BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0029.p         (127 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1G367.1 B1G367_9BURK Transcriptional regulator, TetR family          175   2e-42
E8UXS1.1 E8UXS1_TERSS Regulatory protein TetR                         156   1e-36
F0C691.1 F0C691_9XANT Transcriptional regulator, tetR family          137   4e-31
D9WHD1.1 D9WHD1_9ACTO Putative TetR-family transcriptional regul...   135   2e-30
Q82Q52.1 Q82Q52_STRAW Putative TetR-family transcriptional regul...   131   3e-29

>B1G367.1 B1G367_9BURK Transcriptional regulator, TetR family
          Length = 191

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/140 (67%), Positives = 103/140 (73%), Gaps = 16/140 (11%)

Query: 1   VLRHFPTREALFDALLRTNLDALTQKASEFESSHPPDEALVSWFREGVAFVHSYSGVVAL 60
           VLRHFPTREALF+ALLR +LDALTQKA+E E+S PPDEA VSWFREGVAFVHSY+GVVAL
Sbjct: 43  VLRHFPTREALFEALLREHLDALTQKAAELEASSPPDEAFVSWFREGVAFVHSYNGVVAL 102

Query: 61  MARAHEDP-----------NSDGIDLFALXN-----WADMDGIDLFALMSALGWVGDQPS 104
           MA AH DP           +S G  L           ADM+GIDLFALMSALGWV DQPS
Sbjct: 103 MASAHADPESALYASCAAVHSAGERLLLRAQAEGTARADMNGIDLFALMSALGWVVDQPS 162

Query: 105 FAPRGDHLFHVITSAILTNR 124
           FAPR D+LF  I  A+LTNR
Sbjct: 163 FAPRADYLFDFIAGAMLTNR 182


>E8UXS1.1 E8UXS1_TERSS Regulatory protein TetR
          Length = 207

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 16/143 (11%)

Query: 1   VLRHFPTREALFDALLRTNLDALTQKASEFESSHPPDEALVSWFREGVAFVHSYSGVVAL 60
           +LRHFPTREAL++ALL TNLDALTQKA E E+++ PDEAL+SWFRE V F  SY GVV L
Sbjct: 54  LLRHFPTREALYEALLCTNLDALTQKAGELETANSPDEALLSWFREWVEFTQSYKGVVTL 113

Query: 61  MARAHEDPNSDGIDLFALXN----------------WADMDGIDLFALMSALGWVGDQPS 104
           MA AH +P+S      A  +                 ADM+G DLFALM+ALGW  DQPS
Sbjct: 114 MAAAHTNPDSALYASCAAIHSASARLLLRAQAEGTAHADMNGDDLFALMAALGWAVDQPS 173

Query: 105 FAPRGDHLFHVITSAILTNRPRE 127
           FAPR DHLFH+I +AILT+   E
Sbjct: 174 FAPRADHLFHIIANAILTSGSLE 196


>F0C691.1 F0C691_9XANT Transcriptional regulator, tetR family
          Length = 188

 Score =  137 bits (346), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/141 (55%), Positives = 92/141 (65%), Gaps = 16/141 (11%)

Query: 1   VLRHFPTREALFDALLRTNLDALTQKASEFESSHPPDEALVSWFREGVAFVHSYSGVVAL 60
           +LRHFPTREALF+ALL T+LDALTQ A   E+S  PD+AL SWFRE +AF   Y GVV L
Sbjct: 43  LLRHFPTREALFEALLCTHLDALTQTADALETSDSPDQALASWFREWMAFAQRYRGVVTL 102

Query: 61  MARAHEDPN-------------SDGIDLFALXNW---ADMDGIDLFALMSALGWVGDQPS 104
           MA AH +P+             S  + L A  N    ADM G DLF LM+ALGW+ D PS
Sbjct: 103 MASAHTNPDSALYASCAAVHAASARLLLRAQANGSARADMTGDDLFGLMAALGWLVDLPS 162

Query: 105 FAPRGDHLFHVITSAILTNRP 125
           FAPR  HL H++TSAIL + P
Sbjct: 163 FAPRAGHLSHLMTSAILKDWP 183


>D9WHD1.1 D9WHD1_9ACTO Putative TetR-family transcriptional regulator
          Length = 187

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/139 (52%), Positives = 86/139 (61%), Gaps = 16/139 (11%)

Query: 1   VLRHFPTREALFDALLRTNLDALTQKASEFESSHPPDEALVSWFREGVAFVHSYSGVVAL 60
           +LRHF TREALF+ALLRT+ D LT +A E E+S PPD+ALVSW R+ VA  H+Y GVVAL
Sbjct: 43  LLRHFSTREALFEALLRTSFDELTARAGEVETSSPPDDALVSWLRDFVACAHNYRGVVAL 102

Query: 61  MARAHEDPNS-----------DGIDLFALXN-----WADMDGIDLFALMSALGWVGDQPS 104
           M  A ED  S            G  L            D+DG DLFAL  +L W+ DQP+
Sbjct: 103 MVAAIEDAESALHTSCVTMRAAGTRLLVRAQAEGMARTDIDGTDLFALAGSLAWLSDQPA 162

Query: 105 FAPRGDHLFHVITSAILTN 123
            APR DHLF V+ SAILT 
Sbjct: 163 LAPRADHLFEVVASAILTK 181


>Q82Q52.1 Q82Q52_STRAW Putative TetR-family transcriptional regulator
          Length = 196

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/139 (52%), Positives = 84/139 (60%), Gaps = 16/139 (11%)

Query: 1   VLRHFPTREALFDALLRTNLDALTQKASEFESSHPPDEALVSWFREGVAFVHSYSGVVAL 60
           +LRHFPTREAL DALL T+ D LT KA   E+S  PD+ALVSW R+ VA+   Y G V L
Sbjct: 43  LLRHFPTREALLDALLHTSFDELTAKAGALETSSSPDDALVSWLRDCVAWTTEYRGAVVL 102

Query: 61  MARAHEDPNS-----------DGIDLFALXNWA-----DMDGIDLFALMSALGWVGDQPS 104
           MA A ED  S            G  L      A     D+DG DLFAL+ AL W+GDQPS
Sbjct: 103 MAAAIEDTESALHASCVTLRAAGARLLTRAQAAGMARTDIDGADLFALVEALAWLGDQPS 162

Query: 105 FAPRGDHLFHVITSAILTN 123
            APR DHLF V+  AILT+
Sbjct: 163 LAPRADHLFAVVAGAILTS 181