BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0336.p         (126 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITY4.1 D8ITY4_HERSS Preprotein translocase SecE subunit transm...   207   4e-52
F1VZX1.1 F1VZX1_9BURK Preprotein translocase subunit SecE             205   2e-51
A6T3L9.1 A6T3L9_JANMA Preprotein translocase SecE subunit             186   1e-45
A4G9V1.1 A4G9V1_HERAR Preprotein translocase subunit SecE             180   8e-44
C3X6F9.1 C3X6F9_OXAFO Preprotein translocase subunit SecE             162   2e-38

>D8ITY4.1 D8ITY4_HERSS Preprotein translocase SecE subunit transmembrane
           protein
          Length = 126

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/126 (91%), Positives = 123/126 (97%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MS+QPVQTVNTS+DK+K+ALAIVAV+AGVVGFFVLS QSTPVRA+ALVAGLLVAV FAWT
Sbjct: 1   MSSQPVQTVNTSNDKIKIALAIVAVVAGVVGFFVLSDQSTPVRAVALVAGLLVAVAFAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+QGRGFVGFAKESVRETKKVVWPTRKEA QITA+VFAFVLIMAIFLWGTDKLLEFLLYD
Sbjct: 61  SAQGRGFVGFAKESVRETKKVVWPTRKEAMQITAVVFAFVLIMAIFLWGTDKLLEFLLYD 120

Query: 121 VILGWK 126
           VILGWK
Sbjct: 121 VILGWK 126


>F1VZX1.1 F1VZX1_9BURK Preprotein translocase subunit SecE
          Length = 127

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 115/126 (91%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSNQPVQTV+TSSDKLKVALA+ AVIAGVV F+VL+ +S+ VRA ALV GL+VAVGFAWT
Sbjct: 1   MSNQPVQTVSTSSDKLKVALAVCAVIAGVVAFYVLADKSSIVRASALVFGLIVAVGFAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+QG+ F+ FA E+VRETKKVVWPTRKEA QITAIVF FVL+MA+FLWGTDKLLEF+LYD
Sbjct: 61  STQGKEFLNFASEAVRETKKVVWPTRKEAMQITAIVFCFVLVMALFLWGTDKLLEFILYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>A6T3L9.1 A6T3L9_JANMA Preprotein translocase SecE subunit
          Length = 127

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 108/126 (85%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           M+NQPV+TV  S DK+K+ LAI+A IAGVVGF+ LS ++T VRA ALV GL+VA+  AWT
Sbjct: 1   MANQPVETVGASGDKIKIVLAILAAIAGVVGFYFLSDKATAVRAAALVGGLVVAIAIAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+ GR F+ F+KE+VRETKKVVWPTRKEA Q+TAIVF FVL+MA+FLWGTDKLLE +LYD
Sbjct: 61  SAAGRDFLNFSKEAVRETKKVVWPTRKEALQMTAIVFGFVLVMALFLWGTDKLLEVVLYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>A4G9V1.1 A4G9V1_HERAR Preprotein translocase subunit SecE
          Length = 127

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/126 (69%), Positives = 104/126 (82%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSN PVQTV  S DK+K+ LA++  IAGVVGF+ LS ++T VR  ALV GLL+A+  AWT
Sbjct: 1   MSNHPVQTVGASGDKVKIVLAVLVAIAGVVGFYFLSDKATIVRIAALVGGLLIAIAIAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+ GR FV FAKE+VRETKKVVWPTRKE  Q+TAIVF FVL+MA+FL+GTDKLLE +LYD
Sbjct: 61  SASGRDFVNFAKEAVRETKKVVWPTRKETLQMTAIVFGFVLVMALFLFGTDKLLEVVLYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>C3X6F9.1 C3X6F9_OXAFO Preprotein translocase subunit SecE
          Length = 127

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 97/126 (76%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSNQPVQ      DK+KVA A+ +++AG+ GF+ L+GQS+  R   LVAGL+V   FAW 
Sbjct: 1   MSNQPVQAGGGLGDKVKVACAVASILAGIFGFYFLAGQSSLTRIGVLVAGLVVGACFAWF 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           SS GR FV FA+ESVRETKKVVWP R +A ++T IVF FVL+MA FLWG DK+LEF+LY+
Sbjct: 61  SSSGRDFVVFARESVRETKKVVWPARNDAIRLTGIVFGFVLLMAAFLWGADKVLEFVLYN 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 IILGWK 126