BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0403.p         (219 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A1WM91.1 A1WM91_VEREI Polar amino acid ABC transporter, inner me...   363   7e-99
Q12EQ0.1 Q12EQ0_POLSJ Amino acid ABC transporter membrane protei...   353   1e-95
C5T2R9.1 C5T2R9_ACIDE Polar amino acid ABC transporter, inner me...   352   3e-95
E6V095.1 E6V095_VARPD Polar amino acid ABC transporter, inner me...   340   8e-92
C5CX21.1 C5CX21_VARPS Polar amino acid ABC transporter, inner me...   340   1e-91

>A1WM91.1 A1WM91_VEREI Polar amino acid ABC transporter, inner membrane
           subunit
          Length = 221

 Score =  363 bits (933), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 202/219 (92%), Positives = 211/219 (96%)

Query: 1   LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60
           LDF+PV EG P+LLHGAIVTV+ITA SLVLGC  GLLVG+GRLDRSKRL YGICTAYVTF
Sbjct: 3   LDFLPVLEGLPELLHGAIVTVKITATSLVLGCIFGLLVGMGRLDRSKRLRYGICTAYVTF 62

Query: 61  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120
           IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA
Sbjct: 63  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 122

Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180
           ARSLGMSSGKAMRTIILPQA+VRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV
Sbjct: 123 ARSLGMSSGKAMRTIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 182

Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219
           SYRSLEVY+AVALVYLVLT+LT MALQ+VE+ LRAGGAV
Sbjct: 183 SYRSLEVYLAVALVYLVLTTLTGMALQKVEQRLRAGGAV 221


>Q12EQ0.1 Q12EQ0_POLSJ Amino acid ABC transporter membrane protein, PAAT
           family
          Length = 222

 Score =  353 bits (905), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 170/219 (77%), Positives = 198/219 (90%)

Query: 1   LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60
           LDF P++ GWP LL GA+VTVEITA SL+LGC +GLLVG+GRL+  +R++YG+CTAYV  
Sbjct: 3   LDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAI 62

Query: 61  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120
           IRGTPLLVQLF+LFFGLPQF ILLPAF+CGV+GLGIYSGAYVSE+VRGAIQSID+GQMEA
Sbjct: 63  IRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEA 122

Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180
           ARS+GMSSG AMR ++LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV
Sbjct: 123 ARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219
           SYRSLEVY+A+A+VY VLT  T++ L+R+E  LRAGG V
Sbjct: 183 SYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMV 221


>C5T2R9.1 C5T2R9_ACIDE Polar amino acid ABC transporter, inner membrane
           subunit
          Length = 222

 Score =  352 bits (902), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/219 (78%), Positives = 198/219 (90%)

Query: 1   LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60
           LDF PV+ G P LL GA+VTVEITA SL+LGC +GLLVG+GRL+  +R++Y +CTAYV  
Sbjct: 3   LDFSPVWAGLPQLLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA 62

Query: 61  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120
           IRGTPLLVQLF+LFFGLPQF ILLPAF+CGV+GLGIYSGAYVSE+VRGAIQSIDKGQMEA
Sbjct: 63  IRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQMEA 122

Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180
           ARS+GMSSG AMRT++LPQA+VRMIPPLGNEFIALIKNSALVSLLTI DLMHEGQKIISV
Sbjct: 123 ARSIGMSSGLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISV 182

Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219
           SYRSLEVY+A+A+VY +LT +TS+ L+R+E  LRAGG V
Sbjct: 183 SYRSLEVYLAIAVVYFILTGVTSLVLRRMELRLRAGGMV 221


>E6V095.1 E6V095_VARPD Polar amino acid ABC transporter, inner membrane
           subunit
          Length = 222

 Score =  340 bits (872), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 189/217 (87%)

Query: 1   LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60
           LDF PV++GWPDLL GA+VTVEITA +L LGC LGL+VG+GRL+  +R IY +CTAYV  
Sbjct: 3   LDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYVAV 62

Query: 61  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120
           IRGTPLLVQLF+LFFGLP F ILLPAFLCGVLGLG+YSGAYVSEIVRGAIQSIDKGQ  A
Sbjct: 63  IRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122

Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180
           A+SLGM+ G AMR I+LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV
Sbjct: 123 AQSLGMTPGVAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGG 217
           SYRSLEVY+A+ALVY VLT   ++ L+  E+ LR GG
Sbjct: 183 SYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQGG 219


>C5CX21.1 C5CX21_VARPS Polar amino acid ABC transporter, inner membrane
           subunit
          Length = 222

 Score =  340 bits (871), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/217 (76%), Positives = 188/217 (86%)

Query: 1   LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60
            DF PV++GWPDLL GA+VTVEITA +L LGC LGLLVG+GRL+  +R +YG CTAYV  
Sbjct: 3   FDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYVAA 62

Query: 61  IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120
           IRGTPLLVQLF+LFFGLP F ILLPAFLCGVLGLG+YSGAYVSEIVRGAIQSIDKGQ  A
Sbjct: 63  IRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122

Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180
           A+SLGM+ G AMR I+LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV
Sbjct: 123 AQSLGMTPGTAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGG 217
           SYRSLEVY+A+ALVY VLT   ++ L+  E+ LR GG
Sbjct: 183 SYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQGG 219