BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0433.p (361 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A0KKE3.1 A0KKE3_AERHH Two-component system sensor protein 216 4e-54 Q7NYT2.1 Q7NYT2_CHRVO Probable sensor/response regulator hybrid ... 202 6e-50 F1W489.1 F1W489_9BURK Two-component system sensor protein 201 2e-49 D3RSZ9.1 D3RSZ9_ALLVD Signal transduction histidine kinase with ... 189 8e-46 Q8P883.1 Q8P883_XANCP Two-component system sensor protein 187 2e-45 >A0KKE3.1 A0KKE3_AERHH Two-component system sensor protein Length = 1060 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 140/387 (36%), Positives = 199/387 (51%), Gaps = 73/387 (18%) Query: 4 LRHNLYYDIYLLDWKMPGMDGLAAARAIREASSPQGQPPIVIMVTAYARDEVVNAPDAEL 63 LR +D+ LLDW MPGMDGL AIR+A Q + PI+IM TAY+++E++ P +E Sbjct: 630 LRQGERFDVILLDWIMPGMDGLETCVAIRQAFEQQERSPIIIMATAYSQEELMRRPGSEQ 689 Query: 64 VDAVITKPVTPSTLYNTI---IH-VRQH-----RGEAKVR---------DGNEAXLFFA- 104 VD V+ KPVT S+LYN + IH R+H G+ ++R D ++ L A Sbjct: 690 VDLVLHKPVTGSSLYNAVARLIHEKREHVDLLESGQRRLRLPGVHILLVDDSDINLEVAT 749 Query: 105 --------------DGQEAVDWLRERPQGVDLVLMDIQMPVMDGYTATHEIRDTLGLREL 150 DG+ A+ L + Q +DLVLMD+QMPVMDGY AT +R G +E Sbjct: 750 RLLQREGAEVITAIDGERALTCLADPAQRIDLVLMDVQMPVMDGYEATRRLRQLPGHKET 809 Query: 151 PVIALTAGAFKAQQEAAMAAGMNGFLSKPYNVEQIISMVRQHIAHLSADELERRRKAPAE 210 PV+ALTAG FK Q+EAA+A GMN F++KP +VEQ+I+ Sbjct: 810 PVLALTAGVFKDQREAALACGMNDFIAKPLDVEQLIA----------------------- 846 Query: 211 YASTTVTTVFPSAAVGMASTGSVGSPGSAGSASLPAQDMSGIDVAVGLEAWGSADIYRKF 270 T+ P + V P + A + ++GID+ GL WG A +Y K+ Sbjct: 847 ----TLLRYLPDSVV----------PLTISDAPPAVEPVAGIDIDTGLRNWGEASVYLKY 892 Query: 271 LGKFAEQYGKTGSEILAHIHAGELAQAKTLAHKLRGSAGTLAVIDVQRLAGELEGLLSGA 330 L +F + Y G+ + +I E A +L HKL+G AG+L++ DV R++ EL + Sbjct: 893 LRRFRDDYMTVGTVLPDYIAQHETDAAASLTHKLKGVAGSLSLTDVARISAELNEAIEQG 952 Query: 331 ASASDCTVKAAELDAALTNARRAIANY 357 S E AL A++AI Y Sbjct: 953 GDTSQLMAPFLE---ALERAQQAIDLY 976 >Q7NYT2.1 Q7NYT2_CHRVO Probable sensor/response regulator hybrid EC=2.7.3.- Length = 1105 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 146/387 (37%), Positives = 202/387 (52%), Gaps = 73/387 (18%) Query: 1 MTRLRHNLYYDIYLLDWKMPGMDGLAAARAIREASSPQGQPPIVIMVTAYARDEVVNAPD 60 M L + D+ +LDWKMP MDGLAAA+AIR+A + + PI++M TAY+R+ + P Sbjct: 675 MAMLDGDQAVDVVVLDWKMPDMDGLAAAQAIRQACRGK-RMPIILMATAYSREVLQAEPA 733 Query: 61 AELVDAVITKPVTPSTLYNTIIHVR--QHRGEAKVRDGNE------------------AX 100 AELV V+ KPVTPS LYN + Q +++ GN A Sbjct: 734 AELVTEVLNKPVTPSGLYNAVARALRPQTAPPPQIQHGNRLQGLRLLVVDDSDINREVAQ 793 Query: 101 