BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0163.p (276 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8INU7.1 D8INU7_HERSS Methyl-accepting chemotaxis I (Serine chem... 285 6e-75 B3EAL3.1 B3EAL3_GEOLS Methyl-accepting chemotaxis sensory transd... 84 3e-14 D2UEN8.1 D2UEN8_XANAP Putative methyl-accepting chemotaxis protein 80 2e-13 D2UEN9.1 D2UEN9_XANAP Putative methyl-accepting chemotaxis protein 79 8e-13 F0C243.1 F0C243_9XANT Methyl-accepting chemotaxis protein 79 1e-12 >D8INU7.1 D8INU7_HERSS Methyl-accepting chemotaxis I (Serine chemoreceptor) transmembrane protein Length = 574 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 141/217 (64%), Positives = 181/217 (83%) Query: 1 MISNIKIGARLALGFCLVLLCAAAILLNGLWRMTQMESSSAYIIDQKVASMTAAMSMRES 60 MI +KIG+RLA GFCL+LL A AILL GLWRM ++E++S Y+ID+KVA+MTAA++MRE+ Sbjct: 1 MIQRLKIGSRLAFGFCLILLLATAILLIGLWRMAELEAASEYVIDEKVAAMTAALNMREA 60 Query: 61 GSALALALRKVVTPTDAAEGQQENQRLAKILQAYAGYEGQLTKLTSTDKGKALLTASAAE 120 GS LALALRKVVTPTDAAEG+ E+ L+KILQAYAG+E Q+T+L+ +GK LLTA++ + Sbjct: 61 GSQLALALRKVVTPTDAAEGKAEDAHLSKILQAYAGFEKQITELSPAGRGKELLTAASGQ 120 Query: 121 RKVLFPIVEKIREMVGAGNYFDAAQLLKSDFLPSYDKWMASVAALAAYQQEDMSAAYVEF 180 K LFPIVE IR+ V + NYFDAAQLLKSDFLP++DKWMASV ALAA+QQEDM AA+ E Sbjct: 121 SKQLFPIVETIRQQVASNNYFDAAQLLKSDFLPAHDKWMASVGALAAFQQEDMKAAHAEA 180 Query: 181 QNSYHSGRIGMIVIGLVTLLLGAFFTWSITRTITAPL 217 ++SY +IGM+++G++TL LG FFT+ ITR+I PL Sbjct: 181 KDSYRKAQIGMLLMGVLTLGLGFFFTFVITRSIVGPL 217 >B3EAL3.1 B3EAL3_GEOLS Methyl-accepting chemotaxis sensory transducer Length = 868 Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 109/217 (50%) Query: 1 MISNIKIGARLALGFCLVLLCAAAILLNGLWRMTQMESSSAYIIDQKVASMTAAMSMRES 60 M+ N+KIG RLA+GF VL+ I + +T +++ +I+ K+ + +R S Sbjct: 1 MLKNMKIGKRLAVGFAAVLILLTIIAVVSYVNVTSLDNEMDSLIEDKIVKIDLLTDIRIS 60 Query: 61 GSALALALRKVVTPTDAAEGQQENQRLAKILQAYAGYEGQLTKLTSTDKGKALLTASAAE 120 + A A+R ++ ++ AE Q+E R+ + + K+ TD G+ L+ A + Sbjct: 61 ANVSARAIRNMLLVSEPAERQKELARVKEAGEKITKGIEDFEKMIKTDSGRKLMAAVKDK 120 Query: 121 RKVLFPIVEKIREMVGAGNYFDAAQLLKSDFLPSYDKWMASVAALAAYQQEDMSAAYVEF 180 R + +++ ++ +G +A QLL S S ++ ++ YQ++ + + + Sbjct: 121 RAAMQADQKQVIDLSQSGKRDEAIQLLTSKLRQSQAEYFKAIGEFMDYQKKLVKESGKKG 180 Query: 181 QNSYHSGRIGMIVIGLVTLLLGAFFTWSITRTITAPL 217 + + ++V+G+ +L++G F W IT++I P+ Sbjct: 181 IALANQTKTIVLVLGIASLIIGIFMGWFITKSIVTPI 217 >D2UEN8.1 D2UEN8_XANAP Putative methyl-accepting chemotaxis protein Length = 737 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 