BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0134.p         (246 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E1TKE8.1 E1TKE8_BURSG Two component transcriptional regulator, w...   432   e-119
D5WLN8.1 D5WLN8_BURSC Two component transcriptional regulator, w...   430   e-119
E8YU28.1 E8YU28_9BURK Two component transcriptional regulator, w...   429   e-118
B5WJG9.1 B5WJG9_9BURK Two component transcriptional regulator, w...   429   e-118
A9AMJ0.1 A9AMJ0_BURM1 Two component transcriptional regulator, w...   428   e-118

>E1TKE8.1 E1TKE8_BURSG Two component transcriptional regulator, winged helix
           family
          Length = 246

 Score =  432 bits (1111), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/246 (86%), Positives = 229/246 (93%)

Query: 1   MENQDHILIVDDDRGIRELLAAYLEKNGMRVSLAANGRQMRAVLEQGAPDLIVLDLMLPG 60
           M+  DH+LIVDDDRGIREL+A YLEKNGMRVSLAANGRQMRA LEQG PDLIVLDLM+PG
Sbjct: 1   MDTIDHVLIVDDDRGIRELIAGYLEKNGMRVSLAANGRQMRAALEQGTPDLIVLDLMMPG 60

Query: 61  EDGLVLCRELRVGKFKAVPVLMLTARSEETDRIVGLEMGADDYLTKPFAVRELMARIRSV 120
           EDGLVLCRELR GKF+ VPVLMLTAR+EE DRI+GLEMGADDYL KPFAVREL+ARIR+V
Sbjct: 61  EDGLVLCRELRAGKFRTVPVLMLTARNEEADRILGLEMGADDYLPKPFAVRELLARIRAV 120

Query: 121 LRRARMLPPNMQVTEAVQMLGFGDWRLDTTARHLLDRDGTMVALSGAEYRLLRVFLDHPQ 180
           LRRARMLPP MQVTE+ QMLGFGDWRLDTTARHLLD +GTMVALSGAEYRLLRVFLDHPQ
Sbjct: 121 LRRARMLPPGMQVTESAQMLGFGDWRLDTTARHLLDPEGTMVALSGAEYRLLRVFLDHPQ 180

Query: 181 RVLTRDQLLNLTQGRASDPFDRSIDLLVSRLRQRLLDGAREPRYIKTLRNEGYVFSAAVT 240
           RVLTRDQLLNLTQGR SDPFDRSIDL+VSRLRQRL D AREPRYIKTLR+EGYVFSAAV 
Sbjct: 181 RVLTRDQLLNLTQGRQSDPFDRSIDLMVSRLRQRLRDVAREPRYIKTLRSEGYVFSAAVQ 240

Query: 241 LIEGEQ 246
           +IE +Q
Sbjct: 241 VIEDQQ 246


>D5WLN8.1 D5WLN8_BURSC Two component transcriptional regulator, winged helix
           family
          Length = 246

 Score =  430 bits (1106), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/246 (87%), Positives = 225/246 (91%)

Query: 1   MENQDHILIVDDDRGIRELLAAYLEKNGMRVSLAANGRQMRAVLEQGAPDLIVLDLMLPG 60
           ME  DH+LIVDDDRGIRELLA YLEKNG+RVSLAANGRQMRA LE GAPDLIVLDLMLPG
Sbjct: 1   METSDHVLIVDDDRGIRELLAGYLEKNGVRVSLAANGRQMRATLENGAPDLIVLDLMLPG 60

Query: 61  EDGLVLCRELRVGKFKAVPVLMLTARSEETDRIVGLEMGADDYLTKPFAVRELMARIRSV 120
           EDGLVLCRELR GKF+AVP+LMLTARSEE DRIVGLEMGADDYLTKPFA REL+ARIRSV
Sbjct: 61  EDGLVLCRELRAGKFRAVPILMLTARSEEADRIVGLEMGADDYLTKPFAARELLARIRSV 120

Query: 121 LRRARMLPPNMQVTEAVQMLGFGDWRLDTTARHLLDRDGTMVALSGAEYRLLRVFLDHPQ 180
           LRRARMLPP M+VTE+  ML FGDWRLDTTARHLLD DGT VALSGAEYRLLRVFLDHPQ
Sbjct: 121 LRRARMLPPGMEVTESAPMLCFGDWRLDTTARHLLDADGTEVALSGAEYRLLRVFLDHPQ 180

Query: 181 RVLTRDQLLNLTQGRASDPFDRSIDLLVSRLRQRLLDGAREPRYIKTLRNEGYVFSAAVT 240
           RVLTRDQLLNLTQGR +DPFDRSIDL+VSRLRQRL DGAREPRYIKTLR+EGYVFSA VT
Sbjct: 181 RVLTRDQLLNLTQGRQADPFDRSIDLMVSRLRQRLRDGAREPRYIKTLRSEGYVFSAVVT 240

Query: 241 LIEGEQ 246
            I   Q
Sbjct: 241 AIGDPQ 246


>E8YU28.1 E8YU28_9BURK Two component transcriptional regulator, winged helix
           family
          Length = 246

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/245 (86%), Positives = 228/245 (93%)

Query: 1   MENQDHILIVDDDRGIRELLAAYLEKNGMRVSLAANGRQMRAVLEQGAPDLIVLDLMLPG 60
           M+  DH+LIVDDDRGIREL+A YLEKNGMRVSLAANGRQMRA LEQGAPDLIVLDLM+PG
Sbjct: 1   MDTTDHVLIVDDDRGIRELIAGYLEKNGMRVSLAANGRQMRAALEQGAPDLIVLDLMMPG 60

