BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0020.p         (89 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J039.1 D8J039_HERSS 50S ribosomal protein L31 type B                168   2e-40
A4G310.1 RL31B_HERAR 50S ribosomal protein L31 type B                 161   3e-38
F1W3N1.1 F1W3N1_9BURK LSU ribosomal protein L31p                      154   3e-36
A6SVL3.1 RL31B_JANMA 50S ribosomal protein L31 type B                 153   6e-36
C3XAD4.1 C3XAD4_OXAFO 50S ribosomal protein L31 type B                149   1e-34

>D8J039.1 D8J039_HERSS 50S ribosomal protein L31 type B
          Length = 89

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/87 (91%), Positives = 85/87 (97%)

Query: 1  MKPGIHPDYREVLFHDVSNDFKFITRSTIGTREKAEFEGKEYPLVKIEVSSESHPFYTGK 60
          MK GIHPDYREVLFHD+SNDFKFITRSTIGTRE AEFEGK+YPLVKIEVSSESHPFYTGK
Sbjct: 1  MKEGIHPDYREVLFHDMSNDFKFITRSTIGTRETAEFEGKQYPLVKIEVSSESHPFYTGK 60

Query: 61 HKIVDTAGRVEKFRQKFGTVGSKTAIA 87
          HKIVDTAGRVEKFRQKFG+VGSKTA++
Sbjct: 61 HKIVDTAGRVEKFRQKFGSVGSKTAVS 87


>A4G310.1 RL31B_HERAR 50S ribosomal protein L31 type B
          Length = 88

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/87 (89%), Positives = 82/87 (94%)

Query: 1  MKPGIHPDYREVLFHDVSNDFKFITRSTIGTREKAEFEGKEYPLVKIEVSSESHPFYTGK 60
          MK GIHP+YREVLFHDVSNDFKFITRSTI TREK EFEG EYPLVKIEVSSESHPFYTGK
Sbjct: 1  MKAGIHPEYREVLFHDVSNDFKFITRSTINTREKIEFEGTEYPLVKIEVSSESHPFYTGK 60

Query: 61 HKIVDTAGRVEKFRQKFGTVGSKTAIA 87
          HKIVDTAGRV+KFR+KFGTVGSKT +A
Sbjct: 61 HKIVDTAGRVDKFRKKFGTVGSKTQMA 87


>F1W3N1.1 F1W3N1_9BURK LSU ribosomal protein L31p
          Length = 89

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/89 (82%), Positives = 81/89 (91%)

Query: 1  MKPGIHPDYREVLFHDVSNDFKFITRSTIGTREKAEFEGKEYPLVKIEVSSESHPFYTGK 60
          MK GIHP+YREVL HD+S DFKFITRST+ TRE AEFEGK+YPLVKIEVSSESHPFYTGK
Sbjct: 1  MKAGIHPNYREVLVHDLSCDFKFITRSTVQTREMAEFEGKQYPLVKIEVSSESHPFYTGK 60

Query: 61 HKIVDTAGRVEKFRQKFGTVGSKTAIAAE 89
          HKIVDTAGRV+KFR+KFG VGS+T IA +
Sbjct: 61 HKIVDTAGRVDKFRKKFGVVGSRTQIAQD 89


>A6SVL3.1 RL31B_JANMA 50S ribosomal protein L31 type B
          Length = 88

 Score =  153 bits (387), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 73/87 (83%), Positives = 80/87 (91%)

Query: 1  MKPGIHPDYREVLFHDVSNDFKFITRSTIGTREKAEFEGKEYPLVKIEVSSESHPFYTGK 60
          MK GIHPDYR+V+F D+SNDFKFITRSTI TRE  EFEG  YPLVKIEVSSESHPFYTGK
Sbjct: 1  MKEGIHPDYRDVVFQDMSNDFKFITRSTIQTRETIEFEGASYPLVKIEVSSESHPFYTGK 60

Query: 61 HKIVDTAGRVEKFRQKFGTVGSKTAIA 87
          HKIVDTAGRV+KFR+KFGTVGSKT++A
Sbjct: 61 HKIVDTAGRVDKFRKKFGTVGSKTSVA 87


>C3XAD4.1 C3XAD4_OXAFO 50S ribosomal protein L31 type B
          Length = 86

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 76/85 (89%)

Query: 1  MKPGIHPDYREVLFHDVSNDFKFITRSTIGTREKAEFEGKEYPLVKIEVSSESHPFYTGK 60
          MK GIHPDYREV+F DVS DFKFITRSTI TRE   FEGKEYPLVK+EVS+ESHPFYTGK
Sbjct: 1  MKEGIHPDYREVVFQDVSCDFKFITRSTIATRETIMFEGKEYPLVKVEVSAESHPFYTGK 60

Query: 61 HKIVDTAGRVEKFRQKFGTVGSKTA 85
          +KIVDTAGRVEKFRQKFG VGSK A
Sbjct: 61 YKIVDTAGRVEKFRQKFGNVGSKVA 85