BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0314.p         (111 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUS4.1 D8IUS4_HERSS 50S ribosomal protein L2                        220   5e-56
A6T3K1.1 RL2_JANMA 50S ribosomal protein L2                           219   1e-55
F1VY59.1 F1VY59_9BURK LSU ribosomal protein L2p (L8e)                 216   7e-55
A4G9T5.1 RL2_HERAR 50S ribosomal protein L2                           215   2e-54
B2JIG3.1 RL2_BURP8 50S ribosomal protein L2                           194   4e-48

>D8IUS4.1 D8IUS4_HERSS 50S ribosomal protein L2
          Length = 275

 Score =  220 bits (561), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 109/111 (98%), Positives = 110/111 (99%)

Query: 1   MAREGTYAQVRLRSGEVRRIHIECRATIGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 60
           MAREGTYAQVRLRSGEVRR+HIECRATIGEVGNGEHNLRKIGKAGA RWRGVRPTVRGVV
Sbjct: 165 MAREGTYAQVRLRSGEVRRVHIECRATIGEVGNGEHNLRKIGKAGATRWRGVRPTVRGVV 224

Query: 61  MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 111
           MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK
Sbjct: 225 MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 275


>A6T3K1.1 RL2_JANMA 50S ribosomal protein L2
          Length = 275

 Score =  219 bits (557), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/111 (96%), Positives = 110/111 (99%)

Query: 1   MAREGTYAQVRLRSGEVRRIHIECRATIGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 60
           MAREGTYAQVRLRSGEVRR+HIECRAT+GEVGN EH+LRKIGKAGAMRWRGVRPTVRGVV
Sbjct: 165 MAREGTYAQVRLRSGEVRRVHIECRATVGEVGNAEHSLRKIGKAGAMRWRGVRPTVRGVV 224

Query: 61  MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 111
           MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK
Sbjct: 225 MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 275


>F1VY59.1 F1VY59_9BURK LSU ribosomal protein L2p (L8e)
          Length = 166

 Score =  216 bits (551), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 105/111 (94%), Positives = 110/111 (99%)

Query: 1   MAREGTYAQVRLRSGEVRRIHIECRATIGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 60
           MAR+GTYAQVRLRSGEVRR+H+ECRAT+GEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV
Sbjct: 56  MARDGTYAQVRLRSGEVRRVHVECRATVGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 115

Query: 61  MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 111
           MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTR NKRTTSMI+SRRGKK
Sbjct: 116 MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRRNKRTTSMIISRRGKK 166


>A4G9T5.1 RL2_HERAR 50S ribosomal protein L2
          Length = 275

 Score =  215 bits (547), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/111 (94%), Positives = 108/111 (97%)

Query: 1   MAREGTYAQVRLRSGEVRRIHIECRATIGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 60
           MAREG YAQVRLRSGEVRR+HIECRAT+GEVGN EH+LRKIGKAGAMRWRGVRPTVRGVV
Sbjct: 165 MAREGVYAQVRLRSGEVRRVHIECRATVGEVGNAEHSLRKIGKAGAMRWRGVRPTVRGVV 224

Query: 61  MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 111
           MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTR NKRTTSMIVSRRGKK
Sbjct: 225 MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRRNKRTTSMIVSRRGKK 275


>B2JIG3.1 RL2_BURP8 50S ribosomal protein L2
          Length = 275

 Score =  194 bits (492), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 102/111 (91%)

Query: 1   MAREGTYAQVRLRSGEVRRIHIECRATIGEVGNGEHNLRKIGKAGAMRWRGVRPTVRGVV 60
           +AREGTYAQVRLRSGE+RR+HIECRATIGEVGN EH+LR+IGKAGA RWRG+RPTVRGV 
Sbjct: 165 LAREGTYAQVRLRSGEIRRVHIECRATIGEVGNEEHSLRQIGKAGANRWRGIRPTVRGVA 224

Query: 61  MNPVDHPHGGGEGKTAAGRHPVSPWGQQTKGKKTRSNKRTTSMIVSRRGKK 111
           MNPVDHPHGGGEGKTAAGR PVSPWG  TKG +TRSNKRTTSMIV RR K+
Sbjct: 225 MNPVDHPHGGGEGKTAAGRDPVSPWGTPTKGYRTRSNKRTTSMIVQRRHKR 275