BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0316.p         (104 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G9T6.1 RL23_HERAR 50S ribosomal protein L23                         186   8e-46
D8IU01.1 D8IU01_HERSS 50S ribosomal protein L23                       186   9e-46
A6T3K2.1 RL23_JANMA 50S ribosomal protein L23                         183   9e-45
F1VU80.1 F1VU80_9BURK LSU ribosomal protein L23p (L23Ae)              177   5e-43
C3XCP4.1 C3XCP4_OXAFO 50S ribosomal protein L23                       149   1e-34

>A4G9T6.1 RL23_HERAR 50S ribosomal protein L23
          Length = 105

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 94/101 (93%), Positives = 96/101 (95%)

Query: 4   IKHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQVESVQ 63
           IKHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV  DATKLE+KAAVELLFKVQVESVQ
Sbjct: 5   IKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKLEIKAAVELLFKVQVESVQ 64

Query: 64  VANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           VANRQGKQKRSGR  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 65  VANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>D8IU01.1 D8IU01_HERSS 50S ribosomal protein L23
          Length = 105

 Score =  186 bits (472), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 96/105 (91%), Positives = 100/105 (95%), Gaps = 1/105 (0%)

Query: 1   MNAI-KHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQV 59
           MNAI KHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV +DATKLEVKAAVELLFKV+V
Sbjct: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60

Query: 60  ESVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           ESVQVANRQGKQKRS   +GRRNHTRRAFVSLKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105


>A6T3K2.1 RL23_JANMA 50S ribosomal protein L23
          Length = 105

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 98/105 (93%), Gaps = 1/105 (0%)

Query: 1   MNAI-KHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQV 59
           M+AI KHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV  DATK E+KAAVELLFKVQV
Sbjct: 1   MSAILKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKPEIKAAVELLFKVQV 60

Query: 60  ESVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           ESVQVANRQGKQKRSGR  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>F1VU80.1 F1VU80_9BURK LSU ribosomal protein L23p (L23Ae)
          Length = 105

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 89/101 (88%), Positives = 95/101 (94%)

Query: 4   IKHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQVESVQ 63
           +K SEERL+KVLLAPVISEKATFVAEKNEQVVFL+  DATKLEVKAAVELLFKV+VESVQ
Sbjct: 5   LKFSEERLMKVLLAPVISEKATFVAEKNEQVVFLIMPDATKLEVKAAVELLFKVEVESVQ 64

Query: 64  VANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           VANRQGK+KRSG+  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 65  VANRQGKKKRSGKFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>C3XCP4.1 C3XCP4_OXAFO 50S ribosomal protein L23
          Length = 105

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/105 (73%), Positives = 92/105 (87%), Gaps = 1/105 (0%)

Query: 1   MNAI-KHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQV 59
           M+A+ K SEER++KVLLAPVISEKATFVAEK EQV+F V + ATK E+KAAVE LFKV+V
Sbjct: 1   MSAVMKISEERIMKVLLAPVISEKATFVAEKYEQVIFRVLKSATKPEIKAAVENLFKVEV 60

Query: 60  ESVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           ESVQV NR GKQKRSGR++GR+N+ + A+VSLKPGQEI+FTEE K
Sbjct: 61  ESVQVLNRMGKQKRSGRTMGRKNNQKLAYVSLKPGQEIHFTEEGK 105