BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0297.p (443 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUU1.1 D8IUU1_HERSS Preprotein translocase subunit secY 878 0.0 A4G9R8.1 A4G9R8_HERAR Preprotein translocase subunit secY 839 0.0 A6T3I4.1 A6T3I4_JANMA Preprotein translocase subunit secY 835 0.0 F1VYD8.1 F1VYD8_9BURK Preprotein translocase secY subunit 817 0.0 C3XCR2.1 C3XCR2_OXAFO Preprotein translocase SecY subunit 768 0.0 >D8IUU1.1 D8IUU1_HERSS Preprotein translocase subunit secY Length = 443 Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/443 (98%), Positives = 440/443 (99%) Query: 1 LATTPQLAKGAAKGFPWNRLWFLLAALVVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 +ATTPQLAKGAAKGFPW RLWFLL AL+VYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM Sbjct: 1 MATTPQLAKGAAKGFPWGRLWFLLGALIVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 Query: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG Sbjct: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 Query: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLVTGTMFLMWLGEQITERGLGNG 180 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTL+TGTMFLMWLGEQITERGLGNG Sbjct: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLITGTMFLMWLGEQITERGLGNG 180 Query: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMSALSAILICVIVALVTFLVVFIERGQRKILV 240 ISIIIFAGIAAGLPNALGGLFELVRTGSM+ALSAILICVIVALVTFLVVFIERGQRKILV Sbjct: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMNALSAILICVIVALVTFLVVFIERGQRKILV 240 Query: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF 300 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF Sbjct: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF 300 Query: 301 LKDLAASMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 LKDLAASMAPGEPIHALLYA+AIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT Sbjct: 301 LKDLAASMAPGEPIHALLYAVAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 Query: 361 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN Sbjct: 361 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 Query: 421 YVMSQQYESLLRKANFKGGMTSR 443 YVMSQQYESLLRKANFKGGMT R Sbjct: 421 YVMSQQYESLLRKANFKGGMTPR 443 >A4G9R8.1 A4G9R8_HERAR Preprotein translocase subunit secY Length = 443 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/443 (91%), Positives = 433/443 (97%) Query: 1 LATTPQLAKGAAKGFPWNRLWFLLAALVVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 +ATTPQLAKGA+ GFPWNRLWFLL AL+V+RIGAHIPVPGI+P +LAQLFKQNQGGILGM Sbjct: 1 MATTPQLAKGASNGFPWNRLWFLLGALIVFRIGAHIPVPGINPDELAQLFKQNQGGILGM 60 Query: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 FNMFSGGALSRFT+FALGIMPYISASIIMQL+SVVSPQ+EALKKEGE+GRRKITQYTRYG Sbjct: 61 FNMFSGGALSRFTVFALGIMPYISASIIMQLMSVVSPQMEALKKEGESGRRKITQYTRYG 120 Query: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLVTGTMFLMWLGEQITERGLGNG 180 TL+LATFQ LGIAVALESQA LV+DPG+AFRLTTV+TLVTGTMFLMWLGEQITERGLGNG Sbjct: 121 TLLLATFQGLGIAVALESQANLVIDPGMAFRLTTVITLVTGTMFLMWLGEQITERGLGNG 180 Query: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMSALSAILICVIVALVTFLVVFIERGQRKILV 240 ISIIIFAGIAAGLP+A+ GLFELVRTGSM+ALSAILIC++VA