BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0183.p (233 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRC7.1 D8IRC7_HERSS Two component response regulator protein 372 e-101 B2T2B6.1 B2T2B6_BURPP Two component transcriptional regulator, w... 302 3e-80 Q142K5.1 Q142K5_BURXL Two component transcriptional regulator, w... 302 3e-80 D5NJV6.1 D5NJV6_9BURK Two component transcriptional regulator, w... 301 4e-80 E1T3S1.1 E1T3S1_BURSG Two component transcriptional regulator, w... 301 6e-80 >D8IRC7.1 D8IRC7_HERSS Two component response regulator protein Length = 236 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/232 (77%), Positives = 210/232 (90%), Gaps = 3/232 (1%) Query: 1 MLDHAGNIVFVEDDAHIRKLVRGALEQEGFIVHEARTAREGMVEAGTRKPDLVIVDLGLP 60 M +HAGNIVF+EDD HIRKLVR ALEQEGF+VHEA++AREG+ EAGTRKPDL+I+DLGLP Sbjct: 1 MQEHAGNIVFIEDDPHIRKLVRSALEQEGFVVHEAKSAREGVTEAGTRKPDLIILDLGLP 60 Query: 61 DQDGKQVIADIRSWSDVPIVILSARTQEAEKVAALDAGADDYLTKPFGVPELLARIRAQL 120 D DGKQVI++IR+WS VPIVILSARTQE+EKV ALDAGADDYL KPFG+PELLAR+RAQL Sbjct: 61 DGDGKQVISEIRNWSSVPIVILSARTQESEKVEALDAGADDYLVKPFGMPELLARMRAQL 120 Query: 121 RRRSQASAA---TGRFRLGDLLIDLPARTASKGGEAVHLTQIEHRLIATLLRDAGRVITH 177 RR ++AS+A +GR+RLGD+++DLPAR+ S+ GEA+HLTQIE+RL++TLLRDAGRVITH Sbjct: 121 RRHARASSAGQSSGRYRLGDVVVDLPARSVSRHGEALHLTQIEYRLLSTLLRDAGRVITH 180 Query: 178 RTLLAAGWGPSHTEDHHYLRIYMQRLRQKLEDDPAQPKHIVTEIGVGYRIVN 229 R LL AGWGPSH ED HYLRIYMQRLRQKLE D AQP HI+TEIGVGYR+ + Sbjct: 181 RQLLVAGWGPSHAEDGHYLRIYMQRLRQKLERDAAQPVHILTEIGVGYRVAD 232 >B2T2B6.1 B2T2B6_BURPP Two component transcriptional regulator, winged helix family Length = 232 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 149/231 (64%), Positives = 180/231 (77%), Gaps = 1/231 (0%) Query: 1 MLDHAGNIVFVEDDAHIRKLVRGALEQEGFIVHEARTAREGMVEAGTRKPDLVIVDLGLP 60 M D + +V +ED+ IR+ VR ALE EG +VH+A T ++G+VEA TRKPDLVIVDLGLP Sbjct: 1 MSDPSITVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLP 60 Query: 61 DQDGKQVIADIRSWSDVPIVILSARTQEAEKVAALDAGADDYLTKPFGVPELLARIRAQL 120 D DG VI ++R WS++P+++LSARTQE+EKVAALDAGADDYLTKPFGV ELLARIRA + Sbjct: 61 DTDGLDVIRELRGWSELPVIVLSARTQESEKVAALDAGADDYLTKPFGVSELLARIRAHM 120 Query: 121 RRRSQASA-ATGRFRLGDLLIDLPARTASKGGEAVHLTQIEHRLIATLLRDAGRVITHRT 179 RRR+Q A T + R G + +DL R S+ G VHLT IE+RL+ATL+R AGRV+THR Sbjct: 121 RRRNQGGANETPQVRFGTVTVDLALRQVSRDGAVVHLTPIEYRLLATLVRHAGRVLTHRQ 180 Query: 180 LLAAGWGPSHTEDHHYLRIYMQRLRQKLEDDPAQPKHIVTEIGVGYRIVNA 230 LL WGPSH E HHYLRIYM LR KLE DPAQP+HI+TE GVGYR+V A Sbjct: 181 LLREVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIITETGVGYRLVGA 231 >Q142K5.1 Q142K5_BURXL Two component transcriptional regulator, winged helix family Length = 232 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 149/231 (64%), Positives = 180/231 (77%), Gaps = 1/231 (0%) Query: 1 MLDHAGNIVFVEDDAHIRKLVRGALEQEGFIVHEARTAREGMVEAGTRKPDLVIVDLGLP 60 