BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0112.p         (49 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J023.1 D8J023_HERSS C4-dicarboxylate transport transcription r...    97   9e-19
A4G294.1 A4G294_HERAR C4-dicarboxylate transport transcriptional...    94   9e-18
A6SV60.1 A6SV60_JANMA Two-components system response regulator         94   1e-17
F1VYR1.1 F1VYR1_9BURK Putative C4-dicarboxylate transport transc...    91   8e-17
A4TZC4.1 A4TZC4_9PROT Two component transcriptional regulator, L...    84   8e-15

>D8J023.1 D8J023_HERSS C4-dicarboxylate transport transcription regulator
           protein
          Length = 196

 Score = 97.1 bits (240), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/49 (97%), Positives = 49/49 (100%)

Query: 1   VLDLILAGKMNKIIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 49
           VLDLILAGKMNK+IADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK
Sbjct: 148 VLDLILAGKMNKVIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 196


>A4G294.1 A4G294_HERAR C4-dicarboxylate transport transcriptional regulatory
           protein DctR
          Length = 196

 Score = 93.6 bits (231), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 46/49 (93%), Positives = 48/49 (97%)

Query: 1   VLDLILAGKMNKIIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 49
           VLDLIL GKMNK+IAD+LGISMRTVEVHRAHIFDKMNVKTAVELARLLK
Sbjct: 148 VLDLILEGKMNKVIADKLGISMRTVEVHRAHIFDKMNVKTAVELARLLK 196


>A6SV60.1 A6SV60_JANMA Two-components system response regulator
          Length = 197

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/49 (93%), Positives = 48/49 (97%)

Query: 1   VLDLILAGKMNKIIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 49
           VLDLIL GKMNK+IAD+LGISMRTVEVHRAHIFDKMNVKTAVELARLLK
Sbjct: 149 VLDLILEGKMNKVIADKLGISMRTVEVHRAHIFDKMNVKTAVELARLLK 197


>F1VYR1.1 F1VYR1_9BURK Putative C4-dicarboxylate transport transcriptional
           regulatory protein dctR
          Length = 195

 Score = 90.5 bits (223), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 1   VLDLILAGKMNKIIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 49
           VLDLIL GKMNK+IAD+LGISMRTVEVHRAHIFDKMNVKTAVELA LLK
Sbjct: 147 VLDLILIGKMNKVIADQLGISMRTVEVHRAHIFDKMNVKTAVELAGLLK 195


>A4TZC4.1 A4TZC4_9PROT Two component transcriptional regulator, LuxR family
          Length = 203

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 47/49 (95%)

Query: 1   VLDLILAGKMNKIIADELGISMRTVEVHRAHIFDKMNVKTAVELARLLK 49
           V+DL+LAGK+NK+IAD+LGI+MRTVEVHRAH+F+KM VKTAVELA+LL 
Sbjct: 149 VMDLVLAGKLNKVIADDLGITMRTVEVHRAHVFEKMGVKTAVELAQLLS 197