BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0253.p         (321 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T2Z9.1 A6T2Z9_JANMA DnaK suppressor protein                         315   8e-84
D8IUX5.1 D8IUX5_HERSS DnaK suppressor protein                         310   2e-82
A2RQ12.1 A2RQ12_HERSE DnaK suppressor protein                         286   3e-75
A4G985.2 A4G985_HERAR DnaK suppressor protein                         277   2e-72
Q476Y9.1 Q476Y9_CUPPJ Zn-finger, prokaryotic DksA/TraR C4 type        256   4e-66

>A6T2Z9.1 A6T2Z9_JANMA DnaK suppressor protein
          Length = 310

 Score =  315 bits (806), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 151/183 (82%), Positives = 166/183 (90%), Gaps = 6/183 (3%)

Query: 142 GSKASSGKAAKQVASAGLKDKIEKPVVLKVSEVATKTPKTTP---DTQTLLTEEQILKMG 198
            S++++G ++K V+   + DKIEKPVVLK SEVATK+ K+T    DT TLLTE QILKMG
Sbjct: 131 ASRSTTGSSSKAVSK--VVDKIEKPVVLKASEVATKSSKSTSVASDT-TLLTEAQILKMG 187

Query: 199 EKDYMNEAQLAFFKARLQQLERDLLKNAGETTEHLRETVLVPDPADRATIEEEHALELRT 258
           EKDYMN+AQLAFFK RLQQLE+DLLKNA ETTEHLRETVLVPDPADRATIEEEHALELRT
Sbjct: 188 EKDYMNDAQLAFFKNRLQQLEKDLLKNADETTEHLRETVLVPDPADRATIEEEHALELRT 247

Query: 259 RDRERKLLKKVQQSIVSIDSGEYGWCEETGEPIGIPRLLARPTATLSLEAQQRRELKQKL 318
           RDRERKLLKKVQQS++SIDSGEYGWCEETGEPIG+PRLLARPTATLSLEAQQRRELKQKL
Sbjct: 248 RDRERKLLKKVQQSLLSIDSGEYGWCEETGEPIGVPRLLARPTATLSLEAQQRRELKQKL 307

Query: 319 YGD 321
           YGD
Sbjct: 308 YGD 310


>D8IUX5.1 D8IUX5_HERSS DnaK suppressor protein
          Length = 161

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/161 (93%), Positives = 155/161 (96%), Gaps = 1/161 (0%)

Query: 161 DKIEKPVVLKVSEVATKTPKTTPDTQTLLTEEQILKMGEKDYMNEAQLAFFKARLQQLER 220
           D +EKPVVLKVSEVATKTPKTTP  Q LLTEE+ILKM EKDYMNEAQLAFFKARLQQLE+
Sbjct: 2   DIVEKPVVLKVSEVATKTPKTTPAAQ-LLTEEEILKMDEKDYMNEAQLAFFKARLQQLEK 60

Query: 221 DLLKNAGETTEHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVSIDSGE 280
           DLLKNA ETTEHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIV+ID+GE
Sbjct: 61  DLLKNADETTEHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVAIDNGE 120

Query: 281 YGWCEETGEPIGIPRLLARPTATLSLEAQQRRELKQKLYGD 321
           YGWCEETGEPIGIPRLLARPTATLSLEAQQRRELKQKLYGD
Sbjct: 121 YGWCEETGEPIGIPRLLARPTATLSLEAQQRRELKQKLYGD 161


>A2RQ12.1 A2RQ12_HERSE DnaK suppressor protein
          Length = 147

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/148 (93%), Positives = 143/148 (96%), Gaps = 1/148 (0%)

Query: 174 VATKTPKTTPDTQTLLTEEQILKMGEKDYMNEAQLAFFKARLQQLERDLLKNAGETTEHL 233
           +ATKTPKTTP  Q LLTEE+ILKM EKDYMNEAQLAFFKARLQQLE+DLLKNA ETTEHL
Sbjct: 1   MATKTPKTTPAAQ-LLTEEEILKMDEKDYMNEAQLAFFKARLQQLEKDLLKNADETTEHL 59

Query: 234 RETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVSIDSGEYGWCEETGEPIGI 293
           RETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIV+ID+GEYGWCEETGEPIGI
Sbjct: 60  RETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVAIDNGEYGWCEETGEPIGI 119

Query: 294 PRLLARPTATLSLEAQQRRELKQKLYGD 321
           PRLLARPTATLSLEAQQRRELKQKLYGD
Sbjct: 120 PRLLARPTATLSLEAQQRRELKQKLYGD 147


>A4G985.2 A4G985_HERAR DnaK suppressor protein
          Length = 151

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/151 (88%), Positives = 140/151 (92%), Gaps = 3/151 (1%)

Query: 174 VATKTPKTTPD---TQTLLTEEQILKMGEKDYMNEAQLAFFKARLQQLERDLLKNAGETT 230
           +ATK+ KTTP+     TLL+EEQILKM EKDYMN AQLAFFK RLQQLE+DLLKNA ETT
Sbjct: 1   MATKSSKTTPNAANDGTLLSEEQILKMSEKDYMNPAQLAFFKDRLQQLEKDLLKNADETT 60

Query: 231 EHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVSIDSGEYGWCEETGEP 290
           EHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSI SIDSG+YGWCEETGEP
Sbjct: 61  EHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIASIDSGDYGWCEETGEP 120

Query: 291 IGIPRLLARPTATLSLEAQQRRELKQKLYGD 321
           IGIPRLLARPTATLSLEAQQRRELKQKLYGD
Sbjct: 121 IGIPRLLARPTATLSLEAQQRRELKQKLYGD 151


>Q476Y9.1 Q476Y9_CUPPJ Zn-finger, prokaryotic DksA/TraR C4 type
          Length = 228

 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 133/211 (63%), Positives = 160/211 (75%), Gaps = 3/211 (1%)

Query: 113 AASQKAPATAATPAAREVDSKATKSGQAGGSKASSGKAAKQVASAGLKDKIEK-PVVLKV 171
           A + KA +  A PA R   + A  +G+A G   SS  AA Q  ++  +  ++  P   + 
Sbjct: 19  AETLKAQSVKAAPAPRGSTAHA-GAGEAKGGPRSSKTAASQSETSAPRKHVDTAPERTQT 77

Query: 172 SEV-ATKTPKTTPDTQTLLTEEQILKMGEKDYMNEAQLAFFKARLQQLERDLLKNAGETT 230
             V +T+    T  +  LLTE +ILKM +KDYMNEAQLAFFK RL+QL  D+LKNA +TT
Sbjct: 78  PPVGSTRESAATMSSNKLLTEAEILKMSDKDYMNEAQLAFFKHRLEQLRDDILKNADQTT 137

Query: 231 EHLRETVLVPDPADRATIEEEHALELRTRDRERKLLKKVQQSIVSIDSGEYGWCEETGEP 290
           EHLRETV+VPDPADRATIEEEHALELRTRDRERKLLKKV+QS+  I+SG+YGWCEETGEP
Sbjct: 138 EHLRETVIVPDPADRATIEEEHALELRTRDRERKLLKKVEQSLARIESGDYGWCEETGEP 197

Query: 291 IGIPRLLARPTATLSLEAQQRRELKQKLYGD 321
           IG+PRLLARPTATLSLEAQQRREL+QKL+GD
Sbjct: 198 IGVPRLLARPTATLSLEAQQRRELRQKLFGD 228