BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0080.p (273 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IWG7.1 D8IWG7_HERSS Universal stress protein 337 1e-90 A2RQ37.1 A2RQ37_HERSE Probable universal stress protein 337 1e-90 A4G595.1 A4G595_HERAR Putative universal stress protein UspA 313 2e-83 F1W424.1 F1W424_9BURK Universal stress protein 298 6e-79 F1VY03.1 F1VY03_9BURK Universal stress protein 276 3e-72 >D8IWG7.1 D8IWG7_HERSS Universal stress protein Length = 274 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/274 (64%), Positives = 211/274 (77%), Gaps = 1/274 (0%) Query: 1 MTYKTILVHVDQSRHAAARIRLAAQLAASQEAHLVGTSMTGISRFIYPDGVVFIGSVIDS 60 M+YK+ILVHVDQSRHAA RIR+AA+LA +Q+AHL+G+S++GIS FI +G +I + +D Sbjct: 1 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSSVSGISSFITMEGAAYIAAQMDG 60 Query: 61 LRESAQAELQKFEEAARRENV-TFERRLSEDDPAGALVLQARYADLVVLSQTDPDERDSG 119 R+ A A L+ F++ A V + E+R +DD G L LQARYADLVV+SQ D D+ D Sbjct: 61 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDADDS 120 Query: 120 DVYDLPEYVMLNTARPVLTIPYAGVFDKVGDNILVAWDGSMEATRAVTNALPFLRRARNV 179 + DLPEYVMLN+ RPVL IP AG F VG N LVAWDGSME+TRAVT ALP LR+A NV Sbjct: 121 FLTDLPEYVMLNSPRPVLIIPSAGEFKHVGKNALVAWDGSMESTRAVTAALPLLRQADNV 180 Query: 180 DVVLFNPDALYDVHGQQPGADIALYLARHGVKVNLLQQPTEMDIGNALLSLAADTGADLL 239 VV+FN D HG+QPGADIALYLARHGV V + Q+ T +DIGNALLSLAAD G+DLL Sbjct: 181 TVVIFNSDKRLGTHGEQPGADIALYLARHGVTVEVAQEQTPLDIGNALLSLAADKGSDLL 240 Query: 240 VMGGYGHTRFREVLLGGVTKTILNCMTLPVLFSH 273 VMGGYGHTRFREVLLGGVT TIL MTLPVL +H Sbjct: 241 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 274 >A2RQ37.1 A2RQ37_HERSE Probable universal stress protein Length = 274 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 177/274 (64%), Positives = 211/274 (77%), Gaps = 1/274 (0%) Query: 1 MTYKTILVHVDQSRHAAARIRLAAQLAASQEAHLVGTSMTGISRFIYPDGVVFIGSVIDS 60 M+YK+ILVHVDQSRHAA RIR+AA+LA +Q+AHL+G+S++GIS FI +G +I + +D Sbjct: 1 MSYKSILVHVDQSRHAAQRIRIAAELARAQQAHLIGSSVSGISSFITMEGAAYIAAQMDG 60 Query: 61 LRESAQAELQKFEEAARRENV-TFERRLSEDDPAGALVLQARYADLVVLSQTDPDERDSG 119 R+ A A L+ F++ A V + E+R +DD G L LQARYADLVV+SQ D D+ D Sbjct: 61 FRDRALAALENFDKIANSVGVPSCEKRFVDDDAEGGLALQARYADLVVVSQADLDDADDS 120 Query: 120 DVYDLPEYVMLNTARPVLTIPYAGVFDKVGDNILVAWDGSMEATRAVTNALPFLRRARNV 179 + DLPEYVMLN+ RPVL IP AG F VG N LVAWDGSME+TRAVT ALP LR+A NV Sbjct: 121 FLTDLPEYVMLNSPRPVLIIPSAGEFKHVGKNALVAWDGSMESTRAVTAALPLLRQADNV 180 Query: 180 DVVLFNPDALYDVHGQQPGADIALYLARHGVKVNLLQQPTEMDIGNALLSLAADTGADLL 239 VV+FN D HG+QPGADIALYLARHGV V + Q+ T +DIGNALLSLAAD G+DLL Sbjct: 181 TVVIFNSDKRLGTHGEQPGADIALYLARHGVTVEVAQEQTPLDIGNALLSLAADKGSDLL 240 Query: 240 VMGGYGHTRFREVLLGGVTKTILNCMTLPVLFSH 273 VMGGYGHTRFREVLLGGVT TIL MTLPVL +H Sbjct: 241 VMGGYGHTRFREVLLGGVTLTILKTMTLPVLMAH 274 >A4G595.1 A4G595_HERAR Putative universal stress protein UspA Length = 274 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 154/274 (56%), Positives = 202/274 (73%), Gaps = 1/274 (0%) Query: 1 MTYKTILVHVDQSRHAAARIRLAAQLAASQEAHLVGTSMTGISRFIYPDGVVFIGSVIDS 60 M YKTILVHVD S +A RIR+AA +A ++ AHL+GT+MTGISRF+Y D + + S I+ Sbjct: 1 