BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0146.p         (51 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8INV6.1 D8INV6_HERSS Phosphate regulon two-component response r...    90   1e-16
F1VXX9.1 F1VXX9_9BURK Phosphate regulon transcriptional regulato...    77   9e-13

>D8INV6.1 D8INV6_HERSS Phosphate regulon two-component response regulator
          transcription regulator protein
          Length = 245

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/47 (91%), Positives = 44/47 (93%)

Query: 1  MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSNTAAAWEFVQRRAPH 47
          MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSN AAAW+FVQ RAP 
Sbjct: 21 MTTILIVEDEPSIAELIAFTLKEAGWSSFVVSNAAAAWDFVQHRAPQ 67


>F1VXX9.1 F1VXX9_9BURK Phosphate regulon transcriptional regulatory protein
          PhoB
          Length = 229

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 40/46 (86%)

Query: 2  TTILIVEDEPSIAELIAFTLKEAGWSSFVVSNTAAAWEFVQRRAPH 47
          TTILIVEDEPSI EL+++TL+EAGW++  V+ TA AWEF+QRR PH
Sbjct: 6  TTILIVEDEPSIVELVSYTLREAGWNTMAVNTTAEAWEFIQRRTPH 51