BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0230.p (337 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q89LN2.1 Q89LN2_BRAJA Blr4511 protein 428 e-118 Q07MM1.1 Q07MM1_RHOP5 TRAP dicarboxylate transporter, DctP subunit 426 e-117 Q2IWM2.1 Q2IWM2_RHOP2 TRAP dicarboxylate transporter DctP subunit 426 e-117 C5CZF5.1 C5CZF5_VARPS TRAP dicarboxylate transporter, DctP subunit 419 e-115 A4YUM4.1 A4YUM4_BRASO Putative TRAP-type C4-dicarboxylate transp... 418 e-115 >Q89LN2.1 Q89LN2_BRAJA Blr4511 protein Length = 339 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 199/338 (58%), Positives = 257/338 (76%), Gaps = 2/338 (0%) Query: 1 MQITRRTVLKAAASAVGIAAVGAPSV-RAQTAVFNYKVATNVPVTHPIYIRLSEAAEKTK 59 M +RRT+LKA+A+ + + AP V RAQ+A F+YK A N+P THP+ +R E A K Sbjct: 1 MSFSRRTLLKASAATAVLGGLSAPHVARAQSAEFSYKYANNLPDTHPLNVRAREMAAAIK 60 Query: 60 AETGGKVDIKVFPNGQLGSDTDLLSQVRSGSVEFLTLPGVILANLVPMASLNSVGFAFHD 119 +ET GK D+++FPN QLGSDTD+LSQ+RSG VEF TL G+IL+ LVP AS+N +GFAF D Sbjct: 61 SETNGKFDLQIFPNNQLGSDTDMLSQIRSGGVEFFTLSGLILSTLVPAASINGIGFAFPD 120 Query: 120 YPAVWKAMDGDLGKYIRSHIEKTNLHVFDKVWDNGFRHITSN-KPINTPAELANMKIRVP 178 Y VWKAMDGDLG ++R I+K L V DK+WDNGFR TS+ +PI P +L KIRVP Sbjct: 121 YDTVWKAMDGDLGAHVRGEIKKAGLEVMDKIWDNGFRQTTSSTRPITGPDDLKGFKIRVP 180 Query: 179 VSPLLLSLFKSLKAAPTPINFNELYSALQTRIVDGQENPFPIITTAKLYEVQKYCAMTSH 238 VSPL S+FK+ AAP INF+E+YSALQT+IV+GQENP II+TAKLYEVQKYC++T+H Sbjct: 181 VSPLWTSMFKAFDAAPASINFSEVYSALQTKIVEGQENPLAIISTAKLYEVQKYCSLTNH 240 Query: 239 AWDGYWLLANKHSFAALPVALQDIITRNFNAAGVNQRADSEKMAADLQQELAAKGLIFSK 298 WDG+W LAN+ +++ALP ++ I+ +N NAA V +R D+ K+ A+LQQELAAKGL F++ Sbjct: 241 MWDGFWFLANRRAWSALPEDVRTIVAKNINAAAVKEREDTAKLNANLQQELAAKGLTFNQ 300 Query: 299 PATAQFRQVLQQSGFYKEWKNKFGEEAWAQLEAAVGKL 336 PA A FR L+ +GFY EWK K+G++AW LE AVGKL Sbjct: 301 PAVAPFRDKLRTAGFYAEWKGKYGDQAWDLLEKAVGKL 338 >Q07MM1.1 Q07MM1_RHOP5 TRAP dicarboxylate transporter, DctP subunit Length = 339 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 200/338 (59%), Positives = 257/338 (76%), Gaps = 2/338 (0%) Query: 1 MQITRRTVLKAAASAVGIAAVGAPSV-RAQTAVFNYKVATNVPVTHPIYIRLSEAAEKTK 59 M ++RRT+LKA+A+A I +GAP V RA A F+YK A N+P THP+ IR E A K Sbjct: 1 MSVSRRTLLKASAAATVIGGLGAPFVARAAEAEFSYKYANNLPDTHPMNIRAREMAAAIK 60 Query: 60 AETGGKVDIKVFPNGQLGSDTDLLSQVRSGSVEFLTLPGVILANLVPMASLNSVGFAFHD 119 AETGG+V+I++FP+ QLGSDTD+LSQ+RSG VEF TL G+ILA LVP AS+N +GFAF D Sbjct: 61 AETGGRVEIQIFPSNQLGSDTDMLSQIRSGGVEFFTLSGLILATLVPAASINGIGFAFPD 120 Query: 