BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0278.p (343 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q6D701.1 Q6D701_ERWCT Putative taurine-binding periplasmic protein 396 e-108 C6DD68.1 C6DD68_PECCP Substrate-binding region of ABC-type glyci... 394 e-108 D0KAC0.1 D0KAC0_PECWW Substrate-binding region of ABC-type glyci... 392 e-107 A8AI87.1 A8AI87_CITK8 Putative uncharacterized protein 384 e-104 D8JMV3.1 D8JMV3_ACISD Substrate-binding region of ABC-type glyci... 381 e-104 >Q6D701.1 Q6D701_ERWCT Putative taurine-binding periplasmic protein Length = 337 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/325 (58%), Positives = 245/325 (75%), Gaps = 5/325 (1%) Query: 16 LIVTTLGANLAHAENVPQEVRFAWAGGPRVWILGKIDKSFDKSFGAPVKWIPFATGADVL 75 L++TT ++ AE P E+R A++GG +V +L K D S K+ GAPVKW+ FA+GAD L Sbjct: 14 LLMTT---SVLAAEKHPDEIRVAYSGGSQVLVLAKADGSLQKALGAPVKWVQFASGADAL 70 Query: 76 SLFAAKEIDIARFGSSPAVAGIARKLPIEIISVPEVIATSERLIGRKSKNINSIKDIEGK 135 + FA+ IDIA FGSSPA AGI RKLP+EI+ V VIAT ERLI + I ++KDIEGK Sbjct: 71 NYFASNAIDIANFGSSPATAGIVRKLPVEIVGVSGVIATYERLIAKS--GITTLKDIEGK 128 Query: 136 TVAYPPNSTAQYALELAIKVNRLDKSKIRLVPLKPADQVAAWKRGDIDAAYVWGPFTQQF 195 VAYPPNSTAQYALE AI VN+LD+SKI L+PL+PA+ VAAWKRGDIDA YVW PF Q+ Sbjct: 129 RVAYPPNSTAQYALEAAIAVNKLDRSKITLIPLRPAEMVAAWKRGDIDAGYVWAPFAQEL 188 Query: 196 EADGGHEIFVTKQLQKDGYLVYNNFVVRKEFAEKYPQLVVKFLRTYQEKVDQYKKDPDGS 255 EA GH IF TK LQKDGYL+YNN+VVRK FA++YP+ V +FLR +Q+KVD++++DP+ + Sbjct: 189 EASAGHAIFATKDLQKDGYLIYNNYVVRKAFAQQYPETVARFLRVHQQKVDEFRQDPEKA 248 Query: 256 AQLIAKHLDIPFETARSVLTGLEYPSSTEQLTPAYLGNGAATPTSGIAKAAKDTANFLVE 315 A ++AK + P TA + L+GLEYP+ +Q+T +LG+G T SGI +A TA+FL Sbjct: 249 AAIVAKEVGAPVTTATNTLSGLEYPTLEQQVTAQWLGDGNNTDRSGIGQAVAKTAHFLES 308 Query: 316 IGDLRKSDVPESFAPAINISYLKQA 340 IG++R+ D+P SFA +IN SYLKQA Sbjct: 309 IGEVRQRDIPASFADSINSSYLKQA 333 >C6DD68.1 C6DD68_PECCP Substrate-binding region of ABC-type glycine betaine transport system Length = 337 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/325 (58%), Positives = 244/325 (75%), Gaps = 5/325 (1%) Query: 16 LIVTTLGANLAHAENVPQEVRFAWAGGPRVWILGKIDKSFDKSFGAPVKWIPFATGADVL 75 L++TT ++ AE P EVR A++GG +V +L K D S K+ GAPVKW+ FA+GAD L Sbjct: 14 LLITT---SVLAAEKHPDEVRVAYSGGSQVLVLAKADGSLQKALGAPVKWVQFASGADAL 70 Query: 76 SLFAAKEIDIARFGSSPAVAGIARKLPIEIISVPEVIATSERLIGRKSKNINSIKDIEGK 135 + FA+ IDIA FGSSPA AGI RKLP+EI+ V VIAT ERLI + I ++KDIEGK Sbjct: 71 