BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0088.p         (145 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IS17.1 D8IS17_HERSS Universal stress protein                        245   1e-63
A2RPS1.1 A2RPS1_HERSE Universal stress protein                        245   1e-63
F1W3P2.1 F1W3P2_9BURK Universal stress protein                        186   8e-46
A4G276.1 A4G276_HERAR Universal stress protein UspA                   159   1e-37
A6SV26.1 A6SV26_JANMA Universal stress protein (Usp)                  157   7e-37

>D8IS17.1 D8IS17_HERSS Universal stress protein
          Length = 145

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/145 (78%), Positives = 131/145 (90%)

Query: 1   MFKTILVPTDGSERSDKAIANAIDYAQHCKSRIIGISVAEPYPFSPLAESSMAIDPGIYE 60
           MFKTILVPTDGSERSDKAIA A+DYA++  +R+IGI+VAEPYPFSPLAESSMAIDP +YE
Sbjct: 1   MFKTILVPTDGSERSDKAIATAVDYAKNSGARLIGITVAEPYPFSPLAESSMAIDPALYE 60

Query: 61  ENVRTLAEQHVKKIADAALAAGVECETTTILSFAPDEEIVNAAKKYACDVIFMASHGRSG 120
           ENV+TLA+QH+KKI DAA AAGV C+T  ++SF PDEEI+ AA+ +ACD IFMASHGRSG
Sbjct: 61  ENVKTLAQQHIKKITDAATAAGVPCQTEIVMSFNPDEEIIKAAQLHACDAIFMASHGRSG 120

Query: 121 LSRLFLGSKTQKVLAHSTIPVLVLR 145
           LSR+FLGSKTQKVL HSTIPVLVLR
Sbjct: 121 LSRIFLGSKTQKVLTHSTIPVLVLR 145


>A2RPS1.1 A2RPS1_HERSE Universal stress protein
          Length = 145

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/145 (78%), Positives = 131/145 (90%)

Query: 1   MFKTILVPTDGSERSDKAIANAIDYAQHCKSRIIGISVAEPYPFSPLAESSMAIDPGIYE 60
           MFKTILVPTDGSERSDKAIA A+DYA++  +R+IGI+VAEPYPFSPLAESSMAIDP +YE
Sbjct: 1   MFKTILVPTDGSERSDKAIATAVDYAKNSGARLIGITVAEPYPFSPLAESSMAIDPALYE 60

Query: 61  ENVRTLAEQHVKKIADAALAAGVECETTTILSFAPDEEIVNAAKKYACDVIFMASHGRSG 120
           ENV+TLA+QH+KKI DAA AAGV C+T  ++SF PDEEI+ AA+ +ACD IFMASHGRSG
Sbjct: 61  ENVKTLAQQHIKKITDAATAAGVPCQTEIVMSFNPDEEIIKAAQLHACDAIFMASHGRSG 120

Query: 121 LSRLFLGSKTQKVLAHSTIPVLVLR 145
           LSR+FLGSKTQKVL HSTIPVLVLR
Sbjct: 121 LSRIFLGSKTQKVLTHSTIPVLVLR 145


>F1W3P2.1 F1W3P2_9BURK Universal stress protein
          Length = 145

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 114/145 (78%)

Query: 1   MFKTILVPTDGSERSDKAIANAIDYAQHCKSRIIGISVAEPYPFSPLAESSMAIDPGIYE 60
           MFKTILVPTDGS  SDKAI  AI++AQ   +RI+G+SVAEPYP+SPL+E ++ ID   Y+
Sbjct: 1   MFKTILVPTDGSALSDKAIHAAIEFAQLTGARIVGLSVAEPYPYSPLSEGAITIDSTAYQ 60

Query: 61  ENVRTLAEQHVKKIADAALAAGVECETTTILSFAPDEEIVNAAKKYACDVIFMASHGRSG 120
           E +  +A  +V++IADAA AA V CET    SF+P EEIV+ A  + CDV+FMASHGR G
Sbjct: 61  EKMLEIARSNVRQIADAASAANVTCETHVRESFSPYEEIVSVADLHGCDVVFMASHGRKG 120

Query: 121 LSRLFLGSKTQKVLAHSTIPVLVLR 145
           L++LF+GS+TQKVLAHST+PVLV R
Sbjct: 121 LNKLFVGSETQKVLAHSTLPVLVFR 145


>A4G276.1 A4G276_HERAR Universal stress protein UspA
          Length = 147

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/147 (55%), Positives = 103/147 (70%), Gaps = 2/147 (1%)

Query: 1   MFKTILVPTDGSERSDKAIANAIDYAQHCKSRIIGISVAEPYPFSPLAESS--MAIDPGI 58
           MFK ILVPTDGS  SDKAI  AI++A+     ++ + VAEPY +S L E +    +D   
Sbjct: 1   MFKKILVPTDGSPLSDKAITAAIEFAKTVNGELVTLCVAEPYVYSALVEGAGVFPMDSVA 60

Query: 59  YEENVRTLAEQHVKKIADAALAAGVECETTTILSFAPDEEIVNAAKKYACDVIFMASHGR 118
           Y+E  + +A+ +V K A  A A GV C+T   LSF+P EEIV  A+  ACDVIFMASHGR
Sbjct: 61  YDEKAQEIAQHNVDKAAALARAQGVTCKTAVALSFSPYEEIVRTAEASACDVIFMASHGR 120

Query: 119 SGLSRLFLGSKTQKVLAHSTIPVLVLR 145
            GL++LF+GS+TQKVLAHSTIPVLV R
Sbjct: 121 KGLNKLFVGSETQKVLAHSTIPVLVFR 147


>A6SV26.1 A6SV26_JANMA Universal stress protein (Usp)
          Length = 147

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/147 (51%), Positives = 105/147 (71%), Gaps = 2/147 (1%)

Query: 1   MFKTILVPTDGSERSDKAIANAIDYAQHCKSRIIGISVAEPYPFSPLAESS--MAIDPGI 58
           MFK IL+PTDGS  SDKA+  AI++AQ   S ++ +SVAEPY +  L E +     DP +
Sbjct: 1   MFKKILIPTDGSPLSDKAVDAAIEFAQKMGSELLVLSVAEPYVYMGLMEGAGVFPTDPVM 60

Query: 59  YEENVRTLAEQHVKKIADAALAAGVECETTTILSFAPDEEIVNAAKKYACDVIFMASHGR 118
           Y++ V+ LA++H+ K+  A    GV C+T   +  +P EEIV  A++  CDVIFMASHGR
Sbjct: 61  YDDKVKELAQKHLDKVEAATRDKGVSCKTVVSVGLSPYEEIVRVAEEQKCDVIFMASHGR 120

Query: 119 SGLSRLFLGSKTQKVLAHSTIPVLVLR 145
            GL++LF+GS+TQKVLAH+++PVLVLR
Sbjct: 121 KGLNKLFIGSETQKVLAHTSLPVLVLR 147