BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0069.p (283 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8NXT5.1 D8NXT5_RALSO Putative Glutamyl-tRNA amidotransferase/am... 338 5e-91 Q8Y1V0.1 Q8Y1V0_RALSO Probable amidase protein EC=3.-.-.- 330 2e-88 D8N7A3.1 D8N7A3_RALSO Putative Glutamyl-tRNA amidotransferase/am... 329 2e-88 Q1LM20.1 Q1LM20_RALME Amidase EC=3.5.1.4 318 5e-85 D8NP15.1 D8NP15_RALSO Putative Glutamyl-tRNA amidotransferase/am... 316 3e-84 >D8NXT5.1 D8NXT5_RALSO Putative Glutamyl-tRNA amidotransferase/amidase (GatA) EC=3.5.1.4 Length = 448 Score = 338 bits (867), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 183/260 (70%), Positives = 199/260 (76%), Gaps = 6/260 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV G+VTAAGS+ALA PAA +DA AV RLR AGAVLLGRTNMSEFAFSGLGL Sbjct: 78 VSIKDLFDVAGQVTAAGSRALAHQPAATSDATAVARLRAAGAVLLGRTNMSEFAFSGLGL 137 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P DGTR GGSTSGGAV+VAG MAV ALGTDTGGSIRIPSAFC LTGFKPT Sbjct: 138 NPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPSAFCALTGFKPT 197 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV + G VPLST+LDS GPLA SVDCCAI DA+LSG+TL TDAVPLAGLR G+T D+V Sbjct: 198 ARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQTLDTDAVPLAGLRLGLTRDYV 257 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAWTGRCR 240 +DD V AF+ A+ARL+ AGA I RF FPEL LP IN GG L A AW Sbjct: 258 GADLDDTVTTAFERAVARLEHAGARIVRFDFPELLRLPEINGGG---GLPAAEAWAWH-- 312 Query: 241 CRPHWIRPGRWRAASIAARL 260 RPH R +AAR+ Sbjct: 313 -RPHLARAEAQYDHRVAARI 331 >Q8Y1V0.1 Q8Y1V0_RALSO Probable amidase protein EC=3.-.-.- Length = 448 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 179/260 (68%), Positives = 198/260 (76%), Gaps = 6/260 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV G+VTAAGS+ALA AA +DA AV RLR AGAVLLGRTNMSEFAFSGLGL Sbjct: 78 VSIKDLFDVAGQVTAAGSRALAHQSAATSDATAVARLRAAGAVLLGRTNMSEFAFSGLGL 137 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P DGTR GGSTSGGAV+VAG MAV ALGTDTGGSIRIP+AFC LTGFKPT Sbjct: 138 NPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCALTGFKPT 197 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV + G VPLST+LDS GPLA SVDCCAI DA+LSG+ L TDAVPLAGLR G+T D+V Sbjct: 198 ARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLGLTRDYV 257 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAWTGRCR 240 +DD V AF A+A+L++AGA I RF FPEL +LP IN GG L A AW Sbjct: 258 AADLDDTVATAFARAVAQLERAGAHIVRFEFPELLQLPEINGGG---GLPAAEAWAWH-- 312 Query: 241 CRPHWIRPGRWRAASIAARL 260 RPH R +AAR+ Sbjct: 313 -RPHLARAEAQYDRRVAARI 331 >D8N7A3.1 D8N7A3_RALSO Putative Glutamyl-tRNA amidotransferase/amidase (GatA) EC=3.5.1.4 Length = 448 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 177/247 (71%), Positives = 193/247 (78%), Gaps = 6/247 