VT+LVVFIERGQRKILV Sbjct: 181 ISIIIFAGIAAGLPSAVAGLFELVRTGSMNALSAILICLVVAAVTYLVVFIERGQRKILV 240 Query: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF 300 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSG+T++PF+RF Sbjct: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGETTSPFVRF 300 Query: 301 LKDLAASMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 LKDLAASMAPGEPIHALLYA AIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT Sbjct: 301 LKDLAASMAPGEPIHALLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 Query: 361 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 ARYIDKIL RLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN Sbjct: 361 ARYIDKILTRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 Query: 421 YVMSQQYESLLRKANFKGGMTSR 443 YVMSQQYESLLRKANFKGG+ +R Sbjct: 421 YVMSQQYESLLRKANFKGGIPTR 443 >A6T3I4.1 A6T3I4_JANMA Preprotein translocase subunit secY Length = 443 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/443 (92%), Positives = 429/443 (96%) Query: 1 LATTPQLAKGAAKGFPWNRLWFLLAALVVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 +ATTPQLAKGA GFPW RLWFLL ALVV+RIGAHIPVPGIDP QLAQLFKQNQGGILGM Sbjct: 1 MATTPQLAKGATSGFPWGRLWFLLGALVVFRIGAHIPVPGIDPEQLAQLFKQNQGGILGM 60 Query: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 FNMFSGGALSRFTIFALGIMPYISASIIMQL+SVVSPQLEALKKEGE+GRRKITQYTRYG Sbjct: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLMSVVSPQLEALKKEGESGRRKITQYTRYG 120 Query: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLVTGTMFLMWLGEQITERGLGNG 180 TL+LATFQ LGIAVALESQ GLV+DPG+AFRLTTV+TLVTGTMFLMWLGEQITERGLGNG Sbjct: 121 TLLLATFQGLGIAVALESQIGLVIDPGMAFRLTTVITLVTGTMFLMWLGEQITERGLGNG 180 Query: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMSALSAILICVIVALVTFLVVFIERGQRKILV 240 ISIIIFAGIAAGLP+A+ GLFELVRTGSM+ALSAILICV+VA VT+LVVFIERGQRKILV Sbjct: 181 ISIIIFAGIAAGLPSAVAGLFELVRTGSMNALSAILICVVVAAVTYLVVFIERGQRKILV 240 Query: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF 300 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSG+T++ F+ F Sbjct: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGETTSKFVGF 300 Query: 301 LKDLAASMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 LKDLAASMAPGEPIHALLYA AIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT Sbjct: 301 LKDLAASMAPGEPIHALLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 Query: 361 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 ARYIDKIL RLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN Sbjct: 361 ARYIDKILTRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 Query: 421 YVMSQQYESLLRKANFKGGMTSR 443 YVMSQQYESLLRKANFKGG+ +R Sbjct: 421 YVMSQQYESLLRKANFKGGIPTR 443 >F1VYD8.1 F1VYD8_9BURK Preprotein translocase secY subunit Length = 443 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/443 (92%), Positives = 429/443 (96%) Query: 1 LATTPQLAKGAAKGFPWNRLWFLLAALVVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 +AT+PQLAK A+ GFPW RLWFLL ALVVYR+GAHIPVPGIDP QLAQLFKQNQGGILGM Sbjct: 1 MATSPQLAKSASSGFPWGRLWFLLGALVVYRLGAHIPVPGIDPQQLAQLFKQNQGGILGM 60 Query: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 