LFFA----------DGQEAVDWLRERPQGVDLVLMDIQMPVMDGYTATHEIRDTLGLREL 150 F DG+EA+DWL VD+VLMD+QMPVMDGY AT IR T L L Sbjct: 794 RIFEDEGASVALANDGKEALDWLGLHGGEVDIVLMDVQMPVMDGYEATRAIRATPALAHL 853 Query: 151 PVIALTAGAFKAQQEAAMAAGMNGFLSKPYNVEQIISMVRQHIAHLSADELERRRKAPAE 210 PV+ALTAGAF AQQ+AA AGM+ +++KP++VE I +R+ SA AP Sbjct: 854 PVVALTAGAFLAQQDAAREAGMSDYIAKPFDVEIAIGQLRRLAGRQSA--------AP-- 903 Query: 211 YASTTVTTVFPSAAVGMASTGSVGSPGSAGSASLPAQDMSGIDVAVGLEAWGSADIYRKF 270 A +G + A+ PA D+ G+ ++ GL+ W ++YR++ Sbjct: 904 -----------------AGSGPI-------QAAAPA-DLPGLAISRGLQIWRDPEVYRQY 938 Query: 271 LGKFAEQYGKTGSEILAHIHAGELAQAKTLAHKLRGSAGTLAVIDVQRLAGELEGLLSGA 330 L KFA YG S + AG++ A+ LAHKLRG+AG LA+ +V A ++E L Sbjct: 939 LRKFARDYGDCASTMRL---AGKVV-AQALAHKLRGAAGNLALDEVSSRAADVESRLQ-- 992 Query: 331 ASASDCTVKAAELDAALTNARRAIANY 357 + +D L AL A +I+ Y Sbjct: 993 -AGNDAGPALDALRIALARALDSISRY 1018 >F1W489.1 F1W489_9BURK Two-component system sensor protein Length = 625 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 145/393 (36%), Positives = 194/393 (49%), Gaps = 82/393 (20%) Query: 5 RHNLYYDIYLLDWKMPG-MDGLAAARAIREASSPQGQPPIVIMVTAYARDEVVNAPDAEL 63 R +L ++ +LDWKMPG MDGLA ARAIR A P+ + PIVIM TAY+ + + +L Sbjct: 277 REDLLPEVIVLDWKMPGAMDGLATARAIRAALPPE-RCPIVIMATAYSLRGLASIAGTDL 335 Query: 64 VDAVITKPVTPSTLYNTIIHVRQHRGE----------------AKVR------------- 94 VDA+++KPVT STLYN + + RG A +R Sbjct: 336 VDAILSKPVTASTLYNAVTEAQHKRGNGSTLQDTARLSTLHELAGIRVLIVDDSEINRDV 395 Query: 95 ------DGNEAXLFFADGQEAVDWLRERPQGVDLVLMDIQMPVMDGYTATHEIRDTLGLR 148 D DG+ A+DWL P VDLVLMD+QMPVMDG AT +R Sbjct: 396 ALRILSDQGALVTLAVDGKAALDWLMAHPDDVDLVLMDVQMPVMDGIEATRRLRRLPQFD 455 Query: 149 ELPVIALTAGAFKAQQEAAMAAGMNGFLSKPYNVEQIISMVRQHIAHLSADELERRRKAP 208 +LPV+ALTAGAFK+QQ+AA AAGMN F+SKP++V ++++R R +AP Sbjct: 456 DLPVVALTAGAFKSQQDAAQAAGMNHFISKPFDVPSTVALIR------------RLHRAP 503 Query: 209 AEYASTTVTTVFPSAAVGMASTGSVGSPGSAGSASLPAQDMSGIDVAVGLEAWGSADIYR 268 A+ V P+A ++ +DVA GL+ W + YR Sbjct: 504 AQQPP-----VVPAA-------------------------LAVMDVARGLQLWSTVPAYR 533 Query: 269 KFLGKFAEQYGKTGSEILAHIHAGELAQAKTLAHKLRGSAGTLAVIDVQRLAGELEGLLS 328 +L +FA Y I + + A A LAHKL G A LA+ D+ RLAG+ E +L Sbjct: 534 DYLQRFARSYAGAIDSINTSLVIDDHAAAAALAHKLAGDAANLALPDIHRLAGKAERVL- 592 Query: 329 GAASASDCTVKAAELDAALTNARRAIANYTNAA 361 D T +LD AL A AI + A Sbjct: 593 --LERRDPTTVLVKLDTALQQAFAAIDRFAQGA 623 >D3RSZ9.1 D3RSZ9_ALLVD Signal transduction histidine kinase with CheB and CheR activity Length = 1994 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 139/391 (35%), Positives = 194/391 (49%), Gaps = 62/391 (15%) Query: 10 