8/216 (3%) Query: 6 KIGARLALGFCLVLLCAAAILLNGLWRMTQMESSSAYIIDQKVASMTAAMSMRESGSALA 65 +G RLA F +++L + +++ GL + Q I+++ +A+M A+ M + S +A Sbjct: 9 NVGVRLATAFGILILLSCTLVVAGLITLFQARGRLDSIVNRNIAAMRASSEMLNASSVVA 68 Query: 66 LALRKVVTPTDAAEGQQENQRLAKILQA----YAGYEGQLTKLTSTDKGKALLTASAAER 121 + +R +V PT Q++N R +K++ Y ++++++S +G A R Sbjct: 69 INIRNIVLPT----SQEDNIRFSKVIDQQRARYLAARKRMSEISSDAQGLAKAEEIDRMR 124 Query: 122 KVLFPIVEKIREMVGAGNYFDAAQLLKSDFLPSYDKWMASVAALAAYQQEDMSAAYVEFQ 181 + + ++ ++ +A L+ + P KW S+A A Q + S AY E Sbjct: 125 AMSVEVNNRVIDLGMHDKPKEALDLMMAKAAPLTQKWQESIAVYADLQAKRSSDAYAEAS 184 Query: 182 NSYHSGRIGMIVIGLVTLLLGAFFTWSITRTITAPL 217 S GR +IV G + +L+ + W ITR++T PL Sbjct: 185 ESMDRGRNLLIVGGALVVLVSSLLAWLITRSLTVPL 220 >D2UEN9.1 D2UEN9_XANAP Putative methyl-accepting chemotaxis protein Length = 738 Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 12/218 (5%) Query: 6 KIGARLALGFCLVLLCAAAILLNGLWRMTQMESSSAYIIDQKVASMTAAMSMRESGSALA 65 +G RL+ F +++L + +++ GL + Q I+++ +A++ A+ M +S SA+A Sbjct: 9 NVGTRLSTAFGILILLSCTLVVAGLITLIQARGRLDSIVNRNIAAIRASSEMLDSSSAVA 68 Query: 66 LALRKVVTPTDAAEGQQENQRLAK-ILQAYAGY---EGQLTKLTSTDKGKALLTASAAER 121 + +R +V PT Q++N R +K I+Q A Y +L+++ S + +A L R Sbjct: 69 INIRNIVLPT----SQEDNIRFSKVIVQQRARYLAARKRLSEIPSDAQSRAKLEEIDRTR 124 Query: 122 KVLFPIVEKIREMVGAGNYFDAA--QLLKSDFLPSYDKWMASVAALAAYQQEDMSAAYVE 179 + + ++ ++ NY A L+ + +P KW ++AA A Q + S AY Sbjct: 125 AMSVEVNNRVIDL--GMNYKPEAALDLMMAKSVPVVQKWQDAIAAYADLQAKLSSDAYAS 182 Query: 180 FQNSYHSGRIGMIVIGLVTLLLGAFFTWSITRTITAPL 217 S GR +I G + +L+ + W ITR++T PL Sbjct: 183 ASESMDRGRNLLIAGGALVVLVSSLLAWLITRSLTMPL 220 >F0C243.1 F0C243_9XANT Methyl-accepting chemotaxis protein Length = 752 Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 8/216 (3%) Query: 6 KIGARLALGFCLVLLCAAAILLNGLWRMTQMESSSAYIIDQKVASMTAAMSMRESGSALA 65 +G RL+L F +++L + A++ GL+ ++Q I+++ +A + A M ++ + ++ Sbjct: 9 NVGKRLSLAFGVLILLSCALVAAGLYTLSQARERLDTIVNRNMAMIQYATDMLDANATIS 68 Query: 66 LALRKVVTPTDAAEGQQENQRLAKILQA----YAGYEGQLTKLTSTDKGKALLTASAAER 121 L LR +V PT ++NQ+ A ++ A Y +L + + L A + R Sbjct: 69 LNLRNIVLPTTT----EQNQQFAAVIDAQRIRYKELRDKLYAFPADAHDQELRNALDSTR 124 Query: 122 KVLFPIVEKIREMVGAGNYFDAAQLLKSDFLPSYDKWMASVAALAAYQQEDMSAAYVEFQ 181 + +++RE+ AG A +L P+ +W ++ + Q++ AY + Sbjct: 125 EQALAHNQQVRELGMAGKADQAMPILLERAAPATQRWQDAIRTYSDAQRKSSQLAYDQAS 184 Query: 182 NSYHSGRIGMIVIGLVTLLLGAFFTWSITRTITAPL 217 S GR +I G+ +LL A W ITR++T PL Sbjct: 185 ASMARGRSMLISGGVAVVLLSALLAWMITRSLTGPL 220