BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0018.p (195 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWL4.1 D8IWL4_HERSS AraC family transcription regulator protein 308 2e-82 B9TP36.1 B9TP36_RICCO HTH-type transcriptional regulator glxA, p... 282 2e-74 F0C3B9.1 F0C3B9_9XANT Transcriptional regulator, AraC family wit... 243 1e-62 B2JF53.1 B2JF53_BURP8 Transcriptional regulator, AraC family 239 1e-61 B2T5X9.1 B2T5X9_BURPP Transcriptional regulator, AraC family 231 5e-59 >D8IWL4.1 D8IWL4_HERSS AraC family transcription regulator protein Length = 343 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 150/194 (77%), Positives = 166/194 (85%) Query: 1 VTTHWDWALRLQQQFPAIEVDPEPIFIRQGDIWTSAGVTAGIDLALALVEQDYGHKVAIA 60 VTTHWDWA LQ+++PA++VD +PI+IRQG IWTSAGVTAGIDLALALVEQD GH AIA Sbjct: 135 VTTHWDWAQELQRRYPALQVDADPIYIRQGRIWTSAGVTAGIDLALALVEQDLGHASAIA 194 Query: 61 TARQLVMFIKRPGGQSQFSVPLVSQSSENARFAELHAWIASNLKHDLRVENLASRVNMSP 120 TARQLVMFIKRPGGQSQFS PL +QS+ RFAELHAWIA++L DL VENLA R MSP Sbjct: 195 TARQLVMFIKRPGGQSQFSTPLATQSTGAGRFAELHAWIAAHLADDLHVENLAHRAGMSP 254 Query: 121 RTFARTYVAEQGRTPAKTVEAMRLEAACRALEETDLPLKSIATETGHGEEQNLRRVFQRQ 180 RTFAR YVAE GRTPA+TVE MRLEAA RALEET LPLK IA++ G+GEEQNLRRVF RQ Sbjct: 255 RTFARLYVAETGRTPARTVELMRLEAARRALEETRLPLKRIASQAGYGEEQNLRRVFLRQ 314 Query: 181 LGVSPAQYRSRFSA 194 LGVSP QYR RF+A Sbjct: 315 LGVSPGQYRERFAA 328 >B9TP36.1 B9TP36_RICCO HTH-type transcriptional regulator glxA, putative (Fragment) Length = 244 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 132/193 (68%), Positives = 158/193 (81%) Query: 3 THWDWALRLQQQFPAIEVDPEPIFIRQGDIWTSAGVTAGIDLALALVEQDYGHKVAIATA 62 THW+W RL++ P ++VD + IFI G IWTSAGV+AGIDL LAL+E+DYGH VAI TA Sbjct: 47 THWEWVDRLRELHPQVDVDADKIFINDGAIWTSAGVSAGIDLTLALIEEDYGHHVAIETA 106 Query: 63 RQLVMFIKRPGGQSQFSVPLVSQSSENARFAELHAWIASNLKHDLRVENLASRVNMSPRT 122 RQ+VMFIKR GGQSQFSVPL +Q+ E+ RF LH W+A+NL +L V+ LA + M+PRT Sbjct: 107 RQMVMFIKRSGGQSQFSVPLAAQARESGRFDALHTWVAANLHENLTVDRLAEQAGMTPRT 166 Query: 123 FARTYVAEQGRTPAKTVEAMRLEAACRALEETDLPLKSIATETGHGEEQNLRRVFQRQLG 182 FAR+YV++ GRTPAK VEAMRLEAACRALE+T LPL++IA TG+ EEQNLRRVFQRQLG Sbjct: 167 FARSYVSQLGRTPAKMVEAMRLEAACRALEKTTLPLETIAATTGYVEEQNLRRVFQRQLG 226 Query: 183 VSPAQYRSRFSAH 195 VSP QYRSRFS H Sbjct: 227 VSPGQYRSRFSGH 239 >F0C3B9.1 F0C3B9_9XANT Transcriptional regulator, AraC family with amidase-like domain Length = 327 Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/190 (60%), Positives = 137/190 (72%) Query: 3 