNYDETRVRALSAIKGG 85 +A TELTMYYPIAVGG LT+V+DG++ F+++NPDIKV A+YSGNYD+TRVRALSA+ G Sbjct: 22 AAQTELTMYYPIAVGGALTEVVDGIVAKFEEANPDIKVNAIYSGNYDDTRVRALSALASG 81 Query: 86 QPAQLSVLGALDTYDLIDQNLIEPFDKVATSAEDKAWLQSFYPGLMANGTIGGHVWGIPF 145 +PAQL+V+ ++D YDLI+Q I F+ + D+ WL SFYP LMANG I G WGIPF Sbjct: 82 EPAQLAVMFSIDAYDLIEQEKIVAFEDI--EGVDQGWLDSFYPALMANGRIEGKTWGIPF 139 Query: 146 QRSTIVMFYNKDMFRAAGLNPDAPPKTWKEMLAAATKLTGKDKFGLMIPSTGYPYWMFQA 205 QRSTIV +YNKDMFRAAGL+P+APP +W EM++ LT +GLMIPSTGYPYWMFQA Sbjct: 140 QRSTIVAYYNKDMFRAAGLDPEAPPASWDEMVSMGKALTKDGTYGLMIPSTGYPYWMFQA 199 Query: 206 FAIQNGVSLMNKEGTQVYFNTPAAVEALEFWRSLAATHKVSPAGAIEWGTLRQAFVQGQT 265 AIQNG LM+ +G + YF+ PA VE +EFW+SL+ H + P G +EWGTLRQAF++GQT Sbjct: 200 LAIQNGKELMSGDGLETYFDDPAVVETMEFWKSLSTEHGIMPEGTVEWGTLRQAFLEGQT 259 Query: 266 AMMWHTTGNLTAVKKEAKFDFGVAMLPANKQPGSPVGGGNFYLFKGSSPAQQAASVNFVR 325 AMMWH+TGNLTAVK EAKFDFGV++LPAN++PGSP GGGNFY+F+ ++ ++AA++ + Sbjct: 260 AMMWHSTGNLTAVKNEAKFDFGVSVLPANERPGSPTGGGNFYVFEDTTDEERAAALKLIE 319 Query: 326 WMTAPERAAQWSIATGYVGTSPASYNTPALRDYAKTFPQALVARDQLAVAIPEFSTEQTA 385 +MTAPE+AA+WSIATGY+G SPASY T AL+ Y FP ALVAR+QL A+ EFST +TA Sbjct: 320 FMTAPEQAAEWSIATGYMGVSPASYETDALKAYTAEFPPALVARNQLENAVAEFSTFETA 379 Query: 386 RVREALSNAVQAALTGTKTSKQALDEAQATAERLLKPYR 424 RVR+ L+NA+QAALTG+K+ AL EAQ AERLLK YR Sbjct: 380 RVRDGLNNAIQAALTGSKSPADALAEAQDAAERLLKDYR 418