BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0024.p (481 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6SWR9.1 A6SWR9_JANMA Outer membrane protein 541 e-152 B9YZR2.1 B9YZR2_9NEIS RND efflux system, outer membrane lipoprot... 442 e-122 A1VRA6.1 A1VRA6_POLNA RND efflux system, outer membrane lipoprot... 440 e-121 A6T281.1 A6T281_JANMA Drug efflux lipoprotein 438 e-121 A5G784.1 A5G784_GEOUR RND efflux system, outer membrane lipoprot... 432 e-119 >A6SWR9.1 A6SWR9_JANMA Outer membrane protein Length = 476 Score = 541 bits (1395), Expect = e-152, Method: Compositional matrix adjust. Identities = 270/477 (56%), Positives = 363/477 (76%), Gaps = 11/477 (2%) Query: 7 SLRTIAGIS---LISASLAACSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASI 63 +LR + +S ++S+ L CSLAP Y++P PV+ W + E S A+ I Sbjct: 5 NLRVVVQLSYATVLSSILVGCSLAPVYERPDLPVSKTWPDQRLANE---RNSPDVTASEI 61 Query: 64 AWTDFFQDAQLKSVIAAALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQR 123 W +FF D L VI AL++NRDLR+A LNI+RARA+Y +Q AD++P++ + +GARQR Sbjct: 62 DWKEFFIDQNLSQVIQIALNNNRDLRVAALNIDRARALYGVQGADRLPSVGVGTSGARQR 121 Query: 124 LPADVNPTGKAGVNSSYFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLI 183 PAD+N G + V S+Y AG+G+ +FE+D FGR++NLS+AAL+RY+AT++A+RSAQI+LI Sbjct: 122 TPADLNDKGFSDVTSTYSAGIGITSFELDFFGRIKNLSQAALERYIATDEARRSAQIALI 181 Query: 184 AEVANTYEALVADRRLLQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKA 243 +EVA Y+AL AD RL QL NTL++R DS+ RQ+ L +GASSE DLRQ+ESL EAA+ Sbjct: 182 SEVAMRYQALAADHRLWQLANNTLSTRLDSHARQQSLLEQGASSELDLRQSESLLEAARV 241 Query: 244 ARAQQERRKTLDENALTVLVGHPLAADI---GTANATSAEQVLPDLPAGLPSDLLTARPD 300 A AQQ R++ +D+NAL +LVG + + G ++A A +L D+P GLPSDL++ RPD Sbjct: 242 ALAQQTRQRAVDQNALRLLVGATIDPSLLPSGMSDALPA--MLADIPVGLPSDLISTRPD 299 Query: 301 ILQQEAVLRSQNANIGAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPI 360 I Q EA+LRS+NA+IGAARAAFFPRISLTG+ G++SS+LSGLF++GSRSWSF+PQ+S+PI Sbjct: 300 IRQHEAILRSENASIGAARAAFFPRISLTGSLGTSSSELSGLFEAGSRSWSFLPQVSLPI 359 Query: 361 FEGGRNIANLNVAETDKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAES 420 F+ GRN ANLNVA+ D+ IA+A+YEK++Q+AFREVADALAG TL +E A AQE AE Sbjct: 360 FDVGRNRANLNVAKADRDIAIAEYEKSIQIAFREVADALAGTDTLKEELRASTAQERAER 419 Query: 421 ARYGFARSRYEAGYSSYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGGWK 477 RY ++ RYE+GY+SYLE+LDAQRSLFAIQQ++I +LAE+Q +I LYK LGGGWK Sbjct: 420 VRYVLSKQRYESGYASYLEFLDAQRSLFAIQQKTIVTELAEMQNKIGLYKALGGGWK 476 >B9YZR2.1 B9YZR2_9NEIS RND efflux system, outer