BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0291.p         (110 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUU8.1 D8IUU8_HERSS 50S ribosomal protein L17                       204   4e-51
A6T3H7.1 RL17_JANMA 50S ribosomal protein L17                         195   2e-48
A4G9R2.1 RL17_HERAR 50S ribosomal protein L17                         190   6e-47
C3XCR8.1 C3XCR8_OXAFO 50S ribosomal protein L17                       187   4e-46
C3X6J7.1 C3X6J7_OXAFO 50S ribosomal protein L17                       186   8e-46

>D8IUU8.1 D8IUU8_HERSS 50S ribosomal protein L17
          Length = 131

 Score =  204 bits (519), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/112 (91%), Positives = 108/112 (96%), Gaps = 2/112 (1%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAF+RLRDREIVGKL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE--EAPSVE 110
           FSELGPRYAARNGGYLRILKMGFR GDNAPMAFVELVDRP+V++  +AP+ E
Sbjct: 80  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAADAPTAE 131


>A6T3H7.1 RL17_JANMA 50S ribosomal protein L17
          Length = 131

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/104 (91%), Positives = 101/104 (97%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRV+EPILTLGKTD+LANKRLAF+RLRDRE+V KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVIEPILTLGKTDSLANKRLAFNRLRDREMVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE 104
           F+ELGPRYA RNGGYLRILKMGFRVGDNAPMAFVELVDRPD +E
Sbjct: 80  FAELGPRYANRNGGYLRILKMGFRVGDNAPMAFVELVDRPDTTE 123


>A4G9R2.1 RL17_HERAR 50S ribosomal protein L17
          Length = 131

 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 91/104 (87%), Positives = 100/104 (96%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRV+EPILTLGKTD+LANKRLAF+RLRDRE+V KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVIEPILTLGKTDSLANKRLAFNRLRDREMVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE 104
           F+ELGPRYA RNGGYLRILKMGFR GDNAPMAF+EL+DRP+ +E
Sbjct: 80  FAELGPRYANRNGGYLRILKMGFRAGDNAPMAFIELLDRPETTE 123


>C3XCR8.1 C3XCR8_OXAFO 50S ribosomal protein L17
          Length = 130

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/105 (86%), Positives = 100/105 (95%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPI+TLGK D++ANKRLAF+RLRDREIV KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPIITLGKIDSVANKRLAFNRLRDREIVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSEE 105
           F+ELGPR+A RNGGYLRILKMGFRVGDNAPMA+VEL+DRP+  EE
Sbjct: 80  FNELGPRFANRNGGYLRILKMGFRVGDNAPMAYVELLDRPEQPEE 124


>C3X6J7.1 C3X6J7_OXAFO 50S ribosomal protein L17
          Length = 129

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 90/101 (89%), Positives = 98/101 (97%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPI+TLGKTDT+ANKRLAF+RLRDREIV KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPIITLGKTDTVANKRLAFNRLRDREIVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPD 101
           F+ELGPR+A RNGGYLRILKMGFR GDNAPMA+VEL+DRP+
Sbjct: 80  FNELGPRFANRNGGYLRILKMGFRAGDNAPMAYVELMDRPE 120