YDIYLLDWKMPGMDGLAAARAIREASSPQG---QPPIVIMVTAYARDEVVNAPDAELVDA 66 YD L+DW+MPG DGL+ ARA+R A + +G P +++M +A +R + P+ ++DA Sbjct: 1530 YDAVLIDWRMPGEDGLSCARALRAAVAKKGLAGSPALMLMTSAQSRPALEAQPEIAMIDA 1589 Query: 67 VITKPVTPSTLYNTIIHVR-----------------QHRGEAKVR----DGNEAXLFFA- 104 ++ KPVTPS+LYN + +R + R A +R D +E A Sbjct: 1590 ILDKPVTPSSLYNALASLRGARRRYANTNRLLSVGRRSRQLAGLRVLMVDDSEINQEVAS 1649 Query: 105 --------------DGQEAVDWLRERPQGVDLVLMDIQMPVMDGYTATHEIRDTLGLREL 150 DG+ A+ WL P VD+VLMD+QMP +DGY AT +R R L Sbjct: 1650 GILVGHGAQVSVADDGEAALAWLDAHPDAVDIVLMDVQMPRLDGYAATRRLRLDRRWRNL 1709 Query: 151 PVIALTAGAFKAQQEAAMAAGMNGFLSKPYNVEQIISMVRQHIAHLSADELERRRKAPAE 210 PVIALTAGAF++ QEAA AAGMN F++KP+NV Q+I+ +++ AD+ Sbjct: 1710 PVIALTAGAFQSMQEAARAAGMNDFVAKPFNVAQLIACIQRWSGTAPADD---------- 1759 Query: 211 YASTTVTTVFPSAAVGM-ASTGSVGSPGSAGSASLPAQDMSGIDVAVGLEAWGSADIYRK 269 VT P+A + SV +P A+ GID+ LE WG IYR Sbjct: 1760 ----GVTDPEPAATTAADPPSESVRAPDVEALAA------HGIDLPTALERWGDPQIYRT 1809 Query: 270 FLGKFAEQYGKTGSEILAHIHAGELAQAKTLAHKLRGSAGTLAVIDVQRLAGELEGLLSG 329 +L KF + + I A I LA+ LAHKL G A TLA+ V LA LE L Sbjct: 1810 YLLKFRDGHADDARTIAAAIQTEALAEGGALAHKLTGVAATLALPRVAALARTLEQTLHE 1869 Query: 330 AASASDCTVKAAELDAALTNARRAIANYTNA 360 + V EL AL + + ++ A Sbjct: 1870 GRTPEASLV--TELQTALADVLSGLHDWAEA 1898 >Q8P883.1 Q8P883_XANCP Two-component system sensor protein Length = 1364 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 175/347 (50%), Gaps = 62/347 (17%) Query: 10 YDIYLLDWKMPGMDGLAAARAIREASSPQGQPPIVIMVTAYARDEVVNAPDAELVDAVIT 69 YDI+LLDW+MP +DG+A AR +R ++P G+ P+++MVTAY R + P+ + +DAV+T Sbjct: 937 YDIFLLDWRMPDIDGVAIARQVRARATP-GRHPVIVMVTAYERRLLEQHPEQQDLDAVMT 995 Query: 70 KPVTPSTLYNTIIHVRQHRGEAK-------------------------------VRDGNE 98 KPVT + L+ + + R A+ + +G Sbjct: 996 KPVTSAALHRLVEQLVDERPNARPATPTFVARRLEGAQLLLVDDSEINCEVAQRILEGEG 1055 Query: 99 AXLFFA-DGQEAVDWLRERPQGVDLVLMDIQMPVMDGYTATHEIRDTLGLRELPVIALTA 157 A + A DG++AV+ L+ P LVLMD+QMPV+DGY AT +R L LPVIALTA Sbjct: 1056 AMVTVAHDGEQAVNTLKRAPDLFHLVLMDVQMPVVDGYEATRRLRQIPSLASLPVIALTA 1115 Query: 158 GAFKAQQEAAMAAGMNGFLSKPYNVEQIISMVRQHIAHLSADELERRRKAPAEYASTTVT 217 GAF+ QQE A+ AGMNGF++KP+NVE++++ +R H R P E A Sbjct: 1116 GAFRPQQEKALEAGMNGFIAKPFNVEELVTAIR----HFLQPGSRRVSSLPHERA----- 1166 Query: 218 TVFPSAAVGMASTGSVGSPGSAGSASLPAQDMSGIDVAVGLEAWGSADIYRKFLGKFAEQ 277 P+A A T D +D A W + Y ++L K Sbjct: 1167 ---PAAGPEWAHT-----------------DPLLLDAARAQSLWREREPYERYLLKLLRD 1206 Query: 278 YGKTGSEILAHIHAGELAQAKTLAHKLRGSAGTLAVIDVQRLAGELE 324 AH+ EL LAHKLRG+AG+LA+ + +G+LE Sbjct: 1207 NPDPAETAAAHLRNNELPAIGALAHKLRGAAGSLALPALAGASGDLE 1253