BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0227.p (230 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q89CI4.1 Q89CI4_BRAJA Transcriptional regulatory protein 152 4e-35 A8TV46.1 A8TV46_9PROT Transcriptional regulatory protein 146 2e-33 E6PSC3.1 E6PSC3_9ZZZZ Transcriptional regulator-like protein pro... 138 8e-31 B9KVW2.1 B9KVW2_RHOSK Transcriptional regulator, GntR family 137 1e-30 A3PQX3.1 A3PQX3_RHOS1 Transcriptional regulator, GntR family 137 1e-30 >Q89CI4.1 Q89CI4_BRAJA Transcriptional regulatory protein Length = 225 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/216 (44%), Positives = 136/216 (62%), Gaps = 10/216 (4%) Query: 12 IEKVYDRLLEAITSGDLKPGERVRQSALADRLGVSRQPISHALQLLRYQGLVRDAGKQGV 71 I++VY R+LEAI+ L+PG+R+RQ+ LAD+LGVSRQP+SHAL LL QGLV ++G++G Sbjct: 11 IDQVYGRILEAISDRTLQPGQRIRQNELADKLGVSRQPVSHALHLLHRQGLVAESGRRGF 70 Query: 72 EVSPVNPDYIVHLYHARVSLESSAAAMAAQRVKDGLAPKDDIDALKETIELGVSAMR--- 128 EV+ ++P I LY R ++++ AA +AA R A + +E+ ++A R Sbjct: 71 EVTQLDPARIRQLYEVRGAIDALAARLAAMRAASDAAG-------RARLEVALAAGRRID 123 Query: 129 HNAPLSVLVKADFRFHMAIYRLSGNPAIEQIMAGQWPHLMRSMMAVLNDPGVPVRAWEEH 188 PL+ L+ D FH AIY+L+GNP IE+ +A QWPH+ RSM VL++ AW EH Sbjct: 124 RKTPLAELIVLDVDFHRAIYQLAGNPVIEETIAPQWPHMRRSMATVLSELDYRDSAWAEH 183 Query: 189 QIIATHIFAGVVDEAFQAAARHIERAGRDLAKRLSA 224 IA HI AG A +AA H + AGR +RL A Sbjct: 184 ADIAAHILAGDAKAAERAALAHAQTAGRMTEERLRA 219 >A8TV46.1 A8TV46_9PROT Transcriptional regulatory protein Length = 230 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 85/219 (38%), Positives = 122/219 (55%), Gaps = 3/219 (1%) Query: 4 SIDQNTLYIEKVYDRLLEAITSGDLKPGERVRQSALADRLGVSRQPISHALQLLRYQGLV 63 +++ + I++VY+RL++AI+ G L PG+R+RQ LA LGVSRQP+SHAL +L+ GL Sbjct: 5 TLESRPVLIDQVYERLVDAISIGSLPPGQRLRQEKLAADLGVSRQPVSHALAMLKSSGLA 64 Query: 64 RDAGKQGVEVSPVNPDYIVHLYHARVSLESSAAAMAAQRVKDGLAPKDDIDALKETIELG 123 + G +G+ V+P++P + HLY R +E +A +AAQRV P ++ AL E + G Sbjct: 65 VEQGVRGLVVAPIDPQRLYHLYEVRAVMEGLSARLAAQRVAAD--PTLEVTALSEALAKG 122 Query: 124 VSAMRHNAPLSVLVKADFRFHMAIYRLSGNPAIEQIMAGQWPHLMRSMMAVLNDPGVPVR 183 +A + V D FH AI LSGNP + ++ Q P + R M V D + R Sbjct: 123 AAA-EQVGDIPAAVDWDLAFHSAINVLSGNPVLTEVSDSQRPQIRRVMAVVKTDRSLATR 181 Query: 184 AWEEHQIIATHIFAGVVDEAFQAAARHIERAGRDLAKRL 222 W EH IA I G A A H RAG + +RL Sbjct: 182 IWLEHTAIADAIRVGDAATAETLAREHAARAGEETRRRL 220 >E6PSC3.1 E6PSC3_9ZZZZ Transcriptional regulator-like protein protein Length = 234 Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 89/224 (39%), Positives = 133/224 (59%), Gaps = 9/224 (4%) Query: 1 MQNSIDQNT--LYIEKVYDRLLEAITSGDLKPGERVRQSALADRLGVSRQPISHALQLLR 58 +Q SI Q + LY E+VY +LEAI G L+PG+R+ Q LA RL VSRQP++ AL +LR Sbjct: 15 IQISIPQTSPSLY-EQVYSSILEAICGGILRPGDRLNQDELAARLNVSRQPVTQALTVLR 73 Query: 59 YQGLVRDAGKQGVEVSPVNPDYIVHLYHARVSLESSAAAMAAQRVKDGLAPKDDIDALKE 118 Q V+D+G++G+ V+P+ + LY R SL+ AA +AA R D L+ ++ DAL Sbjct: 74 SQDFVQDSGRRGLLVAPIRRAFFESLYELRESLDPMAAKLAA-RHSDKLS-RERADAL-- 129 Query: 119 TIELGVSAMRHNAPLSVLVKADFRFHMAIYRLSGNPAIEQIMAGQWPHLMRSMMAVLNDP 178 +E G +A+R + ++ L AD FHM IY +GNP + + + W HL R+M+ VL Sbjct: 130 -MERGHAALR-DGRIAELTSADMSFHMWIYESAGNPLLLETLRLYWNHLRRAMVTVLEPS 187 Query: 179 GVPVRAWEEHQIIATHIFAGVVDEAFQAAARHIERAGRDLAKRL 222 V R W+EH I + +G EA + + HI++A + + L Sbjct: 188 TVRDRVWDEHARILDAVLSGDQQEAERLSLLHIQQAAQRVVGNL 231 >B9KVW2.1 B9KVW2_RHOSK Transcriptional regulator, GntR family Length = 216 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 6/203 (2%) Query: 12 IEKVYDRLLEAITSGDLKPGERVRQSALADRLGVSRQPISHALQLLRYQGLVRDAGKQGV 71 +E+ YD LLEAI +GD+K G+R+ Q LA RL VSRQPI+ A+ +L+ Q V+D GK+GV Sbjct: 11 VEQAYDALLEAICTGDIKAGDRLNQDELALRLNVSRQPINSAIAMLKAQRFVQDTGKRGV 70 Query: 72 EVSPVNPDYIVHLYHARVSLESSAAAMAAQRVKDGLAPKDDIDALKETIELGVSAMRHNA 131 V+P++ + +Y R ++E A +A R+ + + I ++ I G S ++ Sbjct: 71 IVAPIDQNLFDSIYQFRTAIEPLAVELAVTRMTN-----EAITIGRDIIARGKSCVQSGD 125 Query: 132 PLSVLVKADFRFHMAIYRLSGNPAIEQIMAGQWPHLMRSMMAVLNDPGVPVRAWEEHQII 191 + L +AD FH IYRLSGN I M W HL R+M VL+ PG +R W+EH I Sbjct: 126 HAAAL-RADMDFHGLIYRLSGNLIIADTMTLNWRHLQRAMSEVLSVPGTTLRVWKEHDQI 184 Query: 192 ATHIFAGVVDEAFQAAARHIERA 214 + G D A H+E A Sbjct: 185 FNAMVRGDGDSAAGLMKAHMENA 207 >A3PQX3.1 A3PQX3_RHOS1 Transcriptional regulator, GntR family Length = 216 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 6/203 (2%) Query: 12 IEKVYDRLLEAITSGDLKPGERVRQSALADRLGVSRQPISHALQLLRYQGLVRDAGKQGV 71 +E+ YD LLEAI +GD+K G+R+ Q LA RL VSRQPI+ A+ +L+ Q V+D GK+GV Sbjct: 11 VEQAYDALLEAICTGDIKAGDRLNQDELALRLNVSRQPINSAIAMLKAQRFVQDTGKRGV 70 Query: 72 EVSPVNPDYIVHLYHARVSLESSAAAMAAQRVKDGLAPKDDIDALKETIELGVSAMRHNA 131 V+P++ + +Y R ++E A +A R+ + + I ++ I G S ++ Sbjct: 71 IVAPIDQNLFDSIYQFRTAIEPLAVELAVTRMTN-----EAITIGRDIIARGKSCVQSGD 125 Query: 132 PLSVLVKADFRFHMAIYRLSGNPAIEQIMAGQWPHLMRSMMAVLNDPGVPVRAWEEHQII 191 + L +AD FH IYRLSGN I M W HL R+M VL+ PG +R W+EH I Sbjct: 126 HAAAL-RADMDFHGLIYRLSGNLIIADTMTLNWRHLQRAMSEVLSVPGTTLRVWKEHDQI 184 Query: 192 ATHIFAGVVDEAFQAAARHIERA 214 + G D A H+E A Sbjct: 185 FNAMVRGDGDSAAGLMKAHMENA 207