BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0047.p         (169 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q0FFW5.1 Q0FFW5_9RHOB ABC transporter, permease protein               283   8e-75
A6DW80.1 A6DW80_9RHOB Inner membrane component of binding-protei...   282   1e-74
A3W657.1 A3W657_9RHOB Inner membrane component of binding-protei...   282   1e-74
Q162P4.1 Q162P4_ROSDO Inner membrane component of binding-protei...   281   2e-74
A9H110.1 A9H110_9RHOB Inner membrane component of binding-protei...   281   2e-74

>Q0FFW5.1 Q0FFW5_9RHOB ABC transporter, permease protein
          Length = 269

 Score =  283 bits (723), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 134/169 (79%), Positives = 156/169 (92%)

Query: 1   VFVLVLPQLFVLPEILIVENYAMVTRLGLFDTPFGMAVPYMASAFGIFLLRQAFMQIPRE 60
           VF+LVL QLF+LPE+LIVENYAMV+RLGLFD+ FG+ +PYMASAFGIFL+RQ+F  +P E
Sbjct: 101 VFILVLMQLFILPEVLIVENYAMVSRLGLFDSLFGVGMPYMASAFGIFLMRQSFKSVPIE 160

Query: 61  LEEAARIEGCGWFGVLWRVYVPAAKPVYLAYALVSVATHWNNFLWPLIVTNSPATRPLTV 120
           L EAARIEGCG  G+LWRVYVP AKP YLAYALVSV+THWNNFLWPLIVTNSP TRPLTV
Sbjct: 161 LHEAARIEGCGLLGILWRVYVPLAKPTYLAYALVSVSTHWNNFLWPLIVTNSPDTRPLTV 220

Query: 121 GLSLFGAPESGVNISIISAATLVAIAPLMIGFLVFQRQFIQAFLRAGIR 169
           GLS+FGAPE+GV+ISIISAAT++++APL+I FLVFQRQF+QAFLRAGI+
Sbjct: 221 GLSIFGAPENGVDISIISAATMMSVAPLLIAFLVFQRQFVQAFLRAGIK 269


>A6DW80.1 A6DW80_9RHOB Inner membrane component of binding-protein-dependent
           transport system
          Length = 269

 Score =  282 bits (721), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/169 (78%), Positives = 155/169 (91%)

Query: 1   VFVLVLPQLFVLPEILIVENYAMVTRLGLFDTPFGMAVPYMASAFGIFLLRQAFMQIPRE 60
           VF+LVL QLF+LPE+LIVENY MV+RLGLFDT  G+ +PYMASAFGIFL+RQAF  +P E
Sbjct: 101 VFLLVLMQLFILPEVLIVENYVMVSRLGLFDTILGVGMPYMASAFGIFLMRQAFKGVPIE 160

Query: 61  LEEAARIEGCGWFGVLWRVYVPAAKPVYLAYALVSVATHWNNFLWPLIVTNSPATRPLTV 120
           L EAAR+EGCGWFG+LWRVYVP A+P YLAYALVSV+THWNNFLWPLIVTNSP TRPLTV
Sbjct: 161 LHEAARVEGCGWFGILWRVYVPLARPTYLAYALVSVSTHWNNFLWPLIVTNSPDTRPLTV 220

Query: 121 GLSLFGAPESGVNISIISAATLVAIAPLMIGFLVFQRQFIQAFLRAGIR 169
           GLS+FGAPE+GVNIS+ISAAT++++APL++ FLVFQRQF+QAFLR GI+
Sbjct: 221 GLSIFGAPENGVNISVISAATILSVAPLLVAFLVFQRQFVQAFLRTGIK 269


>A3W657.1 A3W657_9RHOB Inner membrane component of binding-protein-dependent
           transport system
          Length = 269

 Score =  282 bits (721), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 155/169 (91%)

Query: 1   VFVLVLPQLFVLPEILIVENYAMVTRLGLFDTPFGMAVPYMASAFGIFLLRQAFMQIPRE 60
           VF+LVL QLF+LPE+LIVENY M++RLGLFDT  G+ +PYMASAFGIFL+RQAF  +P E
Sbjct: 101 VFILVLMQLFILPEVLIVENYVMISRLGLFDTILGVGMPYMASAFGIFLMRQAFKGVPIE 160

