BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0145.p         (162 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8INV6.1 D8INV6_HERSS Phosphate regulon two-component response r...   289   8e-77
A6T0C9.1 A6T0C9_JANMA Phosphate regulon two-component response r...   270   5e-71
A4G454.1 A4G454_HERAR Phosphate regulon transcriptional regulato...   269   1e-70
F1VXX9.1 F1VXX9_9BURK Phosphate regulon transcriptional regulato...   268   2e-70
C3X477.1 C3X477_OXAFO Response regulator                              219   9e-56

>D8INV6.1 D8INV6_HERSS Phosphate regulon two-component response regulator
           transcription regulator protein
          Length = 245

 Score =  289 bits (740), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 142/157 (90%), Positives = 148/157 (94%)

Query: 6   APRAAXQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEFAQ 65
           A R   QLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPE AQ
Sbjct: 89  ADRQLQQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEHAQ 148

Query: 66  EEMTVGPVTLDPASCSVALSGDKIDIGHAEYKLLKFFMAHPDRVFSRSQLLDRVWGDHVV 125
           E M+ GP+TLDPASCSV+LSG +IDIGHAEYKLLKFF+AHPDRVFSRSQLLDRVWGDHVV
Sbjct: 149 EVMSAGPITLDPASCSVSLSGARIDIGHAEYKLLKFFLAHPDRVFSRSQLLDRVWGDHVV 208

Query: 126 IEERTVDVHVLRLRKALRDAEHLIKTVRSVGYMLSAK 162
           IEERTVDVHVLRLRKALRDAE+LIKTVRSVGYMLS K
Sbjct: 209 IEERTVDVHVLRLRKALRDAEYLIKTVRSVGYMLSTK 245


>A6T0C9.1 A6T0C9_JANMA Phosphate regulon two-component response regulator
          Length = 229

 Score =  270 bits (690), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 128/157 (81%), Positives = 143/157 (91%)

Query: 6   APRAAXQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEFAQ 65
           A R   +L +IMLTAKSMEEDKIAGLDNGADDY+TKPFSPRELTARI ALLRRK+PE +Q
Sbjct: 73  ADRQFNELPIIMLTAKSMEEDKIAGLDNGADDYVTKPFSPRELTARINALLRRKTPEHSQ 132

Query: 66  EEMTVGPVTLDPASCSVALSGDKIDIGHAEYKLLKFFMAHPDRVFSRSQLLDRVWGDHVV 125
             MT G ++LDP SCSV+++ +KIDIGHAE+KLLKFF+AHPDRVFSRSQLLD+VWGDHVV
Sbjct: 133 TLMTAGNISLDPVSCSVSMNDEKIDIGHAEFKLLKFFLAHPDRVFSRSQLLDKVWGDHVV 192

Query: 126 IEERTVDVHVLRLRKALRDAEHLIKTVRSVGYMLSAK 162
           IEERTVDVHVLRLRKAL+DAEHLIKTVRSVGYMLS K
Sbjct: 193 IEERTVDVHVLRLRKALKDAEHLIKTVRSVGYMLSTK 229


>A4G454.1 A4G454_HERAR Phosphate regulon transcriptional regulatory protein
           PhoB
          Length = 229

 Score =  269 bits (687), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/157 (81%), Positives = 143/157 (91%)

Query: 6   APRAAXQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEFAQ 65
           A R   +L +IMLTAKSMEEDKIAGLDNGADDY+TKPFSPRELTARI ALLRRK+PE AQ
Sbjct: 73  ADRQFNELPIIMLTAKSMEEDKIAGLDNGADDYVTKPFSPRELTARINALLRRKTPEHAQ 132

Query: 66  EEMTVGPVTLDPASCSVALSGDKIDIGHAEYKLLKFFMAHPDRVFSRSQLLDRVWGDHVV 125
             MT G ++LDP SCSV+++ +KIDIGHAE+KLLKFF+AHPDRVFSRSQLLD+VWGDHVV
Sbjct: 133 TLMTAGSISLDPISCSVSMNDEKIDIGHAEFKLLKFFLAHPDRVFSRSQLLDKVWGDHVV 192

Query: 126 IEERTVDVHVLRLRKALRDAEHLIKTVRSVGYMLSAK 162
           IEERTVDVHVLRLRKAL++AEHLIKTVRSVGYMLS K
Sbjct: 193 IEERTVDVHVLRLRKALKEAEHLIKTVRSVGYMLSEK 229


>F1VXX9.1 F1VXX9_9BURK Phosphate regulon transcriptional regulatory protein
           PhoB
          Length = 229

 Score =  268 bits (685), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/157 (82%), Positives = 141/157 (89%)

Query: 6   APRAAXQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEFAQ 65
           A R    + VIMLTAK+MEEDKIAGLDNGADDY+TKPFSPRELTARIKALLRRKSPE AQ
Sbjct: 73  ADRQLQAIPVIMLTAKTMEEDKIAGLDNGADDYVTKPFSPRELTARIKALLRRKSPEHAQ 132

Query: 66  EEMTVGPVTLDPASCSVALSGDKIDIGHAEYKLLKFFMAHPDRVFSRSQLLDRVWGDHVV 125
             M  GPVTLDP SCSV+LS  KI+IGHAE+KLLKFF+AHPDRVFSR+QLLD+VWGDH V
Sbjct: 133 SMMRAGPVTLDPISCSVSLSDQKIEIGHAEFKLLKFFLAHPDRVFSRTQLLDKVWGDHAV 192

Query: 126 IEERTVDVHVLRLRKALRDAEHLIKTVRSVGYMLSAK 162
           IEERTVDVHVLRLRKAL++AEHLI+TVRSVGYMLS K
Sbjct: 193 IEERTVDVHVLRLRKALKEAEHLIRTVRSVGYMLSEK 229


>C3X477.1 C3X477_OXAFO Response regulator
          Length = 233

 Score =  219 bits (559), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 103/155 (66%), Positives = 126/155 (81%)

Query: 8   RAAXQLSVIMLTAKSMEEDKIAGLDNGADDYITKPFSPRELTARIKALLRRKSPEFAQEE 67
           R    L VIMLTAK++EEDK+AGLD GADDYITKPFSP+EL ARI ALLRRK+PE A+  
Sbjct: 75  REMKTLPVIMLTAKTLEEDKVAGLDQGADDYITKPFSPKELVARINALLRRKAPERAKSL 134

Query: 68  MTVGPVTLDPASCSVALSGDKIDIGHAEYKLLKFFMAHPDRVFSRSQLLDRVWGDHVVIE 127
           +  G VTLDP SC V +   +I++GH+E++LLKF MA+PDRVFSR QLLD+VW + + IE
Sbjct: 135 LRAGAVTLDPESCQVKIGNGEIEMGHSEFRLLKFLMANPDRVFSRGQLLDKVWSNQLDIE 194

Query: 128 ERTVDVHVLRLRKALRDAEHLIKTVRSVGYMLSAK 162
           ERTVDVH+LRLRKAL+  E+LI+TVR +GYMLS K
Sbjct: 195 ERTVDVHILRLRKALKGQENLIRTVRGMGYMLSEK 229