MAYKTILVHVDHSPQSADRIRIAAGIALAENAHLIGTAMTGISRFLYEDHSILLNSRIEM 60 Query: 61 LRESAQAELQKFEEAARRENV-TFERRLSEDDPAGALVLQARYADLVVLSQTDPDERDSG 119 L E A L FE ++ V ++E+RL DDPA LVLQARY+DLVV+SQ + +E D Sbjct: 61 LCERANQSLIDFEAIVKQIGVPSYEKRLINDDPAEGLVLQARYSDLVVISQKNFNEFDPS 120 Query: 120 DVYDLPEYVMLNTARPVLTIPYAGVFDKVGDNILVAWDGSMEATRAVTNALPFLRRARNV 179 V +LPEYV L + RP+L +PY + + IL+AWDGSM ATRA++NALP L+RA++V Sbjct: 121 LVSNLPEYVTLQSVRPILIVPYEAQPSLLANRILIAWDGSMSATRAISNALPLLKRAQDV 180 Query: 180 DVVLFNPDALYDVHGQQPGADIALYLARHGVKVNLLQQPTEMDIGNALLSLAADTGADLL 239 +V+FN A DVHG+ PGADIALYLARHGVKV++L Q E +IG+AL+ LA+D G DL+ Sbjct: 181 TIVVFNAVAQLDVHGELPGADIALYLARHGVKVDVLSQENETNIGSALMVLASDRGYDLV 240 Query: 240 VMGGYGHTRFREVLLGGVTKTILNCMTLPVLFSH 273 VMGGYGH R RE++LGGVT T+L M++P+L SH Sbjct: 241 VMGGYGHARLREIILGGVTLTVLGQMSVPILMSH 274 >F1W424.1 F1W424_9BURK Universal stress protein Length = 279 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 152/279 (54%), Positives = 197/279 (70%), Gaps = 6/279 (2%) Query: 1 MTYKTILVHVDQSRHAAARIRLAAQLAASQEAHLVGTSMTGISRFIYPD-----GVVFIG 55 M+YKTIL+H+D+S + ARI LAAQLA S EAHL+G + TG+S + Y G IG Sbjct: 1 MSYKTILIHLDESPNIDARIDLAAQLAISHEAHLIGLATTGVSHYFYESLSTGAGDPGIG 60 Query: 56 SVIDSLRESAQAELQKFEEAARRENVT-FERRLSEDDPAGALVLQARYADLVVLSQTDPD 114 +++LRE A+ LQ FE+ RR V+ +E+ L++D+ L ++ARY DLV+L Q DP+ Sbjct: 61 PYLETLREQARGRLQHFEDKVRRLGVSSYEKHLADDEAESCLAMRARYCDLVILGQYDPE 120 Query: 115 ERDSGDVYDLPEYVMLNTARPVLTIPYAGVFDKVGDNILVAWDGSMEATRAVTNALPFLR 174 DLPEYV LN PVL IPYAG + D+IL+AWDG EA +AV NALPFL+ Sbjct: 121 GTIPSVYADLPEYVTLNGGCPVLIIPYAGSYPLKPDHILIAWDGGQEAAKAVRNALPFLQ 180 Query: 175 RARNVDVVLFNPDALYDVHGQQPGADIALYLARHGVKVNLLQQPTEMDIGNALLSLAADT 234 A++V+V +FN D HG++PGADIALYL RH VK N+ Q+ TE+ +G ALLSLAAD Sbjct: 181 AAKSVEVAVFNAQQRPDNHGEEPGADIALYLTRHHVKANVRQEQTEIPVGEALLSLAADI 240 Query: 235 GADLLVMGGYGHTRFREVLLGGVTKTILNCMTLPVLFSH 273 ADLLVMG YGH+RFREVL+GGV++TIL+ +TLPVL SH Sbjct: 241 NADLLVMGCYGHSRFREVLMGGVSRTILDSITLPVLMSH 279 >F1VY03.1 F1VY03_9BURK Universal stress protein Length = 290 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 145/290 (50%), Positives = 202/290 (69%), Gaps = 17/290 (5%) Query: 1 MTYKTILVHVDQSRHAAARIRLAAQLAASQEAHLVGTSMTGISRFIYPDGVVF-----IG 55 M+Y +ILVHVD S A RIR+ A+LA +AHL GT+ TG+S Y G + +G Sbjct: 1 MSYPSILVHVDASVRTAERIRIGAELALRTDAHLTGTATTGVSGLFYLPGAIGEGNLQLG 60 Query: 56 SVIDSLRESAQAELQKFEEAARRENV-TFERRLSEDDPAGALVLQARYADLVVLSQTDPD 114 +++D L++ L++FE+ + V +FE+RL +++ + LQARY+DLV++ QT+PD Sbjct: 61 AMLDMLKQRGTFALEEFEQLVSKMGVKSFEKRLVDEEAGPGVSLQARYSDLVIVGQTNPD 120 Query: 115 ERDSGDVYDLPEYVMLNTARPVLTIPYAGVFDKVGDNILVAWDGSMEATRAVTNALPFLR 174 E + PEY+++++ RPVL IPY G F+ +G ILVAWDGSM+ATRAVT A+P L+ Sbjct: 121 EPSPSTADEFPEYLVMHSGRPVLIIPYIGHFEHIGRKILVAWDGSMQATRAVTAAIPLLQ 180 Query: 175 RARNVDVVLFNPDALYDVHGQQPGADIALYLARHGVKVNLLQQPT-----------EMDI 223 +A+ V +V+FNP+A DVHG +PGADIALYLARHG+K+++ T ++D+ Sbjct: 181 QAQQVQLVVFNPEAKPDVHGDEPGADIALYLARHGIKLDVTILTTTEKASKSGRMDDLDV 240 Query: 224 GNALLSLAADTGADLLVMGGYGHTRFREVLLGGVTKTILNCMTLPVLFSH 273 GNALLS AAD ADL+VMGGY H+RFR+VLLGGVT TIL MT+PVL +H Sbjct: 241 GNALLSHAADVDADLIVMGGYAHSRFRQVLLGGVTNTILTSMTVPVLMAH 290