Query: 61  LEEAARIEGCGWFGVLWRVYVPAAKPVYLAYALVSVATHWNNFLWPLIVTNSPATRPLTV 120
           L +AAR+EGCGWFG+LWRVYVP A+P YLAYALVSV+THWNNFLWPLIVTNSP TRPLTV
Sbjct: 161 LHDAARVEGCGWFGILWRVYVPLARPTYLAYALVSVSTHWNNFLWPLIVTNSPDTRPLTV 220

Query: 121 GLSLFGAPESGVNISIISAATLVAIAPLMIGFLVFQRQFIQAFLRAGIR 169
           GLS+FGAPE+GVNIS+ISAATL+++APL++ FLVFQRQF+QAFLR GI+
Sbjct: 221 GLSIFGAPENGVNISVISAATLMSVAPLLVAFLVFQRQFVQAFLRTGIK 269


>Q162P4.1 Q162P4_ROSDO Inner membrane component of binding-protein-dependent
           transport system
          Length = 269

 Score =  281 bits (720), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 155/169 (91%)

Query: 1   VFVLVLPQLFVLPEILIVENYAMVTRLGLFDTPFGMAVPYMASAFGIFLLRQAFMQIPRE 60
           VF+LVL QLF+LPE+LIVENYAMV+RLGLFDT  G+ +PYMASAFGIFL+RQAF  +P E
Sbjct: 101 VFILVLMQLFILPEVLIVENYAMVSRLGLFDTILGVGMPYMASAFGIFLMRQAFKGVPIE 160

Query: 61  LEEAARIEGCGWFGVLWRVYVPAAKPVYLAYALVSVATHWNNFLWPLIVTNSPATRPLTV 120
           L EAARIEGCG  G+LWRVYVP AKP YLAYALVSV+THWNNFLWPLIVTNSP TRPLTV
Sbjct: 161 LHEAARIEGCGLLGILWRVYVPLAKPTYLAYALVSVSTHWNNFLWPLIVTNSPDTRPLTV 220

Query: 121 GLSLFGAPESGVNISIISAATLVAIAPLMIGFLVFQRQFIQAFLRAGIR 169
           GLS+FGAPE+GV+ISIISAATL+++APL+I FL+FQRQF+QAFLRAGI+
Sbjct: 221 GLSIFGAPENGVDISIISAATLMSVAPLLIAFLIFQRQFVQAFLRAGIK 269


>A9H110.1 A9H110_9RHOB Inner membrane component of binding-protein-dependent
           transport system
          Length = 269

 Score =  281 bits (720), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 155/169 (91%)

Query: 1   VFVLVLPQLFVLPEILIVENYAMVTRLGLFDTPFGMAVPYMASAFGIFLLRQAFMQIPRE 60
           VF+LVL QLF+LPE+LIVENYAMV+RLGLFDT  G+ +PYMASAFGIFL+RQAF  +P E
Sbjct: 101 VFILVLMQLFILPEVLIVENYAMVSRLGLFDTILGVGMPYMASAFGIFLMRQAFKGVPIE 160

Query: 61  LEEAARIEGCGWFGVLWRVYVPAAKPVYLAYALVSVATHWNNFLWPLIVTNSPATRPLTV 120
           L EAARIEGCG  G+LWRVYVP AKP YLAYALVSV+THWNNFLWPLIVTNSP TRPLTV
Sbjct: 161 LHEAARIEGCGLLGILWRVYVPLAKPTYLAYALVSVSTHWNNFLWPLIVTNSPDTRPLTV 220

Query: 121 GLSLFGAPESGVNISIISAATLVAIAPLMIGFLVFQRQFIQAFLRAGIR 169
           GLS+FGAPE+GV+ISIISAATL+++APL+I FL+FQRQF+QAFLRAGI+
Sbjct: 221 GLSIFGAPENGVDISIISAATLMSVAPLLIAFLIFQRQFVQAFLRAGIK 269