BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0309.p         (63 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUS9.1 D8IUS9_HERSS 50S ribosomal subunit L29 protein               108   2e-22
C3XCQ0.1 C3XCQ0_OXAFO 50S ribosomal protein L29                       103   9e-21
A6T3J6.1 RL29_JANMA 50S ribosomal protein L29                         102   2e-20
A4G9T0.1 RL29_HERAR 50S ribosomal protein L29                         102   2e-20
C3X6H9.1 C3X6H9_OXAFO 50S ribosomal protein L29                        99   2e-19

>D8IUS9.1 D8IUS9_HERSS 50S ribosomal subunit L29 protein
          Length = 64

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/64 (89%), Positives = 59/64 (92%), Gaps = 1/64 (1%)

Query: 1  MKASELRGKDEAALAKELNELLKAHFSLRMQVATQQLNNTAQLKKVRRDIARVKTVINSK 60
          MKASELRGKD+A L KEL ELLKA FSLRMQ+ATQQLNNTAQLKKVRRDIARVKTVINSK
Sbjct: 1  MKASELRGKDKAGLEKELGELLKAQFSLRMQIATQQLNNTAQLKKVRRDIARVKTVINSK 60

Query: 61 -GQQ 63
           GQQ
Sbjct: 61 DGQQ 64


>C3XCQ0.1 C3XCQ0_OXAFO 50S ribosomal protein L29
          Length = 63

 Score =  103 bits (257), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 57/63 (90%)

Query: 1  MKASELRGKDEAALAKELNELLKAHFSLRMQVATQQLNNTAQLKKVRRDIARVKTVINSK 60
          MKASELR KD+A L  ELN+LLKA F LRMQ+ATQQLNNTAQLKKVRRDIARVKTV+NSK
Sbjct: 1  MKASELRSKDQAELKTELNDLLKAQFGLRMQIATQQLNNTAQLKKVRRDIARVKTVMNSK 60

Query: 61 GQQ 63
          G++
Sbjct: 61 GKE 63


>A6T3J6.1 RL29_JANMA 50S ribosomal protein L29
          Length = 63

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 56/60 (93%)

Query: 1  MKASELRGKDEAALAKELNELLKAHFSLRMQVATQQLNNTAQLKKVRRDIARVKTVINSK 60
          MKASEL+GKD+AAL KELN+LLKA F LRMQ+ATQQLNNT+QLKKVRRDIARVKTV+N K
Sbjct: 1  MKASELQGKDQAALTKELNDLLKAQFGLRMQIATQQLNNTSQLKKVRRDIARVKTVMNQK 60


>A4G9T0.1 RL29_HERAR 50S ribosomal protein L29
          Length = 63

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 56/60 (93%)

Query: 1  MKASELRGKDEAALAKELNELLKAHFSLRMQVATQQLNNTAQLKKVRRDIARVKTVINSK 60
          MKASEL+GKD+AAL KELN+LLKA F LRMQ+ATQQLNNT+QLKKVRRDIARVKTV+N K
Sbjct: 1  MKASELQGKDQAALTKELNDLLKAQFGLRMQIATQQLNNTSQLKKVRRDIARVKTVMNQK 60


>C3X6H9.1 C3X6H9_OXAFO 50S ribosomal protein L29
          Length = 63

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 55/62 (88%)

Query: 1  MKASELRGKDEAALAKELNELLKAHFSLRMQVATQQLNNTAQLKKVRRDIARVKTVINSK 60
          MKASELR KD+A L  ELN+LLKA F LRMQ+ATQQL NT+QLKKVRRDIARVKTV+NSK
Sbjct: 1  MKASELRSKDQAELKTELNDLLKAQFGLRMQLATQQLTNTSQLKKVRRDIARVKTVMNSK 60

Query: 61 GQ 62
          G+
Sbjct: 61 GK 62