BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0009.p (256 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D4XJI6.1 D4XJI6_9BURK Putative uncharacterized protein 137 2e-30 E1T954.1 E1T954_BURSG Acyl-CoA dehydrogenase domain-containing p... 134 1e-29 A9I434.1 A9I434_BORPD Probable acyl-CoA dehydrogenase EC=1.3.99.- 125 6e-27 C5CRN3.1 C5CRN3_VARPS Acyl-CoA dehydrogenase domain protein 106 4e-21 E6V1H1.1 E6V1H1_VARPD Acyl-CoA dehydrogenase domain-containing p... 100 3e-19 >D4XJI6.1 D4XJI6_9BURK Putative uncharacterized protein Length = 786 Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/241 (39%), Positives = 126/241 (52%), Gaps = 9/241 (3%) Query: 4 DILEQFTDSAHDLLGRTDQRQRLRRLIRNGAAEDRKFWQEIATAGWLAILIPEEAGGLGL 63 D++E DSA DLL R DQRQR R DR +W+E+A AGWL + +PE GGLGL Sbjct: 7 DLIEAIRDSALDLLSRRDQRQR----KRAAGGVDRAYWRELAEAGWLGMSVPESLGGLGL 62 Query: 64 GLSEVAAVTEAIGQHLLPEQFVAAGVHASAALCAIS--TGAQQLD-LLARAGTGDAVVAL 120 G +AAV E G+ LPE V AGV + L + +G+ D LL G ++ L Sbjct: 63 GWHALAAVIEEAGRAQLPEPLVGAGVLGATLLTNLQPLSGSPLRDTLLQTLCDGTRMIGL 122 Query: 121 AWQAAPGQTEAQGACNSV-IAAPVQNDRIGLNGRKIMVLGADTVDGWLVLASREGSACLV 179 AWQ GQ EA A ++ + LNG K V+G D VDGWLV A E L Sbjct: 123 AWQETEGQLEAGEAAGVFGVSVTAREGAYVLNGEKRHVIGGDDVDGWLVTADGEHGTLLF 182 Query: 180 WVPKETAGISCRPIVRIDGSRLDELVFVDACVPSSHILAHADEAITAVDIANDSARLAAG 239 ++ T G++ +P R DG+ L A VP++ +LA +D + AVD A D RL Sbjct: 183 YLEAGTPGVTVQPHARADGTPACHLSIEAAIVPAAALLA-SDGVLDAVDEALDYGRLMQS 241 Query: 240 A 240 A Sbjct: 242 A 242 >E1T954.1 E1T954_BURSG Acyl-CoA dehydrogenase domain-containing protein Length = 771 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/240 (37%), Positives = 127/240 (52%), Gaps = 2/240 (0%) Query: 1 MQNDILEQFTDSAHDLLGRTDQRQRLRRLIRNGAAEDRKFWQEIATAGWLAILIPEEAGG 60 M ++ + F DSA DL+ R D +R L+ A DR W+++A AGW A+LIPE++GG Sbjct: 1 MDSETQQAFKDSARDLIDRGDVARRRAALLAGNGALDRDAWKQMAEAGWTAMLIPEQSGG 60 Query: 61 LGLGLSEVAAVTEAIGQHLLPEQFVAAGVHASAALCAISTGAQQLDLLARAGTGDAVVAL 120 LGLG+ EV A+ E G+ LPE FVAA V A L A+S L+ +G++VV + Sbjct: 61 LGLGVPEVIAIAEEAGRAALPEPFVAAAVLTGAVLAAVSEHGAAQALIEAVVSGESVVGI 120 Query: 121 AWQAAPGQTEAQGACNSVIAAPVQNDRIGLNGRKIMVLGADTVDGWLVLASREGSACLVW 180 AWQ GQ E + +S D I L+G V DGW+VLA+ LVW Sbjct: 121 AWQHGIGQLEP--SADSPTRYRRDGDTIVLDGTLHFVTPLVGADGWVVLANGSEGLMLVW 178 Query: 181 VPKETAGISCRPIVRIDGSRLDELVFVDACVPSSHILAHADEAITAVDIANDSARLAAGA 240 + +T+GI + IDG+ L L V ++ +L +E + + A D AR+A A Sbjct: 179 LAADTSGIELKGSRGIDGASLGTLHLQRCTVQATQVLMEGEEVLDTLARALDIARIAQAA 238 >A9I434.1 A9I434_BORPD Probable acyl-CoA dehydrogenase EC=1.3.99.