NYFASNAIDIANFGSSPATAGIVRKLPVEIVGVSGVIATYERLIAKS--GIATLKDIEGK 128 Query: 136 TVAYPPNSTAQYALELAIKVNRLDKSKIRLVPLKPADQVAAWKRGDIDAAYVWGPFTQQF 195 VAYPPNSTAQYALE AI VN+LD+SKI L+PL+PA+ VAAWKRGDIDA YVW PF Q+ Sbjct: 129 RVAYPPNSTAQYALEAAIAVNKLDRSKITLIPLRPAEMVAAWKRGDIDAGYVWAPFAQEL 188 Query: 196 EADGGHEIFVTKQLQKDGYLVYNNFVVRKEFAEKYPQLVVKFLRTYQEKVDQYKKDPDGS 255 EA GH IF TK LQKDGYL+YNN+VVRK FA++YP+ V +FLR +Q KVD++++DP+ + Sbjct: 189 EASAGHAIFATKDLQKDGYLIYNNYVVRKAFAQQYPETVARFLRVHQLKVDEFRQDPEKA 248 Query: 256 AQLIAKHLDIPFETARSVLTGLEYPSSTEQLTPAYLGNGAATPTSGIAKAAKDTANFLVE 315 A ++AK + P TA + L+GLEYP+ +Q T +LG+G+ T SGI +A TA+FL Sbjct: 249 AAIVAKEVGAPVTTATNTLSGLEYPTLEQQATAQWLGDGSNTDRSGIGQAVAKTAHFLES 308 Query: 316 IGDLRKSDVPESFAPAINISYLKQA 340 IG++R+ D+P SFA +IN SYLKQA Sbjct: 309 IGEVRQRDIPASFADSINSSYLKQA 333 >D0KAC0.1 D0KAC0_PECWW Substrate-binding region of ABC-type glycine betaine transport system Length = 342 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/325 (57%), Positives = 239/325 (73%), Gaps = 2/325 (0%) Query: 16 LIVTTLGANLAHAENVPQEVRFAWAGGPRVWILGKIDKSFDKSFGAPVKWIPFATGADVL 75 + + L A E P EVR A++GG +V +L K D S K+ GAPVKW+ FA+GAD L Sbjct: 16 MATSVLAAESNAPEKHPDEVRVAYSGGSQVLVLAKADGSLQKTLGAPVKWVQFASGADAL 75 Query: 76 SLFAAKEIDIARFGSSPAVAGIARKLPIEIISVPEVIATSERLIGRKSKNINSIKDIEGK 135 + FA+ IDIA FGSSPA AGI RKLP+EI+ V VIAT ERLI + I ++KDIEGK Sbjct: 76 NYFASNAIDIANFGSSPATAGIVRKLPVEIVGVSGVIATYERLIAKS--GITTLKDIEGK 133 Query: 136 TVAYPPNSTAQYALELAIKVNRLDKSKIRLVPLKPADQVAAWKRGDIDAAYVWGPFTQQF 195 VAYPPNSTAQYALE AI VN+LD+SKI L+PL+PA+ VAAWKRGDIDA YVW PF Q+ Sbjct: 134 RVAYPPNSTAQYALEAAIAVNKLDRSKITLIPLRPAEMVAAWKRGDIDAGYVWAPFAQEL 193 Query: 196 EADGGHEIFVTKQLQKDGYLVYNNFVVRKEFAEKYPQLVVKFLRTYQEKVDQYKKDPDGS 255 EA GH IF TK LQKDGYL+YNN+VVRK FA++YP+ V +FLR +Q+KVD++++DP+ + Sbjct: 194 EASAGHAIFATKDLQKDGYLIYNNYVVRKAFAQQYPKTVARFLRVHQQKVDEFRQDPEKA 253 Query: 256 AQLIAKHLDIPFETARSVLTGLEYPSSTEQLTPAYLGNGAATPTSGIAKAAKDTANFLVE 315 ++AK + P TA + L+GLEYP+ +Q T +LG+G T SGI +A TA+FL Sbjct: 254 VAIVAKEVGAPVTTATNTLSGLEYPTLEQQATAQWLGDGNNTDRSGIGQAVAKTAHFLES 313 Query: 316 IGDLRKSDVPESFAPAINISYLKQA 340 IG++R+ D+P SFA +IN SYLKQA Sbjct: 314 IGEVRQRDIPASFADSINSSYLKQA 338 >A8AI87.1 A8AI87_CITK8 Putative uncharacterized protein Length = 335 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/331 (57%), Positives = 235/331 (70%), Gaps = 8/331 (2%) Query: 10 LAAAAALIVTTLGANLAHAENVPQEVRFAWAGGPRVWILGKIDKSFDKSFGAPVKWIPFA 69 L