BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0042.p (340 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWK3.1 D8IWK3_HERSS ABC-type nitrate/sulfonate/bicarbonate tra... 582 e-164 A8I2X3.1 A8I2X3_AZOC5 Putative periplasmic substrate-binding tra... 426 e-117 B8IU60.1 B8IU60_METNO Putative periplasmic substrate-binding tra... 416 e-114 B0UN99.1 B0UN99_METS4 Putative periplasmic substrate-binding tra... 415 e-114 A5EQZ3.1 A5EQZ3_BRASB Putative periplasmic substrate-binding sub... 415 e-114 >D8IWK3.1 D8IWK3_HERSS ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component protein Length = 341 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 284/338 (84%), Positives = 304/338 (89%), Gaps = 2/338 (0%) Query: 3 RRHFSKLMTAATLGLSMLAASIPARAEAPVVRLSHGYGLLYLPLMVIRDQGLIEKHAKAA 62 RR F+ LM A+ L LS ++ + A AEA VR+SHGYGLLYLPLMVIRDQ L+EKHAKA Sbjct: 6 RRTFTSLMIASALALSGVSGT--AHAEAQEVRISHGYGLLYLPLMVIRDQNLVEKHAKAM 63 Query: 63 GLGDVKTNWVLLDGGNVINDAMLAGNLDIAGTGAPGFITLWSKARGIPRSEVTGLGALST 122 GLG+VKT WVLLDGGNVINDAMLAGNLDIAGTGAPGF+TLWSKA GIPRSEV GLGALST Sbjct: 64 GLGEVKTKWVLLDGGNVINDAMLAGNLDIAGTGAPGFVTLWSKAHGIPRSEVVGLGALST 123 Query: 123 SPLWLNTNNPNVKSLKDFTSKDKIAIPGIKTSLSAVLLQMAVAKTFGIENYAKLDPLTVS 182 SPLWLNTNNPNVKSLKDFT KDKIAIPGIKTSLSAVLLQMA AKTFGIENYAKLDPLTVS Sbjct: 124 SPLWLNTNNPNVKSLKDFTPKDKIAIPGIKTSLSAVLLQMAAAKTFGIENYAKLDPLTVS 183 Query: 183 LSHPEALGSLLSGKTEITGHFTSPPFSYQEVKDPKIRRVLNSSDVLGHITIDVVFALKQF 242 LSHPEA+ SL+SGKTEIT HFTSPPFSYQE K P I RVLNS+DVLGHITIDVVFALK F Sbjct: 184 LSHPEAMASLVSGKTEITAHFTSPPFSYQEAKAPGITRVLNSTDVLGHITIDVVFALKSF 243 Query: 243 TEKNPKLTQAFMEAQEEANAYIAKNRKGAAETFLRVSKMKLTQDEVEKMLADPDTQFTTT 302 T+KNPKLTQAFM AQEEANAYIAKNRKGAAE FLRVSK+KL Q+EVE+MLADP T+FT+T Sbjct: 244 TDKNPKLTQAFMAAQEEANAYIAKNRKGAAEIFLRVSKLKLPQEEVEQMLADPGTEFTST 303 Query: 303 PEDIMQYVVFMDKAGTIKTKPAVWSDLFVPAFKTRKGS 340 P DIMQYVVFM KAGTIKTKPAVW ++FVPAFK RKGS Sbjct: 304 PVDIMQYVVFMSKAGTIKTKPAVWHEMFVPAFKERKGS 341 >A8I2X3.1 A8I2X3_AZOC5 Putative periplasmic substrate-binding transmembrane protein Length = 338 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 198/312 (63%), Positives = 250/312 (80%) Query: 29 EAPVVRLSHGYGLLYLPLMVIRDQGLIEKHAKAAGLGDVKTNWVLLDGGNVINDAMLAGN 88 E VR+S GYG+LYLPL+V+ DQ L+EK A+ AGLG +K W++LDGGNVINDAM+AG+ Sbjct: 27 EVKEVRISKGYGILYLPLIVMEDQKLLEKQAEKAGLGPLKVTWLMLDGGNVINDAMMAGS 86 Query: 89 LDIAGTGAPGFITLWSKARGIPRSEVTGLGALSTSPLWLNTNNPNVKSLKDFTSKDKIAI 