Query: 61  EDGLVLCRELRVGKFKAVPVLMLTARSEETDRIVGLEMGADDYLTKPFAVRELMARIRSV 120
           EDGLVLCRELR GKF+ VPVLMLTAR+EE DRI+GLEMGADDYL KPFAVREL+ARIR+V
Sbjct: 61  EDGLVLCRELRAGKFRTVPVLMLTARNEEADRILGLEMGADDYLPKPFAVRELLARIRAV 120

Query: 121 LRRARMLPPNMQVTEAVQMLGFGDWRLDTTARHLLDRDGTMVALSGAEYRLLRVFLDHPQ 180
           LRRARMLPP MQVTE+ QMLGFGDWRLDTTARHLLD +GTMVALSGAEYRLLRVFLDHPQ
Sbjct: 121 LRRARMLPPGMQVTESAQMLGFGDWRLDTTARHLLDSEGTMVALSGAEYRLLRVFLDHPQ 180

Query: 181 RVLTRDQLLNLTQGRASDPFDRSIDLLVSRLRQRLLDGAREPRYIKTLRNEGYVFSAAVT 240
           RVLTRDQLLNLTQGR +D FDRSIDL+VSRLRQRL D AREPRYIKTLR+EGYVFSAAV 
Sbjct: 181 RVLTRDQLLNLTQGRQADAFDRSIDLMVSRLRQRLRDEAREPRYIKTLRSEGYVFSAAVN 240

Query: 241 LIEGE 245
           +IE +
Sbjct: 241 VIEDQ 245


>B5WJG9.1 B5WJG9_9BURK Two component transcriptional regulator, winged helix
           family
          Length = 246

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/246 (86%), Positives = 225/246 (91%)

Query: 1   MENQDHILIVDDDRGIRELLAAYLEKNGMRVSLAANGRQMRAVLEQGAPDLIVLDLMLPG 60
           ME  DH+LIVDDDRGIRELLA YLEKNG+RVSLAANGRQMRA LE GAPDLIVLDLMLPG
Sbjct: 1   METSDHVLIVDDDRGIRELLAGYLEKNGVRVSLAANGRQMRAALENGAPDLIVLDLMLPG 60

Query: 61  EDGLVLCRELRVGKFKAVPVLMLTARSEETDRIVGLEMGADDYLTKPFAVRELMARIRSV 120
           EDGLVLCRELR GKF+ VP+LMLTAR+EE DRIVGLEMGADDYLTKPFA REL+ARIRSV
Sbjct: 61  EDGLVLCRELRAGKFRTVPILMLTARNEEADRIVGLEMGADDYLTKPFAARELLARIRSV 120

Query: 121 LRRARMLPPNMQVTEAVQMLGFGDWRLDTTARHLLDRDGTMVALSGAEYRLLRVFLDHPQ 180
           LRRARMLPP M+VTE+  ML FGDWRLDTTARHLLD DGTMVALSGAEYRLLRVFLDHPQ
Sbjct: 121 LRRARMLPPGMEVTESAPMLCFGDWRLDTTARHLLDADGTMVALSGAEYRLLRVFLDHPQ 180

Query: 181 RVLTRDQLLNLTQGRASDPFDRSIDLLVSRLRQRLLDGAREPRYIKTLRNEGYVFSAAVT 240
           RVLTRDQLLNLTQGR +DPFDRSIDL+VSRLRQRL DGAREPRYIKTLR+EGYVFSA VT
Sbjct: 181 RVLTRDQLLNLTQGRQADPFDRSIDLMVSRLRQRLRDGAREPRYIKTLRSEGYVFSATVT 240

Query: 241 LIEGEQ 246
            +   Q
Sbjct: 241 AMGDPQ 246


>A9AMJ0.1 A9AMJ0_BURM1 Two component transcriptional regulator, winged helix
           family
          Length = 246

 Score =  428 bits (1100), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/244 (86%), Positives = 225/244 (92%)

Query: 1   MENQDHILIVDDDRGIRELLAAYLEKNGMRVSLAANGRQMRAVLEQGAPDLIVLDLMLPG 60
           M+  DH+LIVDDDR IREL+A YLEKNGMRVSLAANGR+MR+VL+ GAPDLIVLDLMLPG
Sbjct: 1   MDKPDHVLIVDDDRAIRELIADYLEKNGMRVSLAANGREMRSVLDDGAPDLIVLDLMLPG 60

Query: 61  EDGLVLCRELRVGKFKAVPVLMLTARSEETDRIVGLEMGADDYLTKPFAVRELMARIRSV 120
           EDGL LCR+LR GKF+ VPVLMLTARSEETDRIVGLEMGADDYL KPFAVREL+ARIRSV
Sbjct: 61  EDGLTLCRDLRAGKFRTVPVLMLTARSEETDRIVGLEMGADDYLAKPFAVRELLARIRSV 120

Query: 121 LRRARMLPPNMQVTEAVQMLGFGDWRLDTTARHLLDRDGTMVALSGAEYRLLRVFLDHPQ 180
           LRRARMLPP MQVTE   ML FG+WRLDTT RHLLD +GT+VALSGAEYRLLRVFLDHPQ
Sbjct: 121 LRRARMLPPGMQVTETAGMLAFGEWRLDTTGRHLLDAEGTLVALSGAEYRLLRVFLDHPQ 180

Query: 181 RVLTRDQLLNLTQGRASDPFDRSIDLLVSRLRQRLLDGAREPRYIKTLRNEGYVFSAAVT 240
           RVLTRDQLLNLTQGR SDPFDRSIDLLVSRLRQRL DGAREPRYIKTLRNEGYVFS+AVT
Sbjct: 181 RVLTRDQLLNLTQGRQSDPFDRSIDLLVSRLRQRLRDGAREPRYIKTLRNEGYVFSSAVT 240

Query: 241 LIEG 244
            IEG
Sbjct: 241 AIEG 244