BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0310.p         (139 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T3J7.1 RL16_JANMA 50S ribosomal protein L16                         278   1e-73
D8IUS8.1 D8IUS8_HERSS 50S ribosomal protein L16                       277   4e-73
A4G9T1.1 RL16_HERAR 50S ribosomal protein L16                         277   5e-73
C3XCP9.1 C3XCP9_OXAFO 50S ribosomal protein L16                       263   5e-69
C3X6H8.1 C3X6H8_OXAFO 50S ribosomal protein L16                       262   1e-68

>A6T3J7.1 RL16_JANMA 50S ribosomal protein L16
          Length = 139

 Score =  278 bits (712), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/139 (97%), Positives = 138/139 (99%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKA+GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRIFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL TTFVVRQVGQ
Sbjct: 121 LAAAKLPLLTTFVVRQVGQ 139


>D8IUS8.1 D8IUS8_HERSS 50S ribosomal protein L16
          Length = 139

 Score =  277 bits (708), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 135/139 (97%), Positives = 138/139 (99%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISH+RGTAVSFG+FGLKA GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGK+LYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPLSTTFVVRQVGQ
Sbjct: 121 LAAAKLPLSTTFVVRQVGQ 139


>A4G9T1.1 RL16_HERAR 50S ribosomal protein L16
          Length = 139

 Score =  277 bits (708), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 135/139 (97%), Positives = 137/139 (98%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKA+GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPIS KPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRIFPDKPISNKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL TTFVVRQVGQ
Sbjct: 121 LAAAKLPLLTTFVVRQVGQ 139


>C3XCP9.1 C3XCP9_OXAFO 50S ribosomal protein L16
          Length = 139

 Score =  263 bits (673), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 127/139 (91%), Positives = 134/139 (96%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQP+RRKYRKEQKGRNTGISH RGT VSFG+FGLKAVGRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPSRRKYRKEQKGRNTGISHERGTKVSFGDFGLKAVGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPIS+KPAEVRMG+GKGNPEYYVAEI+PGK+LYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRVFPDKPISEKPAEVRMGSGKGNPEYYVAEIRPGKVLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL T FV RQ+GQ
Sbjct: 121 LAAAKLPLQTVFVTRQIGQ 139


>C3X6H8.1 C3X6H8_OXAFO 50S ribosomal protein L16
          Length = 139

 Score =  262 bits (670), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 127/139 (91%), Positives = 135/139 (97%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQP+RRKYRKEQKGRNTGISH RGT VSFG+FGLKAVGRGRITARQIEAARRAMTRHI+
Sbjct: 1   MLQPSRRKYRKEQKGRNTGISHERGTKVSFGDFGLKAVGRGRITARQIEAARRAMTRHIR 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPIS+KPAEVRMG+GKGNPEYYVAEI+PGK+LYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRVFPDKPISEKPAEVRMGSGKGNPEYYVAEIRPGKVLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL T FVVRQ+GQ
Sbjct: 121 LAAAKLPLPTVFVVRQLGQ 139