BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0103.p         (145 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VXB5.1 F1VXB5_9BURK Inner-membrane translocator                     186   9e-46
A1WGB9.1 A1WGB9_VEREI Inner-membrane translocator                     123   1e-26
B0UCB7.1 B0UCB7_METS4 Inner-membrane translocator                     120   8e-26
Q218G2.1 Q218G2_RHOPB Inner-membrane translocator                     119   1e-25
A8HRQ2.1 A8HRQ2_AZOC5 Amino acid ABC transporter permease protein     119   2e-25

>F1VXB5.1 F1VXB5_9BURK Inner-membrane translocator
          Length = 349

 Score =  186 bits (472), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/135 (77%), Positives = 116/135 (85%)

Query: 1   MGEGGWASMIFAGKEPYYYIALGLLLLTLLANFIIERSFLGYYFRAIKDEPDAARSLGVS 60
           M   GW   +FA K PYYYIALGLL+LTLLAN +IERS+ GYYFRAIKDEPDAARSLGV+
Sbjct: 162 MDRQGWDVFVFASKVPYYYIALGLLVLTLLANLMIERSYFGYYFRAIKDEPDAARSLGVN 221

Query: 61  LSKYKQIAFAVSSFFTAMGGSLYAQKELYIDPASVLGTGMSIKMALVAILGGIGTLFGPL 120
           L KYK IAFAVSSFFTA+GGS YAQKELYIDPASVLGTG+SIKMALV+ILGGIGTLFGP+
Sbjct: 222 LRKYKLIAFAVSSFFTALGGSFYAQKELYIDPASVLGTGLSIKMALVSILGGIGTLFGPV 281

Query: 121 VGAGLLXPPRRGARA 135
           +GAG+L     G RA
Sbjct: 282 LGAGILTLIDEGTRA 296


>A1WGB9.1 A1WGB9_VEREI Inner-membrane translocator
          Length = 357

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 91/135 (67%), Gaps = 2/135 (1%)

Query: 6   WASMIFAGKEPYYYIALGLLLLTLLANFIIERSFLGYYFRAIKDEPDAARSLGVSLSKYK 65
           WA   F  K+PYYYI +G+L+L +   +++ERS LG   +AI+ + DAA SLG+  ++Y 
Sbjct: 158 WAMFQFESKQPYYYIIVGMLVLVMTITWLMERSRLGVCLKAIRGDRDAAESLGIDPTRYT 217

Query: 66  QIAFAVSSFFTAMGGSLYAQKELYIDPASVLGTGMSIKMALVAILGGIGTLFGPLVGAGL 125
             A A+S+F TA+GGS YAQ   +I+P   +GT +SI MAL++I+GG GT+FGPLVGA  
Sbjct: 218 LTALALSAFMTALGGSFYAQFIRFINPERNMGTELSIDMALMSIIGGQGTVFGPLVGALF 277

Query: 126 LXPPRRGARA--GGQ 138
           L P     R+  GGQ
Sbjct: 278 LAPLAEITRSYLGGQ 292


>B0UCB7.1 B0UCB7_METS4 Inner-membrane translocator
          Length = 344

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/131 (51%), Positives = 88/131 (67%), Gaps = 1/131 (0%)

Query: 6   WASMIFA-GKEPYYYIALGLLLLTLLANFIIERSFLGYYFRAIKDEPDAARSLGVSLSKY 64
           W S+ FA  K PY + ALGLL    L  ++IE S  GY++RA+KD+ +AARSLGV + + 
Sbjct: 168 WWSLQFARDKVPYAHFALGLLAAVWLVTYLIEGSRWGYWWRAVKDDAEAARSLGVEVFRS 227

Query: 65  KQIAFAVSSFFTAMGGSLYAQKELYIDPASVLGTGMSIKMALVAILGGIGTLFGPLVGAG 124
           K  A AVS+FFTA+GG  YA    YIDP SV+    S+  AL A+LGGIGTL+GPLVGA 
Sbjct: 228 KMAAAAVSAFFTAVGGGFYAAYVSYIDPESVMSFRFSLLFALPAVLGGIGTLWGPLVGAA 287

Query: 125 LLXPPRRGARA 135
           +L P    +R+
Sbjct: 288 ILIPLTEISRS 298


>Q218G2.1 Q218G2_RHOPB Inner-membrane translocator
          Length = 326

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 1/134 (0%)

Query: 3   EGGWASMIFA-GKEPYYYIALGLLLLTLLANFIIERSFLGYYFRAIKDEPDAARSLGVSL 61
           +  W +  F   K PY+Y ALG  ++  L  F ++ S  GY++RA+KD PDAA SLGV +
Sbjct: 151 KDSWTTFQFTRSKLPYFYFALGFCVVAWLVTFWLQDSKWGYWWRAVKDNPDAAESLGVVV 210

Query: 62  SKYKQIAFAVSSFFTAMGGSLYAQKELYIDPASVLGTGMSIKMALVAILGGIGTLFGPLV 121
              K  A AVS+F TA+GGS YAQ   YIDP SV+    S+ MAL A+LGGIGTL+GP++
Sbjct: 211 FNSKMGAAAVSAFLTAVGGSFYAQFVSYIDPESVMSFHFSLLMALPAVLGGIGTLWGPVL 270

Query: 122 GAGLLXPPRRGARA 135
           GA +L P     R+
Sbjct: 271 GAVILIPLTELTRS 284


>A8HRQ2.1 A8HRQ2_AZOC5 Amino acid ABC transporter permease protein
          Length = 327

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 86/135 (63%), Gaps = 1/135 (0%)

Query: 1   MGEGGWASMIFA-GKEPYYYIALGLLLLTLLANFIIERSFLGYYFRAIKDEPDAARSLGV 59
           +G   W +  FA  K PY+Y  L    +  L  + IE S  GY++RA+KD P+AA SLGV
Sbjct: 151 IGRDSWLTFQFARDKLPYFYFVLVFAAVVWLVTWKIENSKWGYWWRAVKDNPEAAESLGV 210

Query: 60  SLSKYKQIAFAVSSFFTAMGGSLYAQKELYIDPASVLGTGMSIKMALVAILGGIGTLFGP 119
            +   K +A AVS+FFTA+GGS YAQ   YIDP SV+    S+ MAL A+LGGIGTL+GP
Sbjct: 211 VVFNSKMMAAAVSAFFTAVGGSFYAQFLGYIDPESVMTFQFSLLMALPAVLGGIGTLWGP 270

Query: 120 LVGAGLLXPPRRGAR 134
           ++GA +L P     R
Sbjct: 271 VLGAAILIPLTELTR 285