- Length = 776 Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 93/240 (38%), Positives = 119/240 (49%), Gaps = 9/240 (3%) Query: 5 ILEQFTDSAHDLLGRTDQRQRLRRLIRNGAAEDRKFWQEIATAGWLAILIPEEAGGLGLG 64 +++ DSA D L R DQ+QR R A DR +W+EIA GWL + +PE GGL LG Sbjct: 8 MIDAIRDSARDFLQRRDQKQR----KRQDAPPDRDYWREIAEVGWLGMAVPESLGGLDLG 63 Query: 65 LSEVAAVTEAIGQHLLPEQFVAAGVHASAALCAI--STGAQ-QLDLLARAGTGDAVVALA 121 +AAV E G+ LPE VA V SA L + GAQ + LL G +V LA Sbjct: 64 WHAMAAVMEEAGRAQLPEPLVACAVLPSAVLARLDDDAGAQARRQLLQDICAGQRIVGLA 123 Query: 122 WQAAPGQTEAQGACNSVIAA-PVQNDRIGLNGRKIMVLGADTVDGWLVLASREGSACLVW 180 WQ GQ EA A + A+ ++ LNG K V+ D VDGWLV A E L + Sbjct: 124 WQETDGQLEAGEATGAFGASVTLREGAYVLNGEKRHVIPGDGVDGWLVSADGEQGPALFY 183 Query: 181 VPKETAGISCRPIVRIDGSRLDELVFVDACVPSSHILAHADEAITAVDIANDSARLAAGA 240 V T G++ R DG+R L A +P +LA + A+D A D RL A Sbjct: 184 VAAGTPGVTAAVYRRADGARACHLSLESATLPPQALLAR-QGVLDAIDAALDLGRLMQAA 242 >C5CRN3.1 C5CRN3_VARPS Acyl-CoA dehydrogenase domain protein Length = 775 Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 81/241 (33%), Positives = 113/241 (46%), Gaps = 6/241 (2%) Query: 1 MQNDILEQFTDSAHDLLGRTDQRQRLRRLIRNGAAEDRKFWQEIATAGWLAILIPEEAGG 60 M + L D+A D R+ QR R + A++ + W +A GW +L PE AGG Sbjct: 1 MDTESLSAVRDAALDYFVRSRSIQRRRERMERPDADEAQGWSAMAELGWTGMLAPESAGG 60 Query: 61 LGLGLSEVAAVTEAIGQHLLPEQFVAAGVHASAALCAISTGAQQLDLLARAGTGDAVVAL 120 LGL L+ A + A G+H+ PE +A ++ L + A Q LLA G ++ AL Sbjct: 61 LGLNLAGAAQILRAAGEHVAPEPLLAVAGLSAMLLARLKAPAAQ-SLLAELVAGRSLPAL 119 Query: 121 AWQAAPGQTEAQGACNSVIAAPVQNDRIGLNGRKIMVLGADTVDGWLVLASREGSACLVW 180 AWQ + G A + L G K+MVL GWLV A A L+W Sbjct: 120 AWQESAGDLSAVPLACGCEPRAGHAGGVLLQGEKLMVLPGAAASGWLVSARGSDDAVLLW 179 Query: 181 VPKETAGISCRPIVRIDGSRLDELVFVDACVPSSHILAHADEAITAVDIANDSARLAAGA 240 VP+ TAG+S + +DGS+ L F +P+ +LA A A+ A LAAG Sbjct: 180 VPRGTAGVSETLVPLVDGSQAASLRFEQVALPADAVLAEGPAAQDALRHA-----LAAGQ 234 Query: 241 V 241 V Sbjct: 235 V 235 >E6V1H1.1 E6V1H1_VARPD Acyl-CoA dehydrogenase domain-containing protein Length = 776 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 15/244 (6%) Query: 1 MQNDILEQFTDSAHDLLGRTDQRQRLRRLIRNGAAEDRKFWQEIATAGWLAILIPEEAGG 60 M + L ++A D R+ QR R L+ A + + W+ +A GW +L PE AGG Sbjct: 1 MDIESLSAMREAALDYFVRSRATQRRRALMEQPDAGEAEGWRAMAELGWAGMLAPESAGG 60 Query: 61 LGLGLSEVAAVTEAIGQHLLPEQFVAAGVHASAALCAISTGAQQLDLLARAGTGDAVVAL 120 LGL L A + A G+H PE +A ++ L + T A + LLA TG ++ AL Sbjct: 61 LGLELDGAAEILRAAGEHAAPEPLLAVAGLSAMLLARLDTPAAR-ALLADLITGRSLPAL 119 Query: 121 AWQAAPGQTEAQGACNSVIAAPVQNDRIG---LNGRKIMVLGADTVDGWLVLASREGSAC 177 AWQ E+ G ++V A R G L G K+MVL + GWLV A + A Sbjct: 120 AWQ------ESAGDLSAVPLACGCERRAGSVLLQGEKLMVLPGNAASGWLVSARGDDDAV 173 Query: 178 LVWVPKETAGISCRPIVRIDGSRLDELVFVDACVPSSHILAHADEAITAVDIANDSARLA 237 ++WVP+ T G++ + +DG + L F +P +LA A A+ A LA Sbjct: 174 ILWVPRGTEGVTETLMPLVDGGQASSLRFEQVALPPDAVLAKGPTAQQALRHA-----LA 228 Query: 238 AGAV 241 AG + Sbjct: 229 AGQI 232