BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0325.p         (127 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T3K9.1 RS12_JANMA 30S ribosomal protein S12                         249   1e-64
A4G9U3.1 RS12_HERAR 30S ribosomal protein S12                         249   1e-64
F1VVQ8.1 F1VVQ8_9BURK SSU ribosomal protein S12p (S23e)               248   3e-64
C3X6G7.1 C3X6G7_OXAFO 30S ribosomal protein S12                       243   6e-63
C3XCN8.1 C3XCN8_OXAFO 30S ribosomal protein S12                       241   4e-62

>A6T3K9.1 RS12_JANMA 30S ribosomal protein S12
          Length = 127

 Score =  249 bits (635), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 123/127 (96%), Positives = 123/127 (96%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSARVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYG K
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGTK 120

Query: 121 RAKAAKK 127
           RAKA KK
Sbjct: 121 RAKAGKK 127


>A4G9U3.1 RS12_HERAR 30S ribosomal protein S12
          Length = 127

 Score =  249 bits (635), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 123/127 (96%), Positives = 123/127 (96%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSARVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYG K
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGTK 120

Query: 121 RAKAAKK 127
           RAKA KK
Sbjct: 121 RAKAGKK 127


>F1VVQ8.1 F1VVQ8_9BURK SSU ribosomal protein S12p (S23e)
          Length = 127

 Score =  248 bits (632), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/127 (96%), Positives = 123/127 (96%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSARVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQ+RSKYG K
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQSRSKYGTK 120

Query: 121 RAKAAKK 127
           RAKA KK
Sbjct: 121 RAKAGKK 127


>C3X6G7.1 C3X6G7_OXAFO 30S ribosomal protein S12
          Length = 127

 Score =  243 bits (621), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 121/127 (95%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRV+   KSKSPALEN PQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVTVKTKSKSPALENCPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRG+LDTQGVKDRKQARSKYGAK
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAK 120

Query: 121 RAKAAKK 127
           RAKAA K
Sbjct: 121 RAKAASK 127


>C3XCN8.1 C3XCN8_OXAFO 30S ribosomal protein S12
          Length = 127

 Score =  241 bits (614), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 118/127 (92%), Positives = 120/127 (94%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVS   KSKSPAL+N PQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSVKAKSKSPALDNCPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRG+LDTQGVKDRKQARSKYGAK
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAK 120

Query: 121 RAKAAKK 127
           RAK A K
Sbjct: 121 RAKPASK 127