120 YPAVWKAMDGDLGKYIRSHIEKTNLHVFDKVWDNGFRHITSN-KPINTPAELANMKIRVP 178 Y VWKAMDG+LG ++R I K NL V DK+WDNGFR TS+ KPI P + KIRVP Sbjct: 121 YETVWKAMDGELGAHVRGEIGKANLVVMDKIWDNGFRQTTSSSKPITGPDDFKGFKIRVP 180 Query: 179 VSPLLLSLFKSLKAAPTPINFNELYSALQTRIVDGQENPFPIITTAKLYEVQKYCAMTSH 238 VSPL S+FK+ A+P INF+E+YSALQT++V+GQENP II+TAKLYEVQKYC++T+H Sbjct: 181 VSPLWTSMFKAFDASPASINFSEVYSALQTKVVEGQENPLAIISTAKLYEVQKYCSLTNH 240 Query: 239 AWDGYWLLANKHSFAALPVALQDIITRNFNAAGVNQRADSEKMAADLQQELAAKGLIFSK 298 WDG+W LANK ++ LP L+ I+ +N NAAG+NQRAD K+ A L+ +LAAKGL F++ Sbjct: 241 MWDGFWFLANKRAWERLPEDLRAIVAKNINAAGINQRADVAKLNAGLKDDLAAKGLAFNQ 300 Query: 299 PATAQFRQVLQQSGFYKEWKNKFGEEAWAQLEAAVGKL 336 PA FR+ L+++GFY EWK K+G++AW+ LE A G L Sbjct: 301 PAITPFREKLRKAGFYAEWKGKYGDQAWSLLEKATGSL 338 >Q2IWM2.1 Q2IWM2_RHOP2 TRAP dicarboxylate transporter DctP subunit Length = 339 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 199/338 (58%), Positives = 252/338 (74%), Gaps = 2/338 (0%) Query: 1 MQITRRTVLKAAASAVGIAAVGAPSV-RAQTAVFNYKVATNVPVTHPIYIRLSEAAEKTK 59 M ++RRT+L+A+A+AV + +GAP V RA A F YK A N+P THP+ IR E A K Sbjct: 1 MSVSRRTLLQASAAAVALGGIGAPFVARAAEAEFVYKYANNLPDTHPMNIRAREMAAAIK 60 Query: 60 AETGGKVDIKVFPNGQLGSDTDLLSQVRSGSVEFLTLPGVILANLVPMASLNSVGFAFHD 119 AET G+V I +FP+ QLGSDTD+LSQ+RSG VEF TL G+IL+ LVP AS+N +GFAF D Sbjct: 61 AETNGRVQIDIFPSNQLGSDTDMLSQIRSGGVEFFTLSGLILSTLVPAASINGIGFAFPD 120 Query: 120 YPAVWKAMDGDLGKYIRSHIEKTNLHVFDKVWDNGFRHIT-SNKPINTPAELANMKIRVP 178 Y VWKAMDG+LG Y+R I K L V DK+WDNGFR T S +PI P + +KIRVP Sbjct: 121 YDTVWKAMDGELGGYVRGEIGKAGLVVMDKIWDNGFRQTTTSTRPITGPDDFKGLKIRVP 180 Query: 179 VSPLLLSLFKSLKAAPTPINFNELYSALQTRIVDGQENPFPIITTAKLYEVQKYCAMTSH 238 VSPL S+FK+ A+P INF+E+YSALQT++V+GQENP II+TAKLYEVQKYC++T+H Sbjct: 181 VSPLWTSMFKAFDASPASINFSEVYSALQTKVVEGQENPLAIISTAKLYEVQKYCSLTNH 240 Query: 239 AWDGYWLLANKHSFAALPVALQDIITRNFNAAGVNQRADSEKMAADLQQELAAKGLIFSK 298 WDG+W LAN+ ++ LP L+DI+ RN NAAGVNQRAD K+ A L+ ELA KGL F++ Sbjct: 241 MWDGFWFLANRRAWERLPADLRDIVARNINAAGVNQRADVAKLNAGLKDELATKGLTFNQ 300 Query: 299 PATAQFRQVLQQSGFYKEWKNKFGEEAWAQLEAAVGKL 336 P FR L+ +GFY EWK K+GE+AW+ LE +VGKL Sbjct: 301 PTIGPFRDKLRAAGFYAEWKGKYGEQAWSLLEKSVGKL 338 >C5CZF5.1 C5CZF5_VARPS TRAP dicarboxylate transporter, DctP subunit Length = 337 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 256/337 (75%), Gaps = 2/337 (0%) Query: 1 MQITRRTVLKAAASAVGIAAVGAPSVRAQTAVFNYKVATNVPVTHPIYIRLSEAAEKTKA 60 M ITRRTVL++ A A +A V AQ A FNYK A N+PVTHP+ IR E A+ +A Sbjct: 1 