M D + +V +ED+ IR+ VR ALE EG +VH+A T ++G+VEA TRKPDLVIVDLGLP Sbjct: 1 MTDPSITVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLP 60 Query: 61 DQDGKQVIADIRSWSDVPIVILSARTQEAEKVAALDAGADDYLTKPFGVPELLARIRAQL 120 D DG VI ++R WS++P+++LSARTQE EKVAALDAGADDYLTKPFGV ELLARIRA + Sbjct: 61 DTDGLDVIRELRGWSELPVIVLSARTQETEKVAALDAGADDYLTKPFGVSELLARIRAHM 120 Query: 121 RRRSQASA-ATGRFRLGDLLIDLPARTASKGGEAVHLTQIEHRLIATLLRDAGRVITHRT 179 RRR+Q A + + R G + +DL R S+ G AVHLT IE+RL+ATL+R AGRV+THR Sbjct: 121 RRRNQGGANESPQVRFGTVTVDLALRQVSRDGAAVHLTPIEYRLLATLVRHAGRVLTHRQ 180 Query: 180 LLAAGWGPSHTEDHHYLRIYMQRLRQKLEDDPAQPKHIVTEIGVGYRIVNA 230 LL WGPSH E HHYLRIYM LR KLE DPAQP+HI+TE GVGYR+V A Sbjct: 181 LLREVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIITETGVGYRLVGA 231 >D5NJV6.1 D5NJV6_9BURK Two component transcriptional regulator, winged helix family Length = 232 Score = 301 bits (772), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 149/231 (64%), Positives = 180/231 (77%), Gaps = 1/231 (0%) Query: 1 MLDHAGNIVFVEDDAHIRKLVRGALEQEGFIVHEARTAREGMVEAGTRKPDLVIVDLGLP 60 M D + +V +ED+ IR+ VR ALE EG +VH+A T ++G+VEA TRKPDLVIVDLGLP Sbjct: 1 MSDPSITVVLIEDEKQIRRFVRTALEGEGIVVHDAETGKQGLVEAATRKPDLVIVDLGLP 60 Query: 61 DQDGKQVIADIRSWSDVPIVILSARTQEAEKVAALDAGADDYLTKPFGVPELLARIRAQL 120 D DG VI ++R WS++P+++LSARTQE EKVAALDAGADDYLTKPFGV ELLARIRA + Sbjct: 61 DTDGLDVIRELRGWSELPVIVLSARTQETEKVAALDAGADDYLTKPFGVSELLARIRAHM 120 Query: 121 RRRSQASA-ATGRFRLGDLLIDLPARTASKGGEAVHLTQIEHRLIATLLRDAGRVITHRT 179 RRR+Q A + + R G + +DL R S+ G AVHLT IE+RL+ATL+R AGRV+THR Sbjct: 121 RRRNQGGANESPQVRFGTVTVDLALRQVSRDGAAVHLTPIEYRLLATLVRHAGRVLTHRQ 180 Query: 180 LLAAGWGPSHTEDHHYLRIYMQRLRQKLEDDPAQPKHIVTEIGVGYRIVNA 230 LL WGPSH E HHYLRIYM LR KLE DPAQP+HI+TE GVGYR+V A Sbjct: 181 LLREVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIITETGVGYRLVGA 231 >E1T3S1.1 E1T3S1_BURSG Two component transcriptional regulator, winged helix family Length = 232 Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 149/230 (64%), Positives = 180/230 (78%), Gaps = 1/230 (0%) Query: 1 MLDHAGNIVFVEDDAHIRKLVRGALEQEGFIVHEARTAREGMVEAGTRKPDLVIVDLGLP 60 M D + +V +ED+ IR+ VR ALE EG +VH+A T ++G+VEA TRKPDLVIVDLGLP Sbjct: 1 MSDLSTTVVLIEDEKQIRRFVRAALEGEGMVVHDAETGKQGLVEAATRKPDLVIVDLGLP 60 Query: 61 DQDGKQVIADIRSWSDVPIVILSARTQEAEKVAALDAGADDYLTKPFGVPELLARIRAQL 120 D DG VI ++R WS++P+++LSARTQE+EKVAALDAGADDYLTKPFGV ELLARIRA L Sbjct: 61 DTDGLDVIRELRGWSELPVIVLSARTQESEKVAALDAGADDYLTKPFGVSELLARIRAHL 120 Query: 121 RRRSQASA-ATGRFRLGDLLIDLPARTASKGGEAVHLTQIEHRLIATLLRDAGRVITHRT 179 RRR+Q A + + R G + +DL R ++ G AVHLT IE+RL+ATL+R AGRV+THR Sbjct: 121 RRRNQGGANESPQVRFGAVSVDLALRQVTRDGAAVHLTPIEYRLLATLVRHAGRVLTHRQ 180 Query: 180 LLAAGWGPSHTEDHHYLRIYMQRLRQKLEDDPAQPKHIVTEIGVGYRIVN 229 LL WGPSH E HHYLRIYM LR KLE DPAQP+HIVTE GVGYR+V Sbjct: 181 LLRDVWGPSHVESHHYLRIYMAHLRGKLERDPAQPEHIVTETGVGYRLVG 230