BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0435.p (383 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D9SG59.1 D9SG59_GALCS Transcriptional regulator, LysR family 289 6e-76 Q129E8.1 Q129E8_POLSJ Transcriptional regulator, LysR family 236 6e-60 C1DN96.1 C1DN96_AZOVD Transcriptional regulator LysR family protein 233 3e-59 C3MFE1.1 C3MFE1_RHISN Putative transcriptional regulator, LysR f... 233 4e-59 Q46VI9.1 Q46VI9_CUPPJ Regulatory protein, LysR:LysR, substrate-b... 224 2e-56 >D9SG59.1 D9SG59_GALCS Transcriptional regulator, LysR family Length = 311 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 136/213 (63%), Positives = 170/213 (79%) Query: 1 VQDGLDSIQGAIADITVNAGQPAGVLKLNTSQAFGVEYVLPLMPAFLERYPAVTPDWSLD 60 VQ GLDSIQGAIAD+ VNAGQPAG+LK++ +FG+E++LPLMPAFLERYPAVT DW D Sbjct: 69 VQGGLDSIQGAIADVMVNAGQPAGMLKVSAPLSFGMEFLLPLMPAFLERYPAVTTDWHFD 128 Query: 61 NRPQDLIAGGFDAAIGGGFDLPLGMVARELARLQIVAVASPSFMRGKRRPRDPAGLGAFP 120 NRP D IA G+DAA G GF+LP GM ARELAR+ ++AVA+P+F+ GKRRP+DP+ L Sbjct: 129 NRPVDFIADGYDAAFGAGFELPPGMKARELARVHLIAVATPAFLHGKRRPKDPSELAELA 188 Query: 121 CVAMRSPSTSRVRTLIMRNGAGAEMAAVQNPVIVLDDPSAMCHAVLLGMGIGLMAVPHAL 180 V MRS +R T +MRN +G E+AAVQ PV++++ P A+C A L G+G+GL+AVPHA Sbjct: 189 GVVMRSADNNRAITWVMRNRSGTEVAAVQKPVMIVNAPDAVCCATLQGLGVGLVAVPHAA 248 Query: 181 PHLESGTLVQLLPGWYCDVGPLSLYFASQKLLP 213 PHLESG L +LLP W+ DVGP+SLYF+SQKLLP Sbjct: 249 PHLESGALERLLPDWHSDVGPISLYFSSQKLLP 281 >Q129E8.1 Q129E8_POLSJ Transcriptional regulator, LysR family Length = 309 Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 111/216 (51%), Positives = 157/216 (72%) Query: 5 LDSIQGAIADITVNAGQPAGVLKLNTSQAFGVEYVLPLMPAFLERYPAVTPDWSLDNRPQ 64 L ++Q AIA ++ ++G P G LK++ S FG+EY++PL+PAFL+RYP + PDW +NRP Sbjct: 73 LIALQSAIAAVSSDSGDPVGSLKVSMSPTFGIEYIVPLLPAFLDRYPLIRPDWHFENRPV 132 Query: 65 DLIAGGFDAAIGGGFDLPLGMVARELARLQIVAVASPSFMRGKRRPRDPAGLGAFPCVAM 124 DLIA G+DAAIGGGF+L G+V+R LA + +VAVASP++M G++ P DPAGL F +A+ Sbjct: 133 DLIAEGYDAAIGGGFELSPGVVSRALAPIHLVAVASPAYMAGQQAPADPAGLAGFKGIAL 192 Query: 125 RSPSTSRVRTLIMRNGAGAEMAAVQNPVIVLDDPSAMCHAVLLGMGIGLMAVPHALPHLE 184 RS TSRVR +MR+ AG E+ A +V++DP+AM A LLG+G+ L+AVP LP LE Sbjct: 193 RSSGTSRVRQWVMRDAAGTEIPASLTESVVVNDPTAMRAAALLGLGVTLLAVPDVLPWLE 252 Query: 185 SGTLVQLLPGWYCDVGPLSLYFASQKLLPVPLSLYF 220 G LV+LLP WY D G +S+Y+A++ L+P ++ Sbjct: 253 RGELVRLLPRWYVDAGAISIYYATRSLMPAKTRVFI 288 >C1DN96.1 C1DN96_AZOVD Transcriptional regulator LysR family protein Length = 309 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 112/219 (51%), Positives = 151/219 (68%) Query: 1 VQDGLDSIQGAIADITVNAGQPAGVLKLNTSQAFGVEYVLPLMPAFLERYPAVTPDWSLD 