BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0037.0038.p         (214 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IWK7.1 D8IWK7_HERSS Transmembrane sensor histidine kinase tran...   261   3e-68
A5EQZ7.1 A5EQZ7_BRASB Putative Two-component system histidine ki...   123   2e-26
B8IU64.1 B8IU64_METNO Histidine kinase                                122   4e-26
A4YN24.1 A4YN24_BRASO Putative Two-component system histidine ki...   122   4e-26
A8I2Y3.1 A8I2Y3_AZOC5 ATP-binding protein                             113   1e-23

>D8IWK7.1 D8IWK7_HERSS Transmembrane sensor histidine kinase transcription
           regulator protein
          Length = 468

 Score =  261 bits (668), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 123/163 (75%), Positives = 140/163 (85%)

Query: 2   IVAGRSLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQ 61
           ++AGRSLYTRLV+RVG VL +S+A LLIAIWISTQ AA EAYDRIL+GSALQIAENTWY 
Sbjct: 8   VIAGRSLYTRLVIRVGAVLLVSAAALLIAIWISTQFAAREAYDRILAGSALQIAENTWYD 67

Query: 62  NGAVNVDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAY 121
           +G VNVDVPLAA SML  GD   Y V DP GR +AGD +F+PEIPW +LE+GPLL+DG Y
Sbjct: 68  HGEVNVDVPLAALSMLGTGDHAIYAVFDPRGRVIAGDAEFRPEIPWQELEQGPLLRDGQY 127

Query: 122 LDTPVRMAVIGRRMPVAGAHPWAVIVLAQTNNARMSFAKSVGT 164
           L TPVRMA+IGRRMPV G HPWAVIVLAQTNNARMSFA+S+G+
Sbjct: 128 LGTPVRMAIIGRRMPVEGPHPWAVIVLAQTNNARMSFAQSLGS 170


>A5EQZ7.1 A5EQZ7_BRASB Putative Two-component system histidine kinase
          Length = 462

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 93/152 (61%)

Query: 7   SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66
           SL  RL++ +G +L + + VL +A W     AA +AYDR+L+G A+QIAEN + Q G V 
Sbjct: 13  SLRARLLIAIGAILTVGAIVLSLAAWQYAATAARDAYDRLLAGGAVQIAENIYMQGGVVT 72

Query: 67  VDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPV 126
           +D P AAF+ L+A D VFY V DP G  VAG  D     P   L EG +L+DG Y D PV
Sbjct: 73  LDPPAAAFATLSAYDLVFYRVTDPRGVVVAGYDDLAISAPAAALREGVVLRDGVYRDQPV 132

Query: 127 RMAVIGRRMPVAGAHPWAVIVLAQTNNARMSF 158
           R+A + RR+  A    W+ IVLAQT  AR S 
Sbjct: 133 RIAAVARRLDGAPGDGWSAIVLAQTLRARDSL 164


>B8IU64.1 B8IU64_METNO Histidine kinase
          Length = 461

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 96/162 (59%), Gaps = 3/162 (1%)

Query: 7   SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66
           SL+ RLV  +G+VLA+ +A+LL A W S +LAA++AYDR+L G+ALQIAE        + 
Sbjct: 7   SLFLRLVTVLGLVLAVGAALLLGAAWTSARLAADQAYDRLLVGAALQIAETIASDGREIT 66

Query: 67  VDVPLAAFSMLTAG--DQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDT 124
           VD P +AF  L     D++FY V+DP    + G PD    +   +L +GPLL D  +   
Sbjct: 67  VDPPFSAFETLGLAPRDRIFYKVVDPSDGLLTGSPDLAVPVDRARLGDGPLLLDATHRGE 126

Query: 125 PVRMAVIGRRMPVAGAHPWAVIVLAQTNNARMSFAKSVGTAK 166
           PVR+ V GR +P      WA +V+AQT  AR   A  + TAK
Sbjct: 127 PVRVVVAGRYVPDIPKAGWAAVVVAQTREARNGLAGDL-TAK 167


>A4YN24.1 A4YN24_BRASO Putative Two-component system histidine kinase
          Length = 468

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 95/149 (63%)

Query: 7   SLYTRLVMRVGIVLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVN 66
           SL  RL++ +G +LA+ + VL +A W     AA +AYD++L+G A+Q+AEN + Q G V 
Sbjct: 13  SLRARLLIAIGAILAVGAVVLSLAAWQYAATAARDAYDKLLAGGAVQVAENIYMQGGVVT 72

Query: 67  VDVPLAAFSMLTAGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPV 126
           +D P AAF+ L+A D VFY V DP G  VAG  D   + P + L +G +L+DG Y D PV
Sbjct: 73  LDPPAAAFATLSAYDLVFYRVTDPRGVVVAGYDDLAIQAPKSALRDGVVLRDGVYRDQPV 132

Query: 127 RMAVIGRRMPVAGAHPWAVIVLAQTNNAR 155
           R+A + RR+  A    W+ IVLAQT  AR
Sbjct: 133 RIAAVARRLDGAPGEGWSEIVLAQTVRAR 161


>A8I2Y3.1 A8I2Y3_AZOC5 ATP-binding protein
          Length = 436

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 19  VLAISSAVLLIAIWISTQLAANEAYDRILSGSALQIAENTWYQNGAVNVDVPLAAFSMLT 78
           +LA+ + +L  A W   ++AA +AYD++L G A+QIAEN + Q G V +D P AAFS L+
Sbjct: 1   MLALGALLLSFAAWEYAKVAARDAYDKLLIGGAVQIAENVYVQGGVVALDPPAAAFSTLS 60

Query: 79  AGDQVFYVVIDPDGRTVAGDPDFKPEIPWNKLEEGPLLQDGAYLDTPVRMAVIGRRMPVA 138
           A D VFY V DP G  VAG  D    +    L  G +L+DG Y   PVR+A +G+++  A
Sbjct: 61  AYDLVFYRVTDPRGVVVAGYDDLAKGVGGAALHRGVVLRDGTYQGQPVRIAALGKQLEDA 120

Query: 139 GAHPWAVIVLAQTNNARMSFAKSVGTAKI 167
           G   WA IVLAQT  AR + A  + T  +
Sbjct: 121 GGG-WAEIVLAQTMRAREALAWDLTTKAV 148