BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0243.p (494 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0U9.1 D8J0U9_HERSS Membrane-bound lytic peptidoglycan transgl... 501 e-140 A6T1F2.1 A6T1F2_JANMA Membrane-bound lytic murein transglycosyla... 471 e-131 A4G849.1 A4G849_HERAR Membrane-bound lytic murein transglycosyla... 464 e-128 C3XBW5.1 C3XBW5_OXAFO Membrane-bound lytic Murein transglycosyla... 369 e-100 F1VU95.1 F1VU95_9BURK Membrane-bound lytic murein transglycosyla... 352 1e-94 >D8J0U9.1 D8J0U9_HERSS Membrane-bound lytic peptidoglycan transglycosylase B protein EC=2.4.1.129 EC=3.2.1.- Length = 369 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 251/372 (67%), Positives = 291/372 (78%), Gaps = 12/372 (3%) Query: 1 LLRLLGLSALSLACLIPAAVHAESTTRKNQTDKSKSSNTKAKNARQAKPKKKAAPADDGE 60 LL +LGL A + A A A S K Q K+ AK KK +P D GE Sbjct: 4 LLLVLGLCASASALCADNA--AASKAGKAQQHKTGPKKVVAK--------KKTSPEDQGE 53 Query: 61 FANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAYR 120 F NF++WKEV F+DDMV RN F ++ L +LF + RY+D+AIQLIKPAPS KPKNW AYR Sbjct: 54 FVNFNEWKEVARFMDDMVERNHFSRSELNSLFAQTRYLDSAIQLIKPAPSNKPKNWFAYR 113 Query: 121 ARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDAI 180 ARFVEP RINAGVDFWN + +AL+RAEAQYGVP EII GIIGVETVYGRNTGNFRV+DAI Sbjct: 114 ARFVEPVRINAGVDFWNTYGVALARAEAQYGVPMEIIAGIIGVETVYGRNTGNFRVMDAI 173 Query: 181 TTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSIR 240 +TLAFDYP T NR+ARMAFFRGELENTLL ARE+ IDP +L GSYAGAIGWPQFMP SIR Sbjct: 174 STLAFDYPNTPNREARMAFFRGELENTLLLAREAGIDPLTLRGSYAGAIGWPQFMPGSIR 233 Query: 241 QYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATV-TDAGKIDNLINQG 299 +YAVDFDG+GKIDLR+SPVDAIGSVA++L +HGWQRG+P FP TV T+ + + ++NQG Sbjct: 234 EYAVDFDGDGKIDLRNSPVDAIGSVAHYLAVHGWQRGQPVAFPVTVSTENRQWEGMLNQG 293 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 LEAK+S DELRAAGVV + +PA LRFGLVDLQNG PT++W+ T NFFAITQYNRSYFY Sbjct: 294 LEAKYSVDELRAAGVVLPA-VPADLRFGLVDLQNGTNPTEYWIGTANFFAITQYNRSYFY 352 Query: 360 AMSVIDLARGHA 371 AMSV +L R A Sbjct: 353 AMSVAELGRAVA 364 >A6T1F2.1 A6T1F2_JANMA Membrane-bound lytic murein transglycosylase B protein EC=3.2.1.- Length = 372 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 224/309 (72%), Positives = 254/309 (82%) Query: 60 EFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAY 119 EFANFSQW +V+ FID MV +NGF+K LQ+ N+ Y+D+AIQL+KPAP GKPKNW AY Sbjct: 56 EFANFSQWSDVSSFIDQMVEKNGFNKQQLQSTLNQTHYVDSAIQLMKPAPPGKPKNWAAY 115 Query: 120 RARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDA 179 RARFVEP RIN GV FWN++ AL+RAEA+YGVPAEIIV IIGVETVYGRNTGNFRV+DA Sbjct: 116 RARFVEPVRINGGVAFWNQYADALARAEAKYGVPAEIIVAIIGVETVYGRNTGNFRVMDA 175 Query: 180 ITTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSI 239 ITTLAF YP T NR ARM +FRGELENTLLFAR+ IDPFSLLGSYAGAIGWPQFMP SI Sbjct: 176 ITTLAFAYPDTPNRTARMNYFRGELENTLLFARDEQIDPFSLLGSYAGAIGWPQFMPGSI 235 Query: 240 RQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATVTDAGKIDNLINQG 299 R++AVDFDGNG IDLR+SPVDAIGSVANFL HGW+ GEPTVFPA V INQG Sbjct: 236 RKFAVDFDGNGHIDLRNSPVDAIGSVANFLVQHGWRSGEPTVFPAKVDMTENWQRFINQG 295 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 L AKF+ E++ AGV E PA + FGLVDLQNG P+++WL +NFFAITQYNRS+FY Sbjct: 296 LSAKFTLKEMKEAGVTPLVEPPADMLFGLVDLQNGADPSEYWLGADNFFAITQYNRSFFY 355 Query: 360 AMSVIDLAR 368 AMSVIDL+R Sbjct: 356 AMSVIDLSR 364 >A4G849.1 A4G849_HERAR Membrane-bound lytic murein transglycosylase B EC=3.2.1.