FNMFSGGALSRFT+FALGIMPYISASIIMQL+S+VSPQLEALKKEGE+GRRKITQYTRYG Sbjct: 61 FNMFSGGALSRFTVFALGIMPYISASIIMQLMSIVSPQLEALKKEGESGRRKITQYTRYG 120 Query: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLVTGTMFLMWLGEQITERGLGNG 180 TL LA FQALGIAVALESQAGLVLDPGLAFR T VVTLVTGTMFLMWLGEQITERGLGNG Sbjct: 121 TLFLALFQALGIAVALESQAGLVLDPGLAFRFTCVVTLVTGTMFLMWLGEQITERGLGNG 180 Query: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMSALSAILICVIVALVTFLVVFIERGQRKILV 240 ISIIIFAGIAAGLP ALGGLFELVRTGSMSA SAI IC++VA+VTF+VVFIERGQRKILV Sbjct: 181 ISIIIFAGIAAGLPTALGGLFELVRTGSMSAFSAIFICLVVAVVTFVVVFIERGQRKILV 240 Query: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSGDTSNPFIRF 300 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFT+GDTSNPF+RF Sbjct: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTAGDTSNPFVRF 300 Query: 301 LKDLAASMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 LKDL++SMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT Sbjct: 301 LKDLSSSMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQT 360 Query: 361 ARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 ARYIDKIL RLTLAGAVYITLVCLLPEFL+A++KVPFYFGGTSLLIIVVVTMDFMAQVQN Sbjct: 361 ARYIDKILTRLTLAGAVYITLVCLLPEFLVAKYKVPFYFGGTSLLIIVVVTMDFMAQVQN 420 Query: 421 YVMSQQYESLLRKANFKGGMTSR 443 YVMSQQYESLLRKANFKGG+ +R Sbjct: 421 YVMSQQYESLLRKANFKGGIPTR 443 >C3XCR2.1 C3XCR2_OXAFO Preprotein translocase SecY subunit Length = 441 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/438 (84%), Positives = 409/438 (93%), Gaps = 1/438 (0%) Query: 1 LATTPQLAKGAAKGFPWNRLWFLLAALVVYRIGAHIPVPGIDPTQLAQLFKQNQGGILGM 60 +AT+ AKGA GFPW RL+FLL ALVV+RIGAHIPVPGID QLA LF QNQGGILGM Sbjct: 1 MATSSNSAKGATAGFPWGRLFFLLGALVVFRIGAHIPVPGIDSEQLALLFNQNQGGILGM 60 Query: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQLLSVVSPQLEALKKEGEAGRRKITQYTRYG 120 FNMFSGGALSRFTIFALGIMPYISASIIMQ+L +VSP ++ALKKEGEAGRRK+TQYTRYG Sbjct: 61 FNMFSGGALSRFTIFALGIMPYISASIIMQMLGIVSPAIDALKKEGEAGRRKMTQYTRYG 120 Query: 121 TLVLATFQALGIAVALESQAGLVLDPGLAFRLTTVVTLVTGTMFLMWLGEQITERGLGNG 180 TLVLA FQ LGIAVALESQ GLV+DPG+AFR T VVTLVTGTMFLMWLGEQITERGLGNG Sbjct: 121 TLVLAAFQGLGIAVALESQPGLVIDPGMAFRFTAVVTLVTGTMFLMWLGEQITERGLGNG 180 Query: 181 ISIIIFAGIAAGLPNALGGLFELVRTGSMSALSAILICVIVALVTFLVVFIERGQRKILV 240 IS+IIFAGIAAGLPNA+GGL ELVRTGSMS L+AI+ICVIVALVT+LVV+IE GQR+ILV Sbjct: 181 ISMIIFAGIAAGLPNAIGGLIELVRTGSMSTLTAIIICVIVALVTYLVVYIESGQRRILV 240 Query: 241 NYAKRQVGNKIYGGQSSHLPLKLNMAGVIPPIFASSIILFPATITSWFTSG-DTSNPFIR 299 NYAKRQVGNKIYGGQSS LPLK+NMAGVIPPIFASSIILFPATI WF +G ++ N F+R Sbjct: 241 NYAKRQVGNKIYGGQSSFLPLKVNMAGVIPPIFASSIILFPATIAGWFATGSESDNMFVR 300 Query: 300 FLKDLAASMAPGEPIHALLYAIAIVFFCFFYTALVFNSKETADNLKKSGAFVPGIRPGDQ 359 FLKDL+AS+APGEP+HA+LYA AI+FFCFFYTALVFNS+ETADNLKKSGAF+PGIRPG+Q Sbjct: 301 FLKDLSASLAPGEPVHAILYAAAIIFFCFFYTALVFNSRETADNLKKSGAFIPGIRPGEQ 360 Query: 360 TARYIDKILMRLTLAGAVYITLVCLLPEFLIARWKVPFYFGGTSLLIIVVVTMDFMAQVQ 419 TARY+DKILMRLTLAGA+Y+TLVCLLPEFL+ARW+VPFYFGGTSLLIIVVVTMDFMAQ+Q Sbjct: 361 TARYVDKILMRLTLAGAIYVTLVCLLPEFLVARWQVPFYFGGTSLLIIVVVTMDFMAQIQ 420 Query: 420 NYVMSQQYESLLRKANFK 437 NYVMSQQY+SLLRK+NFK Sbjct: 421 NYVMSQQYDSLLRKSNFK 438