BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0318.p         (44 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8ITZ9.1 D8ITZ9_HERSS 50S ribosomal protein L3                         84   5e-15
A4G9T8.1 RL3_HERAR 50S ribosomal protein L3                            83   1e-14
A6T3K4.1 RL3_JANMA 50S ribosomal protein L3                            83   2e-14
F1VU78.1 F1VU78_9BURK LSU ribosomal protein L3p (L3e)                  80   7e-14
C3X6H1.1 C3X6H1_OXAFO 50S ribosomal protein L3                         74   6e-12

>D8ITZ9.1 D8ITZ9_HERSS 50S ribosomal protein L3
          Length = 222

 Score = 84.3 bits (207), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/44 (95%), Positives = 44/44 (100%)

Query: 1   VQNLEIARIDAERQLLLVKGAVPGAKNGQVVVSPAVKVKAKKGA 44
           VQNLEIAR+DAERQLLLVKGAVPGAKNGQV+VSPAVKVKAKKGA
Sbjct: 179 VQNLEIARVDAERQLLLVKGAVPGAKNGQVIVSPAVKVKAKKGA 222


>A4G9T8.1 RL3_HERAR 50S ribosomal protein L3
          Length = 224

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 44/44 (100%)

Query: 1   VQNLEIARIDAERQLLLVKGAVPGAKNGQVVVSPAVKVKAKKGA 44
           +QNLEIARIDA+RQLLLVKGAVPGAKNGQV+VSPAVKVKAKKGA
Sbjct: 181 MQNLEIARIDADRQLLLVKGAVPGAKNGQVIVSPAVKVKAKKGA 224


>A6T3K4.1 RL3_JANMA 50S ribosomal protein L3
          Length = 224

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/44 (93%), Positives = 43/44 (97%)

Query: 1   VQNLEIARIDAERQLLLVKGAVPGAKNGQVVVSPAVKVKAKKGA 44
            QNLEIARIDA+RQLLLVKGAVPGAKNGQV+VSPAVKVKAKKGA
Sbjct: 181 TQNLEIARIDADRQLLLVKGAVPGAKNGQVIVSPAVKVKAKKGA 224


>F1VU78.1 F1VU78_9BURK LSU ribosomal protein L3p (L3e)
          Length = 218

 Score = 80.5 bits (197), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/44 (88%), Positives = 43/44 (97%)

Query: 1   VQNLEIARIDAERQLLLVKGAVPGAKNGQVVVSPAVKVKAKKGA 44
            QNLEIARIDA+RQLLL+KGAVPGAKNG+VVVSPAVK+KAKKGA
Sbjct: 175 TQNLEIARIDADRQLLLIKGAVPGAKNGKVVVSPAVKIKAKKGA 218


>C3X6H1.1 C3X6H1_OXAFO 50S ribosomal protein L3
          Length = 222

 Score = 73.9 bits (180), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/44 (86%), Positives = 38/44 (86%)

Query: 1   VQNLEIARIDAERQLLLVKGAVPGAKNGQVVVSPAVKVKAKKGA 44
           VQNLEIARIDAER LLLVKGAVPGAKN QVVV PAVK K  KGA
Sbjct: 179 VQNLEIARIDAERNLLLVKGAVPGAKNAQVVVCPAVKTKVSKGA 222