MSITRRTVLRSTALAASLA-VPMHRAFAQKAEFNYKYANNLPVTHPLNIRAKEMADAIRA 59 Query: 61 ETGGKVDIKVFPNGQLGSDTDLLSQVRSGSVEFLTLPGVILANLVPMASLNSVGFAFHDY 120 ETGG+VDI++FP+ QLGSDTD+LSQ+RSG VEF TL G+IL+ LVP AS++ VGFAF+DY Sbjct: 60 ETGGRVDIQIFPSNQLGSDTDVLSQLRSGGVEFFTLSGLILSTLVPSASISGVGFAFNDY 119 Query: 121 PAVWKAMDGDLGKYIRSHIEKTNLHVFDKVWDNGFRHITSN-KPINTPAELANMKIRVPV 179 +VWKAMDG+LG +IR I K N+ +K+WDNGFR ITS+ + I P ++ KIRVPV Sbjct: 120 ASVWKAMDGELGAHIRQQIAKANIVPMEKIWDNGFRQITSSSRAIAAPQDMKGFKIRVPV 179 Query: 180 SPLLLSLFKSLKAAPTPINFNELYSALQTRIVDGQENPFPIITTAKLYEVQKYCAMTSHA 239 SPL S+FK+L AAPT INF E+YSALQT+IVDGQENP II TAKLYEVQKYC++++H Sbjct: 180 SPLWTSMFKALDAAPTSINFAEVYSALQTKIVDGQENPLAIIATAKLYEVQKYCSLSNHM 239 Query: 240 WDGYWLLANKHSFAALPVALQDIITRNFNAAGVNQRADSEKMAADLQQELAAKGLIFSKP 299 WDG+W LAN+ ++ LP L+ ++ R+ NAAG+ +RAD ++ A LQ+ELAAKG+ F++P Sbjct: 240 WDGFWFLANRRAWDKLPADLRTVVARHINAAGMKERADVAELNAGLQKELAAKGMAFNQP 299 Query: 300 ATAQFRQVLQQSGFYKEWKNKFGEEAWAQLEAAVGKL 336 A FR L+++GFY EWK K+G+EAWA LE + GKL Sbjct: 300 DAAAFRDQLRKAGFYSEWKAKYGDEAWALLERSAGKL 336 >A4YUM4.1 A4YUM4_BRASO Putative TRAP-type C4-dicarboxylate transport system, periplasmic component (DctP-like) Length = 331 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 195/330 (59%), Positives = 249/330 (75%), Gaps = 2/330 (0%) Query: 9 LKAAASAVGIAAVGAPSV-RAQTAVFNYKVATNVPVTHPIYIRLSEAAEKTKAETGGKVD 67 +KA+A++ + + AP V RAQ+A F YK A N+P THP+ +R E A KAET GK D Sbjct: 1 MKASAASAVLGGIAAPHVARAQSAEFTYKYANNLPDTHPLNVRAKEMAAAIKAETNGKFD 60 Query: 68 IKVFPNGQLGSDTDLLSQVRSGSVEFLTLPGVILANLVPMASLNSVGFAFHDYPAVWKAM 127 +++FPN QLGSDTD+LSQ+RSG VEF TL G+ILA LVP AS+N +GFAF DY VWKAM Sbjct: 61 LQIFPNNQLGSDTDMLSQIRSGGVEFFTLSGLILATLVPAASINGIGFAFPDYDTVWKAM 120 Query: 128 DGDLGKYIRSHIEKTNLHVFDKVWDNGFRHITSN-KPINTPAELANMKIRVPVSPLLLSL 186 DGDLG Y+R I K+ L V DK+WDNGFR TS+ KPIN P +L KIRVPVSPL S+ Sbjct: 121 DGDLGAYVRGQITKSGLMVMDKIWDNGFRQTTSSTKPINGPDDLKGFKIRVPVSPLWTSM 180 Query: 187 FKSLKAAPTPINFNELYSALQTRIVDGQENPFPIITTAKLYEVQKYCAMTSHAWDGYWLL 246 FK+ +AAP INF+E+YSALQT++V+GQENP II+TAKLYEVQKYC++T+H WDG+W L Sbjct: 181 FKAFEAAPASINFSEVYSALQTKVVEGQENPLAIISTAKLYEVQKYCSLTNHMWDGFWFL 240 Query: 247 ANKHSFAALPVALQDIITRNFNAAGVNQRADSEKMAADLQQELAAKGLIFSKPATAQFRQ 306 AN+ ++ A+P ++ I+ ++ NAA V +R D K+ A LQQ+LA KGL F++P A FR Sbjct: 241 ANRRAWEAVPADMRAIVAKHINAAAVKEREDVAKLNAGLQQDLATKGLTFNQPNVAPFRD 300 Query: 307 VLQQSGFYKEWKNKFGEEAWAQLEAAVGKL 336 L+ +GFY EWK K+G+EAWA LE AVGKL Sbjct: 301 KLRTAGFYAEWKGKYGDEAWALLEKAVGKL 330