membrane lipoprotein, NodT family Length = 488 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 233/453 (51%), Positives = 308/453 (67%) Query: 24 CSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASIAWTDFFQDAQLKSVIAAALD 83 CSLAP+YQ+PA PVA W + TQ+ AA I W +FF DA+L+ +I AL Sbjct: 18 CSLAPTYQRPAAPVAGQWPSGPAYGGDTATQATKGNAADIGWREFFADARLQKLIELALA 77 Query: 84 HNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPADVNPTGKAGVNSSYFAG 143 +NRDLR+A LN+E+ RA Y IQ AD P + G+G RQRLPAD++ +G+AGV+ Y A Sbjct: 78 NNRDLRVAMLNVEKTRAQYQIQRADLFPAIDATGSGTRQRLPADLSSSGRAGVSGKYSAS 137 Query: 144 VGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVANTYEALVADRRLLQLT 203 VG A+E+DLFGRV++L AL++Y A+ +AQ+SAQISL++EVA+ Y L A ++ Sbjct: 138 VGFTAYELDLFGRVQSLKNEALEQYFASGEAQKSAQISLVSEVASQYLTLRALDEQQKVV 197 Query: 204 ENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARAQQERRKTLDENALTVLV 263 +TL ++ SY+ K+ + G + DL A+S + AK+ A +++ ENAL +LV Sbjct: 198 TDTLTAQQSSYDLTKKRFDVGTVTALDLSTADSQVQTAKSNLASLMQQRAQAENALVLLV 257 Query: 264 GHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEAVLRSQNANIGAARAAFF 323 G PL AD+ NA A+ +L DLPAGLPSDLL RPDI Q E L++ NA+IGAARAAFF Sbjct: 258 GQPLPADLPQGNAFDAQGLLADLPAGLPSDLLERRPDIAQAEHQLKAANADIGAARAAFF 317 Query: 324 PRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRNIANLNVAETDKKIAVAQ 383 P ISLTG++G+ASS+LS LF G +WSFIPQI++PIF+ G+N A L+V+ T KKIAVAQ Sbjct: 318 PSISLTGSYGTASSELSNLFKGGQLAWSFIPQINLPIFDWGKNAAGLDVSTTGKKIAVAQ 377 Query: 384 YEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFARSRYEAGYSSYLEYLDA 443 YEK+VQ AFREV+DAL RA L + A +A +E+ RY A RY G S L LDA Sbjct: 378 YEKSVQSAFREVSDALTARAMLEQQIAAQEALVKSETQRYQLAELRYRNGVDSALTLLDA 437 Query: 444 QRSLFAIQQQSIQVQLAELQTRITLYKVLGGGW 476 QRSL++ QQ IQ +LA L ++TLYK LGGGW Sbjct: 438 QRSLYSAQQGLIQARLARLTNQVTLYKALGGGW 470 >A1VRA6.1 A1VRA6_POLNA RND efflux system, outer membrane lipoprotein, NodT family Length = 495 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 235/462 (50%), Positives = 312/462 (67%), Gaps = 15/462 (3%) Query: 24 CSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQ---AASIAWTDFFQDAQLKSVIAA 80 CS+ P+Y++PA PVAA W A +GT Q AA I W FF D +L+ +I A Sbjct: 24 CSMIPTYERPAAPVAADWPALSATAALSGTSGTANQGIAAADIEWQSFFSDPRLRQLIDA 83 Query: 81 ALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPADVNPTGKA-GVNSS 139 +L +NRDLR+A LNIE+ARA + I+ ADQ P + G+RQ P+ + S+ Sbjct: 84 SLRNNRDLRIAVLNIEQARAQFQIRRADQYPTVNAAATGSRQ-------PSSSGDSITST 136 Query: 140 YFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVANTYEALVADRRL 199 Y AG+ + ++E D FGRV +L EAAL +YLATE+ +++ QISL+A VANTY +L+AD L Sbjct: 137 YTAGLAMTSYEFDFFGRVASLKEAALAQYLATEEGRKTTQISLVAAVANTYLSLLADEEL 196 Query: 200 LQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARAQQERRKTLDENAL 259 + +T TLA+R DS+ K + G SSE D+RQAESL EAA+ + AQ R++ LD+NAL Sbjct: 197 IAITRQTLATREDSFRLSKLRFDNGVSSELDVRQAESLIEAARVSLAQLIRQRALDQNAL 256 Query: 260 TVLVGHP----LAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEAVLRSQNANI 315 +L+G P LA + + ++ D+PAGLPSDLLT RPD+ Q E +L + NANI Sbjct: 257 VLLLGQPATGELAVALPAGKGLADMPMMVDVPAGLPSDLLTRRPDVRQAEQLLLASNANI 316 Query: 316 GAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRNIANLNVAET 375 GAARAAFFP+ISLT + GSASS L LF SGS W+ PQ+ +PIF+ GRN A L+ A Sbjct: 317 GAARAAFFPKISLTASAGSASSHLGDLFKSGSFGWTLAPQLLLPIFDAGRNRAGLDSANA 376 Query: 376 DKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFARSRYEAGYS 435 + IAVAQYEK++Q AFREVADALAGRATL ++ A +AQ AE R+ + RY+ G + Sbjct: 377 GRDIAVAQYEKSIQTAFREVADALAGRATLGEQLRAQQAQANAEGVRFKLSDLRYQNGIA 436 Query: 436 SYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGGWK 477 S L+ LDAQRSLF QQ +Q +LA+LQ+++TLYKVLGGGWK Sbjct: 437 SQLDLLDAQRSLFTAQQAVVQTRLAQLQSQVTLYKVLGGGWK 478 >A6T281.1 A6T281_JANMA Drug efflux lipoprotein Length = 481 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 234/471 (49%), Positives = 318/471 (67%), Gaps = 13/471 (2%) Query: 8 LRTIAGISLISASLAACSLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASIAWTD 67 ++TI L + L+ACS+AP Y +P PVAA + P+ ++ +A I W + Sbjct: 1 MKTITLALLAAGVLSACSMAPKYVRPDAPVAADY------GVPSKADNNQVRAVDIGWRN 54 Query: 68 FFQDAQLKSVIAAALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPAD 127 FF D +L+ +I A+ +NRDLR+A L IE ARA+YNIQ AD +P L +N G+R R+PA Sbjct: 55 FFTDPRLQVLIGNAIANNRDLRVAALRIEEARALYNIQSADLLPTLNVNATGSRARVPAS 114 Query: 128 VNPTGKAGVNSSYFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEVA 187 ++ TG + V+S+Y G+GLAAFE+D FGRVR+LS+AAL YL+TE+AQR+AQISL++EVA Sbjct: 115 ISNTGSSVVSSNYQVGLGLAAFELDFFGRVRSLSDAALAAYLSTEEAQRAAQISLVSEVA 174 Query: 188 NTYEALVADRRLLQ---LTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAA 244 Y +++R + L T SR ++Y+ KQ + GASS DLR E+L + A+AA Sbjct: 175 KAY---LSERSFAEQQDLARQTYESRVEAYKLSKQRFEVGASSALDLRNDEALLQTARAA 231 Query: 245 RAQQERRKTLDENALTVLVGHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQ 304 +R++ NALT+LVG PL D+ A A S++ +L D+PAGLPSDLLT RPDI Sbjct: 232 ELLAQRQRAQAMNALTLLVGQPLT-DLPPAQALSSQTILTDIPAGLPSDLLTQRPDIRSA 