THWDWALRLQQQFPAIEVDPEPIFIRQGDIWTSAGVTAGIDLALALVEQDYGHKVAIATA 62 THW WA RL P I VD + IF+R G +W+SAGVTAGIDL LAL+E D+GH++AI A Sbjct: 126 THWGWADRLSNLHPGIRVDADKIFVRDGYVWSSAGVTAGIDLTLALIEDDHGHRLAIDVA 185 Query: 63 RQLVMFIKRPGGQSQFSVPLVSQSSENARFAELHAWIASNLKHDLRVENLASRVNMSPRT 122 RQLV+F+KR GGQSQFS PL +Q+S FAELH W+A+NL DLRVE LA R+ MSPRT Sbjct: 186 RQLVVFVKRSGGQSQFSAPLSAQTSAGGDFAELHGWMAANLHEDLRVETLAGRMKMSPRT 245 Query: 123 FARTYVAEQGRTPAKTVEAMRLEAACRALEETDLPLKSIATETGHGEEQNLRRVFQRQLG 182 FAR Y + G TPAK VE +R+EAA R LE + P+K IA TG +EQ LRR F R LG Sbjct: 246 FARVYRSTCGVTPAKAVETLRVEAARRLLESGNAPIKRIAALTGLSDEQTLRRTFLRVLG 305 Query: 183 VSPAQYRSRF 192 V+P YR RF Sbjct: 306 VAPGDYRDRF 315 >B2JF53.1 B2JF53_BURP8 Transcriptional regulator, AraC family Length = 363 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 124/203 (61%), Positives = 143/203 (70%), Gaps = 10/203 (4%) Query: 2 TTHWDWALRLQQQFPAIEVDPEPIFIRQ------GD----IWTSAGVTAGIDLALALVEQ 51 TTHW A RL ++F ++VD EPIFIR+ GD IWTSAGVTAGIDLALAL+++ Sbjct: 158 TTHWRDAGRLAERFARVQVDAEPIFIRELLPGRAGDDGRSIWTSAGVTAGIDLALALIQE 217 Query: 52 DYGHKVAIATARQLVMFIKRPGGQSQFSVPLVSQSSENARFAELHAWIASNLKHDLRVEN 111 DYGH VA+ AR+LV+F+KRPGGQSQFS L +Q+S F LH W+ASNL DL VE Sbjct: 218 DYGHAVAMQVARRLVVFVKRPGGQSQFSAALAAQTSAGGAFDGLHGWMASNLNGDLSVER 277 Query: 112 LASRVNMSPRTFARTYVAEQGRTPAKTVEAMRLEAACRALEETDLPLKSIATETGHGEEQ 171 LA MSPR FAR YV E GRTPAKTV AMRLEAA RAL E+ PLK IA + G G EQ Sbjct: 278 LAEEARMSPRNFARRYVDEVGRTPAKTVSAMRLEAASRALAESRRPLKRIALDCGFGSEQ 337 Query: 172 NLRRVFQRQLGVSPAQYRSRFSA 194 NLRR F R GV P YR RF++ Sbjct: 338 NLRRAFVRSFGVLPLDYRERFAS 360 >B2T5X9.1 B2T5X9_BURPP Transcriptional regulator, AraC family Length = 437 Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 122/198 (61%), Positives = 145/198 (73%), Gaps = 7/198 (3%) Query: 2 TTHWDWALRLQQQFPAIEVDPEPIFIR-----QGD--IWTSAGVTAGIDLALALVEQDYG 54 TTHW A RL Q+FP + VD +PIFIR +GD +WTSAGVTAGIDLALAL+E+D G Sbjct: 218 TTHWRDAPRLAQRFPNVHVDADPIFIRDAGRHEGDGVVWTSAGVTAGIDLALALIEEDVG 277 Query: 55 HKVAIATARQLVMFIKRPGGQSQFSVPLVSQSSENARFAELHAWIASNLKHDLRVENLAS 114 H VA+ AR+LV+F+KRPGGQSQ+S L +Q+S N F LH+W+ ++L+ DL VE LA Sbjct: 278 HAVAMQAARRLVVFMKRPGGQSQYSAALAAQASANGPFEALHSWMTAHLRDDLSVERLAE 337 Query: 115 RVNMSPRTFARTYVAEQGRTPAKTVEAMRLEAACRALEETDLPLKSIATETGHGEEQNLR 174 R MSPRTFAR YV E GRTPAKTV A+RLEAA RAL E+ PLK IA + G G EQNLR Sbjct: 338 RTRMSPRTFARRYVDEVGRTPAKTVSALRLEAASRALAESRRPLKRIALDCGFGSEQNLR 397 Query: 175 RVFQRQLGVSPAQYRSRF 192 R F R+ GV P YR RF Sbjct: 398 RAFLRRFGVLPLDYRERF 415