BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0299.p         (59 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUT9.1 D8IUT9_HERSS 50S ribosomal protein L30                       114   4e-24
A6T3I6.1 RL30_JANMA 50S ribosomal protein L30                         105   2e-21
A4G9S0.1 RL30_HERAR 50S ribosomal protein L30                         105   2e-21
B3R7F0.1 RL30_CUPTR 50S ribosomal protein L30                         102   2e-20
Q46WG2.1 RL30_CUPPJ 50S ribosomal protein L30                         102   2e-20

>D8IUT9.1 D8IUT9_HERSS 50S ribosomal protein L30
          Length = 59

 Score =  114 bits (286), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 59/59 (100%)

Query: 1  MANTIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          MANTIKV+LVKGLIGTRQDHRATVRGLGLRRVNSVSEL+DTPSVRGMINKVSYLVKVVS
Sbjct: 1  MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 59


>A6T3I6.1 RL30_JANMA 50S ribosomal protein L30
          Length = 59

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/59 (86%), Positives = 57/59 (96%)

Query: 1  MANTIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          MANT+KV+LVKGLIGTR+ HRATVRGLGLR +NSVSEL+DTP+VRGMINKVSYLVKVVS
Sbjct: 1  MANTVKVKLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVVS 59


>A4G9S0.1 RL30_HERAR 50S ribosomal protein L30
          Length = 59

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 51/59 (86%), Positives = 57/59 (96%)

Query: 1  MANTIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          MANT+KV+LVKGLIGTR+ HRATVRGLGLR +NSVSEL+DTP+VRGMINKVSYLVKVVS
Sbjct: 1  MANTVKVKLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVVS 59


>B3R7F0.1 RL30_CUPTR 50S ribosomal protein L30
          Length = 60

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/56 (85%), Positives = 55/56 (98%)

Query: 4  TIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          T+KVQLV+ LIGTR+DHRATVRGLGLRR+NSVSELQDTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60


>Q46WG2.1 RL30_CUPPJ 50S ribosomal protein L30
          Length = 60

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/56 (85%), Positives = 55/56 (98%)

Query: 4  TIKVQLVKGLIGTRQDHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKVVS 59
          T+KVQLV+ LIGTR+DHRATVRGLGLRR+NSVSELQDTP+VRGMINKVSYLVKV++
Sbjct: 5  TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60