BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0103.p         (153 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IS05.1 D8IS05_HERSS LysR family transcription regulator protein     289   8e-77
D8IP65.1 D8IP65_HERSS LysR family transcription regulator protein     127   6e-28
B1G9W1.1 B1G9W1_9BURK Transcriptional regulator, LysR family          124   3e-27
B2TD35.1 B2TD35_BURPP Transcriptional regulator, LysR family          122   2e-26
B2JU49.1 B2JU49_BURP8 Transcriptional regulator, LysR family          121   4e-26

>D8IS05.1 D8IS05_HERSS LysR family transcription regulator protein
          Length = 324

 Score =  289 bits (740), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 135/153 (88%), Positives = 145/153 (94%)

Query: 1   MVGRSSVSSQPQLYNYEMLRGEPMCIVTGLDHHLATAQKVRLQELSTSSWILYSSNMPMR 60
           M+GRSSVSSQP LY+YEMLRGEPMCIV+G+DH LATAQKVRLQEL+ +SWILYSSNMPMR
Sbjct: 172 MIGRSSVSSQPNLYHYEMLRGEPMCIVSGIDHPLATAQKVRLQELAEASWILYSSNMPMR 231

Query: 61  IWIEHEFKLEGMKVPANVIETASPFVTVTLLAQSNMVAVMPLDIAHFFAAKQMLCILPVH 120
           IWIEHEFKLEG+KVP NVIETASPFVT+TLLAQSNMVAVMPLDIAHFFAAKQML ILPV+
Sbjct: 232 IWIEHEFKLEGVKVPGNVIETASPFVTITLLAQSNMVAVMPLDIAHFFAAKQMLGILPVN 291

Query: 121 LKTRIEHYGIVTRKNATLSSIGKMFINILRQQN 153
           LKTRIEHYGIVTRKN TLSS+ KMFI ILRQQN
Sbjct: 292 LKTRIEHYGIVTRKNTTLSSLAKMFIQILRQQN 324


>D8IP65.1 D8IP65_HERSS LysR family transcription regulator protein
          Length = 321

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 1/152 (0%)

Query: 1   MVGRSSVSSQPQLYNYEMLRGEPMCIVTGLDHHLATAQKVRLQELSTSSWILYSSNMPMR 60
           +V R+SVS+ P  Y+Y+ L  EP+ +V   +H     ++++L  L+   WI Y S+MP+ 
Sbjct: 167 LVARASVSAHPGKYHYQSLSEEPLSVVVSAEHPRPRGKELQLAALAGYRWITYPSHMPLH 226

Query: 61  IWIEHEFKLEGMKVPANVIETASPFVTVTLLAQ-SNMVAVMPLDIAHFFAAKQMLCILPV 119
             +E E  L G+ +PAN I TAS FVTV LL Q ++MV+++P  +A  F  + ML ILPV
Sbjct: 227 AVLEREMDLAGLSMPANTIATASTFVTVALLQQGADMVSILPTAVAEMFVQRGMLRILPV 286

Query: 120 HLKTRIEHYGIVTRKNATLSSIGKMFINILRQ 151
            L++  +  GIVTRK   LS  G+ F+ +LR+
Sbjct: 287 KLRSMSQTIGIVTRKGGQLSGAGQAFVQLLRE 318


>B1G9W1.1 B1G9W1_9BURK Transcriptional regulator, LysR family
          Length = 332

 Score =  124 bits (312), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 96/152 (63%), Gaps = 1/152 (0%)

Query: 1   MVGRSSVSSQPQLYNYEMLRGEPMCIVTGLDHHLATAQKVRLQELSTSSWILYSSNMPMR 60
           M+GR++V++ P  Y Y  L  EP+ +V G  H     ++V+L +L+   W++Y S+MP+ 
Sbjct: 155 MIGRAAVAADPSKYQYRPLADEPLSVVVGYGHPPLPRKEVKLGDLADHRWVMYPSHMPLH 214

Query: 61  IWIEHEFKLEGMKVPANVIETASPFVTVTLL-AQSNMVAVMPLDIAHFFAAKQMLCILPV 119
             +E E  L G+ +P N I TAS FVTV LL +++++V+++P  IA  F  ++ML  +PV
Sbjct: 215 ALLEREMDLAGLTMPDNPISTASTFVTVALLQSRADLVSLLPTAIAEMFIRQKMLRAVPV 274

Query: 120 HLKTRIEHYGIVTRKNATLSSIGKMFINILRQ 151
            LK+  + +G+VTRK   LS   + F+ +LRQ
Sbjct: 275 KLKSPSQTFGVVTRKGGVLSPPAERFVELLRQ 306


>B2TD35.1 B2TD35_BURPP Transcriptional regulator, LysR family
          Length = 327

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 97/153 (63%), Gaps = 1/153 (0%)

Query: 1   MVGRSSVSSQPQLYNYEMLRGEPMCIVTGLDHHLATAQKVRLQELSTSSWILYSSNMPMR 60
           ++GR++V++ P  Y+Y  L  EP+ +V G  H     ++V+L++L+   W++Y S+MP+ 
Sbjct: 155 VIGRATVAADPSKYHYRPLGDEPLSVVVGYGHPPLPKKEVKLRDLAGHRWVMYPSHMPLH 214

Query: 61  IWIEHEFKLEGMKVPANVIETASPFVTVTLLAQS-NMVAVMPLDIAHFFAAKQMLCILPV 119
             +E E  L G+++P N + TAS FVTV LL  S ++V+++P  IA  F  ++ML ++PV
Sbjct: 215 ALLEREMDLAGLQMPDNPVSTASTFVTVALLQSSHDLVSLLPTAIAALFVRQKMLRLVPV 274

Query: 120 HLKTRIEHYGIVTRKNATLSSIGKMFINILRQQ 152
            LK+  + +GIVTRK   LS   + FI +L  Q
Sbjct: 275 KLKSPSQTFGIVTRKGGVLSPPAEQFIELLCAQ 307


>B2JU49.1 B2JU49_BURP8 Transcriptional regulator, LysR family
          Length = 305

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 92/147 (62%), Gaps = 1/147 (0%)

Query: 4   RSSVSSQPQLYNYEMLRGEPMCIVTGLDHHLATAQKVRLQELSTSSWILYSSNMPMRIWI 63
           R++V+ QP  Y+Y  LR EP+ IV    H LA A+KV+L +L++S WI+Y S MP+R   
Sbjct: 158 RTTVAQQPDHYDYVELRDEPLAIVASPLHRLAKARKVKLADLASSRWIVYPSIMPLRGLF 217

Query: 64  EHEFKLEGMKVPANVIETASPFVTVTLLAQS-NMVAVMPLDIAHFFAAKQMLCILPVHLK 122
           E EFK  G+ VP + IETAS   TV +L +   +V++MP D+A   A   +   L + ++
Sbjct: 218 EREFKEAGLSVPPHPIETASTMTTVLMLQRDPTLVSLMPRDMAALLADHGLARPLAIDVR 277

Query: 123 TRIEHYGIVTRKNATLSSIGKMFINIL 149
           +R E YGIVTR+   LS+  ++ I+ L
Sbjct: 278 SRTEPYGIVTRRGCALSAAAQLMIDEL 304