BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0184.p         (93 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IRC8.1 D8IRC8_HERSS Two component sensor histidine kinase prot...   112   1e-23
A4G5J6.1 A4G5J6_HERAR Sensor protein KdpD EC=2.7.13.3                 112   3e-23
B9CBH0.1 B9CBH0_9BURK Sensor protein KdpD EC=2.7.13.3                 106   1e-21
B9BQ58.1 B9BQ58_9BURK Osmosensitive K+ channel His kinase sensor...   106   1e-21
B1YTU2.1 B1YTU2_BURA4 Osmosensitive K+ channel signal transducti...   106   1e-21

>D8IRC8.1 D8IRC8_HERSS Two component sensor histidine kinase protein
           EC=2.7.3.-
          Length = 939

 Score =  112 bits (281), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 64/82 (78%)

Query: 11  MEISVIDRGPGFPAGMEERAFEKFTRGDTESSTPGVGLGLAICRAIVDAHGGTIRALPAE 70
           +++ V+D+G GFP  M + AFEKFTRGD ES+TPGVGLGLAICRAI++AH G I   P E
Sbjct: 858 VKVCVMDQGRGFPPTMTQHAFEKFTRGDNESATPGVGLGLAICRAIIEAHQGRIWIAPQE 917

Query: 71  GGRGARVCFTLPLDKPPALPEE 92
            G+GA VCFTLP++  PA PEE
Sbjct: 918 AGQGATVCFTLPVETQPAPPEE 939


>A4G5J6.1 A4G5J6_HERAR Sensor protein KdpD EC=2.7.13.3
          Length = 921

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 1/93 (1%)

Query: 1   VVDAKANAGLMEISVIDRGPGFPAGMEERAFEKFTRGDTESSTPGVGLGLAICRAIVDAH 60
           V+ A+ +   +E+SV D GPG PAG EE  F+KFTRG+ ES+TPGVGLGLAICRAIV+AH
Sbjct: 822 VIAAEISGRFLEVSVYDNGPGLPAGQEEAIFDKFTRGERESATPGVGLGLAICRAIVEAH 881

Query: 61  GGTIRALPAEGGRGARVCFTLPLDKPPALPEEE 93
            GTIRA  +  G GA + FTLPL  PPA+ E E
Sbjct: 882 QGTIRAAHSPDG-GASINFTLPLGTPPAIDESE 913


>B9CBH0.1 B9CBH0_9BURK Sensor protein KdpD EC=2.7.13.3
          Length = 951

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 7/91 (7%)

Query: 10  LMEISVIDRGPGFPAGMEERAFEKFTRGDTESSTPGVGLGLAICRAIVDAHGGTIRAL-- 67
            + + V DRGPG PAGME R F+KFTRG+ ES+TPG+GLGLAICRAIV+AHGG I AL  
Sbjct: 844 FVRVHVDDRGPGLPAGMETRIFDKFTRGEKESATPGIGLGLAICRAIVEAHGGRIGALNR 903

Query: 68  PAEGGR--GARVCFTLPLDKP---PALPEEE 93
            A  GR  GAR  FTLP+D P   PA+P++E
Sbjct: 904 TAPDGRVTGARFWFTLPVDTPPDTPAVPDDE 934


>B9BQ58.1 B9BQ58_9BURK Osmosensitive K+ channel His kinase sensor domain
           family
          Length = 951

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 7/91 (7%)

Query: 10  LMEISVIDRGPGFPAGMEERAFEKFTRGDTESSTPGVGLGLAICRAIVDAHGGTIRAL-- 67
            + + V DRGPG PAGME R F+KFTRG+ ES+TPG+GLGLAICRAIV+AHGG I AL  
Sbjct: 844 FVRVHVDDRGPGLPAGMETRIFDKFTRGEKESATPGIGLGLAICRAIVEAHGGRIGALNR 903

Query: 68  PAEGGR--GARVCFTLPLDKP---PALPEEE 93
            A  GR  GAR  FTLP+D P   PA+P++E
Sbjct: 904 TAPDGRVTGARFWFTLPVDTPPDTPAVPDDE 934


>B1YTU2.1 B1YTU2_BURA4 Osmosensitive K+ channel signal transduction histidine
           kinase
          Length = 945

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 4/85 (4%)

Query: 10  LMEISVIDRGPGFPAGMEERAFEKFTRGDTESSTPGVGLGLAICRAIVDAHGGTIRALPA 69
            + + V D GPG P+GME R F+KFTRG+ ES+TPG+GLGLAICRAIV+AHGG I AL  
Sbjct: 838 FVRVHVDDHGPGLPSGMETRIFDKFTRGEKESATPGIGLGLAICRAIVEAHGGRIGALNR 897

Query: 70  EG--GR--GARVCFTLPLDKPPALP 90
            G  GR  GAR  FTLP+D PPA+P
Sbjct: 898 TGPDGRVTGARFWFTLPVDTPPAVP 922