148 LD AGTGAPGFITLW+KA+GIP EV G+ LS + LW+NTN+PN+ SLKDF + DKIA+ Sbjct: 87 LDFAGTGAPGFITLWAKAKGIPNVEVVGISGLSATALWMNTNSPNINSLKDFKAGDKIAL 146 Query: 149 PGIKTSLSAVLLQMAVAKTFGIENYAKLDPLTVSLSHPEALGSLLSGKTEITGHFTSPPF 208 PGIKTSLSAV+LQM A FG ENYAKLDPLTVSL HPEAL +L+ GKTEI HFTSPPF Sbjct: 147 PGIKTSLSAVVLQMMAAHEFGRENYAKLDPLTVSLPHPEALAALVGGKTEINAHFTSPPF 206 Query: 209 SYQEVKDPKIRRVLNSSDVLGHITIDVVFALKQFTEKNPKLTQAFMEAQEEANAYIAKNR 268 SY E+KDPK+ RV NS DV+G IT+DV FA K+F + NPK+TQAF++A +EA+A+IA N+ Sbjct: 207 SYLELKDPKVHRVANSVDVIGPITLDVTFAPKKFVDANPKVTQAFLDALDEADAFIAANK 266 Query: 269 KGAAETFLRVSKMKLTQDEVEKMLADPDTQFTTTPEDIMQYVVFMDKAGTIKTKPAVWSD 328 + AAE ++R +K+K + +E+ +ML D DT+F+TTP+ IMQ+ FM AG+IK KP WSD Sbjct: 267 QAAAEIYVRNAKVKTSVEEILEMLNDKDTRFSTTPDGIMQFADFMHAAGSIKVKPKAWSD 326 Query: 329 LFVPAFKTRKGS 340 LF+P +RKGS Sbjct: 327 LFIPQLASRKGS 338 >B8IU60.1 B8IU60_METNO Putative periplasmic substrate-binding transmembrane protein Length = 338 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/318 (61%), Positives = 246/318 (77%) Query: 23 SIPARAEAPVVRLSHGYGLLYLPLMVIRDQGLIEKHAKAAGLGDVKTNWVLLDGGNVIND 82 ++P RAE VR+S GYG+LYLPL V++++ +E A AGLGDVK W+ LDGGNVIND Sbjct: 21 TMPLRAEVSEVRISKGYGILYLPLFVMQEKKFLEAQAAKAGLGDVKVTWLTLDGGNVIND 80 Query: 83 AMLAGNLDIAGTGAPGFITLWSKARGIPRSEVTGLGALSTSPLWLNTNNPNVKSLKDFTS 142 AM+AG+LDIAGTGAPGF+ LWSK RG P++EV G+ +ST+ L LN N +KSL DFT Sbjct: 81 AMIAGSLDIAGTGAPGFLALWSKGRGSPKTEVIGVSGMSTTALDLNVNKAEIKSLADFTP 140 Query: 143 KDKIAIPGIKTSLSAVLLQMAVAKTFGIENYAKLDPLTVSLSHPEALGSLLSGKTEITGH 202 KDKIAIPGIKTSL+AV+LQMAVAK FG ENY KLD TV L HPEA+ +LLSGKTEI H Sbjct: 141 KDKIAIPGIKTSLAAVVLQMAVAKQFGPENYGKLDASTVGLPHPEAVAALLSGKTEIVAH 200 Query: 203 FTSPPFSYQEVKDPKIRRVLNSSDVLGHITIDVVFALKQFTEKNPKLTQAFMEAQEEANA 262 F SPPF+ E DPKIR +L +S+V G IT+DVVFALK+FTE NPKLTQAF++A ++ANA Sbjct: 201 FASPPFTQVERADPKIRTILKASEVFGPITLDVVFALKRFTEANPKLTQAFLDALDQANA 260 Query: 263 YIAKNRKGAAETFLRVSKMKLTQDEVEKMLADPDTQFTTTPEDIMQYVVFMDKAGTIKTK 322 +I +N+ AE F R SK+K+T +EV ML DPD++F++TP IM++ FM + G IKTK Sbjct: 261 FIQENKAETAEIFARASKVKVTPEEVRPMLDDPDSRFSSTPTGIMEFATFMHRVGIIKTK 320 Query: 323 PAVWSDLFVPAFKTRKGS 340 PA W+DLF+PA + R GS Sbjct: 321 PAAWTDLFIPALRERAGS 338 >B0UN99.1 B0UN99_METS4 Putative periplasmic substrate-binding transmembrane protein Length = 338 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/316 (61%), Positives = 245/316 (77%) Query: 25 PARAEAPVVRLSHGYGLLYLPLMVIRDQGLIEKHAKAAGLGDVKTNWVLLDGGNVINDAM 