BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0102.p         (78 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VXB4.1 F1VXB4_9BURK Branched-chain amino acid transport ATP-bi...   139   1e-31
D2RFJ6.1 D2RFJ6_ARCPA ABC transporter related protein                 102   1e-20
E8WNJ8.1 E8WNJ8_GEOS8 ABC transporter related protein                 100   5e-20
C5SZG1.1 C5SZG1_ACIDE ABC transporter related protein                 100   6e-20
Q5KVH8.1 Q5KVH8_GEOKA Branched chain amino acid ABC transporter ...    99   3e-19

>F1VXB4.1 F1VXB4_9BURK Branched-chain amino acid transport ATP-binding
           protein livG
          Length = 237

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/78 (84%), Positives = 74/78 (94%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           MDEVMAGLNPTEV+ETV+VVLKIR +GISCLIVEHVLEGIMPIAN IVVLDYGKKIADG+
Sbjct: 160 MDEVMAGLNPTEVKETVEVVLKIRQRGISCLIVEHVLEGIMPIANAIVVLDYGKKIADGT 219

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P ++SN+P VIAAYLG+E
Sbjct: 220 PQEISNNPQVIAAYLGEE 237


>D2RFJ6.1 D2RFJ6_ARCPA ABC transporter related protein
          Length = 247

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 63/77 (81%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DEV+AGLNP EV E ++++  IRD GI+ L++EH++  IM ++++++VLDYGKKIA+G 
Sbjct: 161 LDEVLAGLNPAEVSEMIEIIRDIRDSGITILMIEHLMHAIMNVSDRVIVLDYGKKIAEGK 220

Query: 61  PHDVSNDPHVIAAYLGD 77
           P DV+NDP VI AYLGD
Sbjct: 221 PEDVANDPKVIEAYLGD 237


>E8WNJ8.1 E8WNJ8_GEOS8 ABC transporter related protein
          Length = 241

 Score =  100 bits (250), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/78 (55%), Positives = 67/78 (85%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DEV+AGLNPTE   TV++++K++ QG++ LIVEH++  IM I++++VVL++GKKIA+G+
Sbjct: 162 LDEVVAGLNPTEADRTVELIMKLKAQGLTILIVEHIMRVIMNISDRLVVLNFGKKIAEGT 221

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P +VS+DPHV+ AY G+E
Sbjct: 222 PAEVSSDPHVVQAYFGEE 239


>C5SZG1.1 C5SZG1_ACIDE ABC transporter related protein
          Length = 601

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 43/78 (55%), Positives = 61/78 (78%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DE  AGLNP E +E V V+L+IRD GI+ L++EH ++ +M +++ ++VLDYG+KIA+G+
Sbjct: 509 LDEPAAGLNPQETQELVQVILRIRDMGITVLLIEHHMDLVMAVSDHVIVLDYGQKIAEGT 568

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P  V NDP VIAAYLG E
Sbjct: 569 PEQVQNDPRVIAAYLGAE 586


>Q5KVH8.1 Q5KVH8_GEOKA Branched chain amino acid ABC transporter (ATP-binding
           protein)
          Length = 256

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/78 (57%), Positives = 62/78 (79%)

Query: 1   MDEVMAGLNPTEVRETVDVVLKIRDQGISCLIVEHVLEGIMPIANQIVVLDYGKKIADGS 60
           +DE MAGLNP E ++ VDV+L +R+QG + L VEH +E +M IA++IVVLDYGKKIA+G+
Sbjct: 177 LDEPMAGLNPQESKQLVDVLLAMREQGFTFLFVEHDMETVMAIADRIVVLDYGKKIAEGA 236

Query: 61  PHDVSNDPHVIAAYLGDE 78
           P +++  P VI AYLG+E
Sbjct: 237 PEEIARHPDVIKAYLGEE 254