60 V+ LD +Q AI+++ + G+PAGVLK++ + AFG+EY+LPL+P FL+RYP V DW D Sbjct: 69 VRGHLDGLQAAISEVASDRGEPAGVLKVSVALAFGMEYLLPLLPDFLQRYPHVRIDWQFD 128 Query: 61 NRPQDLIAGGFDAAIGGGFDLPLGMVARELARLQIVAVASPSFMRGKRRPRDPAGLGAFP 120 NR DLIA GFDAAIGGGF+L GMVAR LA I+AVASP++M+G+R P P L Sbjct: 129 NRQVDLIAEGFDAAIGGGFELAQGMVARTLAPAHIIAVASPTYMKGRRNPFSPEELAELD 188 Query: 121 CVAMRSPSTSRVRTLIMRNGAGAEMAAVQNPVIVLDDPSAMCHAVLLGMGIGLMAVPHAL 180 + MR T R+R +RN +GA AA V +DP+AM A +LG+G+ + AVP AL Sbjct: 189 GIVMRPARTGRIRQWTLRNASGAVQAAELRQSFVFNDPAAMTRAAVLGLGVTMTAVPDAL 248 Query: 181 PHLESGTLVQLLPGWYCDVGPLSLYFASQKLLPVPLSLY 219 P+L+ G LV+L+P WY D GP+SLY+AS+ LLP ++ Sbjct: 249 PYLDRGELVRLVPQWYADAGPISLYYASRTLLPAKTRVF 287 >C3MFE1.1 C3MFE1_RHISN Putative transcriptional regulator, LysR family Length = 309 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 109/220 (49%), Positives = 155/220 (70%) Query: 1 VQDGLDSIQGAIADITVNAGQPAGVLKLNTSQAFGVEYVLPLMPAFLERYPAVTPDWSLD 60 V+D L+S+QGAIA+ + +PAGVL+L+ S FG+EY+LP +P F+ RYP + P+W + Sbjct: 69 VRDHLESLQGAIAEASNEQAEPAGVLRLSMSPTFGIEYILPKLPEFMSRYPLIRPEWMFE 128 Query: 61 NRPQDLIAGGFDAAIGGGFDLPLGMVARELARLQIVAVASPSFMRGKRRPRDPAGLGAFP 120 NR DLIA G+DAAIGGGF+L G++A+ LA I+AVASPS+M+ + P DP+GL Sbjct: 129 NRQVDLIAEGYDAAIGGGFELTPGIIAKTLASAHIIAVASPSYMQDRVPPHDPSGLTELD 188 Query: 121 CVAMRSPSTSRVRTLIMRNGAGAEMAAVQNPVIVLDDPSAMCHAVLLGMGIGLMAVPHAL 180 + MRS T R+R MRN AG E +A IV++DP+AM A +LG+G+ ++A P AL Sbjct: 189 GIVMRSMRTGRIRQWQMRNVAGEEQSAALKERIVVNDPAAMRSAAVLGLGVAMIAKPDAL 248 Query: 181 PHLESGTLVQLLPGWYCDVGPLSLYFASQKLLPVPLSLYF 220 P+LE+G LV+L PGWY D GP+S+Y+A++ LLP ++ Sbjct: 249 PYLENGELVRLTPGWYADAGPISIYYANRTLLPTKTRVFI 288 >Q46VI9.1 Q46VI9_CUPPJ Regulatory protein, LysR:LysR, substrate-binding Length = 307 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 109/213 (51%), Positives = 145/213 (68%) Query: 1 VQDGLDSIQGAIADITVNAGQPAGVLKLNTSQAFGVEYVLPLMPAFLERYPAVTPDWSLD 60 V + +++ A A +AG+PAGVLK+ + AFG EY++PL+ FL YP + PDW + Sbjct: 69 VSNPFSALRDAFAGAAEDAGKPAGVLKVGMALAFGREYLVPLLGEFLALYPGIVPDWHFE 128 Query: 61 NRPQDLIAGGFDAAIGGGFDLPLGMVARELARLQIVAVASPSFMRGKRRPRDPAGLGAFP 120 NRP DLI GFDAAIGGG +L G+VARELAR +VAVASP+FM+GK PR P+ L AF Sbjct: 129 NRPTDLIRDGFDAAIGGGIELTEGVVARELARTHVVAVASPAFMQGKALPRHPSDLLAFD 188 Query: 121 CVAMRSPSTSRVRTLIMRNGAGAEMAAVQNPVIVLDDPSAMCHAVLLGMGIGLMAVPHAL 180 + RS +T R+R +RN G + A ++ DDP AM HA + G+GI L+ +PHA Sbjct: 189 GIVRRSGATGRLRAWTLRNQVGEQAPAEHRARLIFDDPEAMAHAAMHGLGIALLPMPHAA 248 Query: 181 PHLESGTLVQLLPGWYCDVGPLSLYFASQKLLP 213 P LESG L++LLPGWY D GP++LY+ S+ LLP Sbjct: 249 PRLESGALMRLLPGWYADNGPIALYYPSRTLLP 281