84 P RAE VR+S GYG+LYLPL V++++ +E A AGLGDVK W+ LDGGNVINDAM Sbjct: 23 PLRAEVSEVRISKGYGVLYLPLFVMQEKKFLEAQAARAGLGDVKVTWLTLDGGNVINDAM 82 Query: 85 LAGNLDIAGTGAPGFITLWSKARGIPRSEVTGLGALSTSPLWLNTNNPNVKSLKDFTSKD 144 +AG+LDIAGTGAPGF+ LWSK RG P++EV G+ +ST+ L LN N P +KSL DFT KD Sbjct: 83 IAGSLDIAGTGAPGFLALWSKGRGSPKTEVIGVSGMSTTALDLNVNKPEIKSLADFTPKD 142 Query: 145 KIAIPGIKTSLSAVLLQMAVAKTFGIENYAKLDPLTVSLSHPEALGSLLSGKTEITGHFT 204 KIAIPGIKTSL+AV+LQMAVAK FG ENY KLD TV L HPEA+ +LLSG+TEI HF Sbjct: 143 KIAIPGIKTSLAAVVLQMAVAKQFGPENYGKLDSSTVGLPHPEAVAALLSGRTEIVAHFA 202 Query: 205 SPPFSYQEVKDPKIRRVLNSSDVLGHITIDVVFALKQFTEKNPKLTQAFMEAQEEANAYI 264 SPPF+ E DPK+R +L +S++ G IT+DVVFAL++FTE+NPK+TQAF++A +++ A+I Sbjct: 203 SPPFTQVERADPKVRTILKASELFGPITLDVVFALRRFTEQNPKMTQAFLDALDQSCAFI 262 Query: 265 AKNRKGAAETFLRVSKMKLTQDEVEKMLADPDTQFTTTPEDIMQYVVFMDKAGTIKTKPA 324 N+ AE F R SK+K+T +EV +ML DPD++F+ TP IM++ FM +AG IKTKPA Sbjct: 263 KDNKAETAEIFARASKVKVTPEEVAQMLEDPDSRFSATPNGIMEFATFMHRAGIIKTKPA 322 Query: 325 VWSDLFVPAFKTRKGS 340 WSDLF+PA + R GS Sbjct: 323 TWSDLFIPALRERAGS 338 >A5EQZ3.1 A5EQZ3_BRASB Putative periplasmic substrate-binding subunit (ABC transporter) Length = 338 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 196/313 (62%), Positives = 244/313 (77%) Query: 28 AEAPVVRLSHGYGLLYLPLMVIRDQGLIEKHAKAAGLGDVKTNWVLLDGGNVINDAMLAG 87 AE VRLS GYG+LYLPL+V+ DQ L+EKHA+ AGLG K +W LLDGGN+INDAM+AG Sbjct: 26 AEVKEVRLSKGYGILYLPLIVMEDQKLMEKHAEKAGLGPFKVSWQLLDGGNIINDAMMAG 85 Query: 88 NLDIAGTGAPGFITLWSKARGIPRSEVTGLGALSTSPLWLNTNNPNVKSLKDFTSKDKIA 147 +LDIAGTGAPGFITLW+KA+GIP EV G+ LS++ LW+NTNNP +KSLKDF + DKIA Sbjct: 86 SLDIAGTGAPGFITLWAKAKGIPAVEVVGVSGLSSTSLWMNTNNPEIKSLKDFKAGDKIA 145 Query: 148 IPGIKTSLSAVLLQMAVAKTFGIENYAKLDPLTVSLSHPEALGSLLSGKTEITGHFTSPP 207 +PGIKTSLSAV+LQM A FG ENYAKLDP+TV L HPEA+ +L+SGKTEIT HFTSPP Sbjct: 146 LPGIKTSLSAVMLQMMAAHEFGKENYAKLDPMTVGLPHPEAVAALISGKTEITAHFTSPP 205 Query: 208 FSYQEVKDPKIRRVLNSSDVLGHITIDVVFALKQFTEKNPKLTQAFMEAQEEANAYIAKN 267 FSY E+KD KI RV NS+DVLG +T+DVVFA K+F + NPK+ QAF++A +EA IA + Sbjct: 206 FSYIELKDSKIHRVANSADVLGRLTMDVVFAPKRFVDANPKVVQAFLDALDEACTLIAND 265 Query: 268 RKGAAETFLRVSKMKLTQDEVEKMLADPDTQFTTTPEDIMQYVVFMDKAGTIKTKPAVWS 327 + AAE + R +K+K T++EV +ML D DT F+ TPE +++ FM G+IK KPA W Sbjct: 266 KAAAAEIYARTAKVKTTKEEVLEMLQDKDTWFSATPEGVLKIAEFMHGVGSIKVKPANWQ 325 Query: 328 DLFVPAFKTRKGS 340 D+FV + R GS Sbjct: 326 DMFVTQLRDRNGS 338