- Length = 367 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/309 (72%), Positives = 250/309 (80%) Query: 60 EFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAY 119 EFANF+QW++V DFID M +NGFDK LQ +K Y+D+AIQL+KPAP GKPKNW AY Sbjct: 51 EFANFNQWRDVADFIDRMAEKNGFDKKELQNTLSKTHYVDSAIQLMKPAPPGKPKNWAAY 110 Query: 120 RARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDA 179 R+RFVEP RI+AGV FWN + AL+RAE YGVPAEIIV IIGVETVYGRNTGNFRV+DA Sbjct: 111 RSRFVEPVRIDAGVAFWNTYADALTRAEKLYGVPAEIIVAIIGVETVYGRNTGNFRVMDA 170 Query: 180 ITTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSI 239 ITTLAF YP T NR RMA+FRGELENTLLFAR+ IDPFSLLGSYAGAIGWPQFMP SI Sbjct: 171 ITTLAFAYPDTPNRSTRMAYFRGELENTLLFARDEKIDPFSLLGSYAGAIGWPQFMPGSI 230 Query: 240 RQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATVTDAGKIDNLINQG 299 R++AVDFDGNG IDLR+SPVDAIGSVANFL HGW+ GEP VFPATV I QG Sbjct: 231 RKFAVDFDGNGHIDLRNSPVDAIGSVANFLVQHGWRTGEPAVFPATVDMTENWQRFIGQG 290 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 LEAKFS EL+AAGV E P+ + FGLVDLQNG +++WL NFFAITQYNRS+FY Sbjct: 291 LEAKFSVAELKAAGVTPTIEPPSDMLFGLVDLQNGAEASEYWLGAPNFFAITQYNRSFFY 350 Query: 360 AMSVIDLAR 368 AMSVIDL+R Sbjct: 351 AMSVIDLSR 359 >C3XBW5.1 C3XBW5_OXAFO Membrane-bound lytic Murein transglycosylase B Length = 376 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/334 (55%), Positives = 231/334 (69%), Gaps = 7/334 (2%) Query: 42 KNARQAKPKKKAAP-----ADDGEFA-NFSQWKEVNDFIDDMVARNGFDKAALQALFNKA 95 KN Q + ++P + GE A F+ + DFID + DK L LF Sbjct: 31 KNTSQPESTCSSSPNMPGSVESGEAAIPFTIEPPLADFIDRFSTKYHVDKNRLNCLFQGT 90 Query: 96 RYIDTAIQLIKPAPSGKPKNWQAYRARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAE 155 R TAI+L+KP+ SGK KNWQAYR R +EP R+NAGV FWN +E L RAE +YGVPA Sbjct: 91 RVNHTAIRLMKPSGSGKTKNWQAYRQRMIEPVRVNAGVRFWNTYEKYLDRAEKEYGVPAY 150 Query: 156 IIVGIIGVETVYGRNTGNFRVLDAITTLAFDYPKTANRDARMAFFRGELENTLLFARESN 215 IIVGI+G+ET+YGR+TG FR LDA+TTLAF YP+T N+ +R FFR ELE LL + ++ Sbjct: 151 IIVGILGIETIYGRDTGRFRTLDALTTLAFYYPETPNKASRQEFFRKELEQFLLLSSQNQ 210 Query: 216 IDPFSLLGSYAGAIGWPQFMPSSIRQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQ 275 +DP S+ GSYAGAIGWPQFMP SIR YAVDFD +GKIDL +S +DAIGSVANFLK HGW+ Sbjct: 211 VDPLSIYGSYAGAIGWPQFMPGSIRAYAVDFDKDGKIDLENSAIDAIGSVANFLKQHGWK 270 Query: 276 RGEPTVFPATV-TDAGKIDNLINQGLEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNG 334 G+P +FPAT D + L NQGL+A +S EL A + + P L +GLVDL NG Sbjct: 271 TGKPVIFPATADVDCPLPETLFNQGLKATYSLKELNAQCISTDPLAPDNLLYGLVDLPNG 330 Query: 335 DAPTDHWLATNNFFAITQYNRSYFYAMSVIDLAR 368 PT++ + T+NFFAITQYNRSYFYAMSVI+L + Sbjct: 331 PYPTEYRIGTDNFFAITQYNRSYFYAMSVIELGK 364 >F1VU95.1 F1VU95_9BURK Membrane-bound lytic murein transglycosylase B (Fragment) Length = 266 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 170/239 (71%), Positives = 196/239 (82%), Gaps = 1/239 (0%) Query: 46 QAKPKKKAAPADDGEFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLI 105 QA P + ++ GEFA+FSQW V +FID MV R+GFD+A L ALF + Y++ A+QL+ Sbjct: 29 QAAPARPSS-THLGEFADFSQWNAVAEFIDLMVMRHGFDRATLTALFRQTAYVERAVQLM 87 Query: 106 KPAPSGKPKNWQAYRARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVET 165 KPAP+G+PKNW AYRARFVEP RI+ GV FW ++ AL+RAE Q+GVPAEIIV IIGVET Sbjct: 88 KPAPAGRPKNWNAYRARFVEPVRISGGVRFWEDNAAALARAETQFGVPAEIIVAIIGVET 147 Query: 166 VYGRNTGNFRVLDAITTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSY 225 VYGRNTGNFRV+DAITTLAFDYP T R RM +FRGELENTLL+ARES IDP SL GSY Sbjct: 148 VYGRNTGNFRVMDAITTLAFDYPDTPTRLTRMQYFRGELENTLLYARESGIDPLSLEGSY 207 Query: 226 AGAIGWPQFMPSSIRQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPA 284 AGAIG QFMP SIRQYAVDFDG+GKIDLR+S VDAIGSVA+FL HGW+ GEPTVFPA Sbjct: 208 AGAIGLTQFMPGSIRQYAVDFDGDGKIDLRNSQVDAIGSVASFLIKHGWRPGEPTVFPA 266