BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0083.p (263 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B7RZ04.1 B7RZ04_9GAMM Putative NAD-binding domain 4 protein 257 1e-66 A1B804.1 A1B804_PARDP Short-chain dehydrogenase/reductase SDR 237 1e-60 B3T0Y3.1 B3T0Y3_9ZZZZ Putative short chain dehydrogenase 234 1e-59 Q1M9H1.1 Q1M9H1_RHIL3 Putative short-chain dehydrogenase 231 5e-59 A3U0A6.1 A3U0A6_9RHOB Short chain dehydrogenase 231 1e-58 >B7RZ04.1 B7RZ04_9GAMM Putative NAD-binding domain 4 protein Length = 250 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 133/249 (53%), Positives = 175/249 (70%), Gaps = 9/249 (3%) Query: 14 FRMDGRTALITGASKGLGEAMAEALAEQGAKVVLVARTTSELETVAARIRSQGGQAEVRT 73 FR+D + AL+TGA KG+G A A+ LA+ GA V+ VART ++LET+A+ + G E Sbjct: 10 FRLDKKRALVTGAGKGIGRACAQRLAKSGANVIAVARTEADLETLAS---AHPGLIEPWV 66 Query: 74 CDVTDRKAIRAVIASLEELDILINNAGSNIPEPIDVVTDEHLDYLQDLNTTAYFVVAQAA 133 DVTD K ++ I SLE LDIL+NN G+N P+P V E LD + +LN + F+VAQAA Sbjct: 67 ADVTDEKFLQR-IESLERLDILVNNVGTNKPQPFTEVERETLDLILNLNVRSAFLVAQAA 125 Query: 134 VKKMKEHPDRKNRGASIINIASQMGHIGSESRTVYCMTKHAVVGLTRAMAVELAATGIRV 193 + M K SIIN+ SQMGH+G+++RTVYCMTKHA+ GLT+AMAVELA IRV Sbjct: 126 ARVMV-----KQGSGSIINMGSQMGHVGAKNRTVYCMTKHAIEGLTKAMAVELAVLDIRV 180 Query: 194 NSIGPTFIDTPLVRRVVDTPEKYNTLVSRIPMGHMGQVQDIAAAAVYLASSASGMVTGAG 253 NS+ PTFI+TPL + + + E + ++SRIPMGH+GQV D+A A ++LAS A+ MVTG Sbjct: 181 NSVAPTFIETPLTKPMFEKAEFHQDVISRIPMGHIGQVDDVANAVLFLASPAANMVTGDS 240 Query: 254 LLVDGGWTA 262 L VDGGWTA Sbjct: 241 LKVDGGWTA 249 >A1B804.1 A1B804_PARDP Short-chain dehydrogenase/reductase SDR Length = 252 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 120/250 (48%), Positives = 164/250 (65%), Gaps = 4/250 (1%) Query: 14 FRMDGRTALITGASKGLGEAMAEALAEQGAKVVLVARTTSELETVAARIRSQGGQAEVRT 73 F + GR AL+TGA +G+G A+AE A+ GA+VVL AR+ +E+ VA + QG +A Sbjct: 7 FSLKGRVALVTGAGRGIGRAIAEVYAQAGAEVVLCARSRTEIAEVAQALVEQGFKARAIP 66 Query: 74 CDVTDRKAIRAVIASLEELDILINNAGSNIPEPIDVVTDEHLDYLQDLNTTAYFVVAQAA 133 CDVTD RA+ LE LDI +NNAG+N P P+ VT+E D + LN A F Q+ Sbjct: 67 CDVTDVADFRALADGLERLDIFVNNAGTNRPRPLVDVTEEDFDVIAGLNLRAAFFALQSV 126 Query: 134 VKKMKEHPDRKNRGASIINIASQMGHIGSESRTVYCMTKHAVVGLTRAMAVELAATGIRV 193 ++M++ RG SIIN++SQMGHIG+ R+VYC TK + GLT+A A+EL+ IRV Sbjct: 127 ARRMRDL----GRGGSIINMSSQMGHIGAADRSVYCATKWGIEGLTKASAIELSPFRIRV 182 Query: 194 NSIGPTFIDTPLVRRVVDTPEKYNTLVSRIPMGHMGQVQDIAAAAVYLASSASGMVTGAG 253 N+I PTFI+TPL R D P + I +G +GQV DI AA+YLAS AS ++TG+ Sbjct: 183 NTICPTFIETPLTRPYFDDPAFREHCLRMIKLGRVGQVGDIVGAALYLASDASALMTGSA 242 Query: 254 LLVDGGWTAQ 263 +++DGGWTA+ Sbjct: 243 VILDGGWTAE 252 >B3T0Y3.1 B3T0Y3_9ZZZZ Putative short chain dehydrogenase Length = 255 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 112/250 (44%), Positives = 167/250 (66%) Query: 13 RFRMDGRTALITGASKGLGEAMAEALAEQGAKVVLVARTTSELETVAARIRSQGGQAEVR 72 + + +TAL+TGA KG+G A A ALAE GA +++++RT +L V+ I+ + Sbjct: 5 KINLKNKTALVTGAGKGIGSACAIALAEAGADLIIISRTQKDLNNVSKIIKKLKSKCSTF 64 Query: 73 TCDVTDRKAIRAVIASLEELDILINNAGSNIPEPIDVVTDEHLDYLQDLNTTAYFVVAQA 132 CDVT+ I+ +I+ +++DIL+NNAG+NIPE V ++++YL LNT A F +AQ Sbjct: 65 ICDVTNYTQIKNIISKQKKIDILVNNAGTNIPEHFTKVQKKNMEYLVKLNTIATFHLAQL 124 Query: 133 AVKKMKEHPDRKNRGASIINIASQMGHIGSESRTVYCMTKHAVVGLTRAMAVELAATGIR 192 KM E +RK G SIINI+SQMGH+G +R+VY MTK + GLT+ MA++LA IR Sbjct: 125 CTLKMLETKNRKKIGGSIINISSQMGHVGGPNRSVYNMTKFGLEGLTKGMAIDLAKNNIR 184 Query: 193 VNSIGPTFIDTPLVRRVVDTPEKYNTLVSRIPMGHMGQVQDIAAAAVYLASSASGMVTGA 252 VN++ PTF+DTP+ ++ ++++IP+G + +V D+A A +LAS+AS M+TG Sbjct: 185 VNTVCPTFVDTPMTKKFFKNKNFKREVLNKIPLGRVAEVSDVATAVAFLASNASSMITGT 244 Query: 253 GLLVDGGWTA 262 +LVDGGWTA Sbjct: 245 SILVDGGWTA 254 >Q1M9H1.1 Q1M9H1_RHIL3 Putative short-chain dehydrogenase Length = 255 Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 119/256 (46%), Positives = 164/256 (64%), Gaps = 8/256 (3%) Query: 10 IAHRFRMDGRTALITGASKGLGEAMAEALAEQGAKVVLVARTTSELETVAARIRSQGGQA 69 I RF + GR AL+TGA +GLG ++AE LA GA+V L ART SE+E A IR G +A Sbjct: 6 ILERFSLSGRRALVTGAGRGLGRSIAEGLASAGAEVTLCARTESEVEEGARCIRDHGFKA 65 Query: 70 EVRTCDVTDRKAIRAVIASLEELDILINNAGSNIPEPIDVVTDEHLDYLQDLNTTAYFVV 129 E DV+D RA + ++ DI +NNAG+N P+P+ VT E D + LN A Sbjct: 66 EALVADVSDIAGFRATVDAMHAHDIFVNNAGTNRPKPLSDVTIEDFDAVIGLNLRAAVFA 125 Query: 130 AQAAVKKMKEHPDRKNRG--ASIINIASQMGHIGSESRTVYCMTKHAVVGLTRAMAVELA 187 AQA +M N G S+IN++SQMGH+G+ +RT+YC +K A+ G T+A+AVEL Sbjct: 126 AQAVTARMA------NLGIQGSVINMSSQMGHVGAANRTIYCASKWALEGFTKALAVELG 179 Query: 188 ATGIRVNSIGPTFIDTPLVRRVVDTPEKYNTLVSRIPMGHMGQVQDIAAAAVYLASSASG 247 GIRVN++ PTFI+TP+ ++ P N +VS+I +G +G +D+ A ++LAS AS Sbjct: 180 PVGIRVNTVAPTFIETPMTTPFLEDPAARNAIVSKIKLGRLGTPEDVVGAVLFLASDASA 239 Query: 248 MVTGAGLLVDGGWTAQ 263 +VTG+ LLVDGGWTA Sbjct: 240 LVTGSALLVDGGWTAD 255 >A3U0A6.1 A3U0A6_9RHOB Short chain dehydrogenase Length = 252 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 116/250 (46%), Positives = 165/250 (66%), Gaps = 4/250 (1%) Query: 14 FRMDGRTALITGASKGLGEAMAEALAEQGAKVVLVARTTSELETVAARIRSQGGQAEVRT 73 FR+DGR AL+TGA +G+G A+A A GA+V L AR+ EL ++ IR+ GG +V Sbjct: 7 FRLDGRRALVTGAGRGIGRAIALGYAAAGAEVTLCARSQEELNALSEEIRASGGTCDVMP 66 Query: 74 CDVTDRKAIRAVIASLEELDILINNAGSNIPEPIDVVTDEHLDYLQDLNTTAYFVVAQAA 133 D+TD+ A+ A +A E IL+NNAG+N P+P+ V DE +D + DLN A ++ +A Sbjct: 67 LDITDQAAVTAALADREAYHILLNNAGTNRPKPLTEVVDEDIDAVLDLNVRATILMTRAV 126 Query: 134 VKKMKEHPDRKNRGASIINIASQMGHIGSESRTVYCMTKHAVVGLTRAMAVELAATGIRV 193 V +M E S+I ++SQMGH+G+ +RT+YC +K AV G TRA+AVEL GIRV Sbjct: 127 VSRMLEDA----VTGSVITMSSQMGHVGAANRTLYCASKWAVEGFTRALAVELGPQGIRV 182 Query: 194 NSIGPTFIDTPLVRRVVDTPEKYNTLVSRIPMGHMGQVQDIAAAAVYLASSASGMVTGAG 253 N+I PTFI+TPL + P ++S+I +G +GQ DI AAV+LAS AS ++TG+ Sbjct: 183 NTICPTFIETPLTAPFFEDPAFKEQVLSKIKLGRIGQPSDIVGAAVFLASDASALMTGSS 242 Query: 254 LLVDGGWTAQ 263 +++DGGWTA Sbjct: 243 VMLDGGWTAD 252