AA L V T P EVR A++GG +V +L K D S D + + VKW+ FA Sbjct: 8 LLAAGGLWVNT------SVAETPAEVRVAYSGGSQVLMLAKADGSLDNALHSKVKWVQFA 61 Query: 70 TGADVLSLFAAKEIDIARFGSSPAVAGIARKLPIEIISVPEVIATSERLIGRKSKNINSI 129 +GAD L+ FA+ IDIA FGSSPA AGI RKLP+EI+ V VIA+ ERLIG+ I I Sbjct: 62 SGADALNYFASNAIDIANFGSSPATAGIVRKLPVEIVGVSGVIASYERLIGKDG--ITRI 119 Query: 130 KDIEGKTVAYPPNSTAQYALELAIKVNRLDKSKIRLVPLKPADQVAAWKRGDIDAAYVWG 189 DIEGK VAYPPNSTAQYALE AI VN LD+SKI L+PL+PA+ VAAWKRGDIDA YVW Sbjct: 120 NDIEGKRVAYPPNSTAQYALEAAISVNHLDRSKITLLPLRPAEMVAAWKRGDIDAGYVWA 179 Query: 190 PFTQQFEADGGHEIFVTKQLQKDGYLVYNNFVVRKEFAEKYPQLVVKFLRTYQEKVDQYK 249 PF Q+ EA GGH++F TK LQKDGYL+YNN+VVRK FAE+YPQ V FLR +QEKVD++K Sbjct: 180 PFAQELEASGGHQVFATKDLQKDGYLIYNNYVVRKAFAEQYPQTVSAFLRVHQEKVDEFK 239 Query: 250 KDPDGSAQLIAKHLDIPFETARSVLTGLEYPSSTEQLTPAYLGNGAATPTSGIAKAAKDT 309 KDP+ +A ++AK + P TA + L GLEYP+ T+Q T +LGNG T SGI KA T Sbjct: 240 KDPERAAAIVAKEVGAPVTTAVNTLGGLEYPTLTQQGTADWLGNGTQTTDSGIGKALTKT 299 Query: 310 ANFLVEIGDLRKSDVPESFAPAINISYLKQA 340 ++FL IG++RK D+P ++ AIN Y++ A Sbjct: 300 SDFLAGIGEIRKRDIPANWDSAINSRYIRDA 330 >D8JMV3.1 D8JMV3_ACISD Substrate-binding region of ABC-type glycine betaine transport system Length = 359 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 179/311 (57%), Positives = 239/311 (76%), Gaps = 2/311 (0%) Query: 31 VPQEVRFAWAGGPRVWILGKIDKSFDKSFGAPVKWIPFATGADVLSLFAAKEIDIARFGS 90 +P+EVRFAW GGPRVW+LGK D F+K+ G +KW+ FA+GADV++ FAA EIDIARFGS Sbjct: 50 LPKEVRFAWGGGPRVWVLGKADGDFEKALGTKIKWVEFASGADVINYFAANEIDIARFGS 109 Query: 91 SPAVAGIARKLPIEIISVPEVIATSERLIGRKSKNINSIKDIEGKTVAYPPNSTAQYALE 150 SPAVAGI R LPIEII + +I+ +ERLI R +I +++ + GK VA+P NSTAQYALE Sbjct: 110 SPAVAGITRGLPIEIIGLEGLISGAERLIVRP--DIKNLQGLVGKKVAFPANSTAQYALE 167 Query: 151 LAIKVNRLDKSKIRLVPLKPADQVAAWKRGDIDAAYVWGPFTQQFEADGGHEIFVTKQLQ 210 A+ +N++DKSKI+L+PLKPA+ V+AW RGDIDAAYVWGPFTQQ E +GG EI+ T L Sbjct: 168 QALALNKIDKSKIKLIPLKPAEIVSAWTRGDIDAAYVWGPFTQQLEKEGGKEIYRTTTLN 227 Query: 211 KDGYLVYNNFVVRKEFAEKYPQLVVKFLRTYQEKVDQYKKDPDGSAQLIAKHLDIPFETA 270 + G LVYNNF VRKEFAEK+P LV+KFL+ YQ++VD+YK+DP +++ I+K+L +P++ Sbjct: 228 EKGILVYNNFAVRKEFAEKHPDLVIKFLKAYQDQVDEYKRDPKAASEKISKYLSLPYDQV 287 Query: 271 RSVLTGLEYPSSTEQLTPAYLGNGAATPTSGIAKAAKDTANFLVEIGDLRKSDVPESFAP 330 + L G+EY +Q + YLG + SG+AKA +D A FLV IG+L++SDVP+S+AP Sbjct: 288 ETTLAGIEYIPLKDQASEKYLGATSNDENSGLAKATQDIAKFLVSIGELKQSDVPKSYAP 347 Query: 331 AINISYLKQAV 341 I+ YL +A Sbjct: 348 NIDSKYLIEAT 358