290 Query: 305 EAVLRSQNANIGAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGG 364 E L S NANIGAARAAFFPRISLT G++S++L+GLF+ GSRSWSF PQ+ +PIF+ G Sbjct: 291 EQTLLSANANIGAARAAFFPRISLTAGLGTSSNELAGLFEGGSRSWSFAPQLVLPIFDAG 350 Query: 365 RNIANLNVAETDKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYG 424 RN NLN+AE K IAVA YEK++QVAFREV+DAL R L + A + + A++ R+ Sbjct: 351 RNRGNLNLAEVRKDIAVANYEKSIQVAFREVSDALVARDLLDQQVEAQRLVQEAQAERFK 410 Query: 425 FARSRYEAGYSSYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGG 475 FA R++ G +S L+ LDAQR LF Q +QV+L L + LY+ LGGG Sbjct: 411 FATQRFQNGIASSLDVLDAQRELFTAQLSLVQVRLTRLTNAVDLYRSLGGG 461 >A5G784.1 A5G784_GEOUR RND efflux system, outer membrane lipoprotein, NodT family Length = 470 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 230/469 (49%), Positives = 310/469 (66%), Gaps = 2/469 (0%) Query: 8 LRTIAGISLISASLAAC-SLAPSYQQPAFPVAAHWQNDLQKAEPAGTQSDTRQAASIAWT 66 +RT +++++ +LA C ++AP Y +P PV A W + + AG +D A I W Sbjct: 2 IRTTVIVAVLAGALAGCATMAPKYTRPEPPVPAAWPSGPAYKDVAGKPADM-AVADIPWA 60 Query: 67 DFFQDAQLKSVIAAALDHNRDLRMATLNIERARAMYNIQVADQVPNLALNGNGARQRLPA 126 +FF D QL+ V+A +LD+NRDLR+A LNIER+RA Y IQ +D P + + G+ QR+PA Sbjct: 61 EFFLDPQLRKVVALSLDNNRDLRVAALNIERSRAQYQIQRSDLFPKVDASAAGSVQRVPA 120 Query: 127 DVNPTGKAGVNSSYFAGVGLAAFEIDLFGRVRNLSEAALQRYLATEQAQRSAQISLIAEV 186 D++ +G+A + Y G+G++++E+DLFGRVR+L + AL++YLATEQA+RS QISL+AEV Sbjct: 121 DLSGSGQAMIRHQYNVGLGVSSYELDLFGRVRSLKDQALEQYLATEQARRSVQISLVAEV 180 Query: 187 ANTYEALVADRRLLQLTENTLASRADSYERQKQLYAEGASSEYDLRQAESLFEAAKAARA 246 A + AL ADR LQL + TL S+ SY+ K G SS DL QA++ + A+ A Sbjct: 181 AGNWLALAADRERLQLAKETLVSQQASYQLVKSRVEAGVSSALDLHQAQTSVDTARVDIA 240 Query: 247 QQERRKTLDENALTVLVGHPLAADIGTANATSAEQVLPDLPAGLPSDLLTARPDILQQEA 306 + DENAL ++VG P+ A++ A + L D+ GLPSD+L RPDILQ E Sbjct: 241 RYTTFVAQDENALNLVVGSPVPAELLPAALSETLTALKDVAPGLPSDVLLRRPDILQAEG 300 Query: 307 VLRSQNANIGAARAAFFPRISLTGNFGSASSQLSGLFDSGSRSWSFIPQISIPIFEGGRN 366 L+ NANIGAARAAFFPRI+LT + G S LSGLF G+ +WSF PQI++PIF+ G Sbjct: 301 FLKGANANIGAARAAFFPRITLTSSVGVGSDGLSGLFKGGAFAWSFAPQITLPIFDAGSR 360 Query: 367 IANLNVAETDKKIAVAQYEKTVQVAFREVADALAGRATLADEAGAVKAQEAAESARYGFA 426 ANL VAE D+ IAVAQYEK++Q AFREVADALA R T+ D+ A ++ A Y + Sbjct: 361 QANLKVAEVDRDIAVAQYEKSIQTAFREVADALAQRGTIDDQLAAQQSLTDATGESYNLS 420 Query: 427 RSRYEAGYSSYLEYLDAQRSLFAIQQQSIQVQLAELQTRITLYKVLGGG 475 ++RYE G SYL LD+QRSL+ QQ I V+LA L TLYKVLGGG Sbjct: 421 QARYEKGVDSYLNVLDSQRSLYGAQQNMISVRLARLNNLATLYKVLGGG 469