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV G+VTAAGS+ALA AA +DA AV RLR AGAVLLGRTNMSEFAFSGLGL Sbjct: 78 VSIKDLFDVAGQVTAAGSRALAHQRAATSDATAVARLRAAGAVLLGRTNMSEFAFSGLGL 137 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P DGTR GGSTSGGAV+VAG MAV ALGTDTGGSIRIP+AFC LTGFKPT Sbjct: 138 NPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCALTGFKPT 197 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV + G VPLST+LDS GPLA SVDCCAI DA+LSG+ L TDAVPLAGLR G+T D+V Sbjct: 198 ARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLGLTRDYV 257 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAWTGRCR 240 +DD V AF A+ARL++AGA I RF FPEL +LP IN GG L A AW Sbjct: 258 AADLDDTVATAFARAVARLERAGAHIVRFEFPELLQLPEINGGG---GLPAAEAWAWH-- 312 Query: 241 CRPHWIR 247 RPH R Sbjct: 313 -RPHLAR 318 >Q1LM20.1 Q1LM20_RALME Amidase EC=3.5.1.4 Length = 440 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 173/235 (73%), Positives = 184/235 (78%), Gaps = 3/235 (1%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 +SIKDLFDV+G+VT AGSKAL AQAD+ AV RLR AGAVL+GRTNMSEFAFSGLGL Sbjct: 75 ISIKDLFDVRGQVTRAGSKALDGGAPAQADSPAVARLRAAGAVLIGRTNMSEFAFSGLGL 134 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P D RV GGSTSGGAVSVA DMAV ALGTDTGGSIRIPSAFCGLTGFKPT Sbjct: 135 NPHYGTPRTPFDPERVAGGSTSGGAVSVAEDMAVAALGTDTGGSIRIPSAFCGLTGFKPT 194 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV LDGAVPLST+LDSAGPLARSV CC DA+LSGETL T A L GLRF VT DFV Sbjct: 195 ARRVPLDGAVPLSTSLDSAGPLARSVACCVAMDAVLSGETLDTRAADLRGLRFYVTRDFV 254 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAW 235 DG+D V F+AALARL GA I F FPEL+ LP IN GG L A +W Sbjct: 255 CDGLDPEVAQTFEAALARLSAQGATIVPFDFPELRRLPEINGGG---GLTAAESW 306 >D8NP15.1 D8NP15_RALSO Putative Glutamyl-tRNA amidotransferase/amidase (GatA) EC=3.5.1.4 Length = 448 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 178/260 (68%), Positives = 198/260 (76%), Gaps = 6/260 (2%) Query: 1 VSIKDLFDVQGEVTAAGSKALADAPAAQADALAVTRLRHAGAVLLGRTNMSEFAFSGLGL 60 VSIKDLFDV G+V+AAGS+ALA P A ADA+AV RLR AGAVLLGRTNMSEFAFSGLGL Sbjct: 78 VSIKDLFDVAGQVSAAGSRALAHQPPATADAVAVARLRAAGAVLLGRTNMSEFAFSGLGL 137 Query: 61 NPHYGTPRNPLDGTRVTGGSTSGGAVSVAGDMAVMALGTDTGGSIRIPSAFCGLTGFKPT 120 NPHYGTPR P DGTR GGSTSGGAV+VAG MAV ALGTDTGGSIRIP+AFC LTGFKPT Sbjct: 138 NPHYGTPRTPADGTRAAGGSTSGGAVTVAGGMAVAALGTDTGGSIRIPAAFCALTGFKPT 197 Query: 121 ARRVSLDGAVPLSTTLDSAGPLARSVDCCAIADAILSGETLATDAVPLAGLRFGVTEDFV 180 ARRV + G VPLST+LDS GPLA SVDCCAI DA+LSG+ L TDAVPLAGLR G+T D+V Sbjct: 198 ARRVPMAGGVPLSTSLDSGGPLANSVDCCAIVDAVLSGQALDTDAVPLAGLRLGLTRDYV 257 Query: 181 NDGMDDAVRAAFDAALARLQKAGALIQRFSFPELKELPSINAGGVSSRLRGASAWTGRCR 240 +DD V AF A+ RL++AGA I RF FPEL +LP IN GG L A +W Sbjct: 258 GADLDDTVATAFQRAVMRLEQAGARIVRFDFPELLQLPEINGGG---GLPAAESWAWH-- 312 Query: 241 CRPHWIRPGRWRAASIAARL 260 RPH R +AAR+ Sbjct: 313 -RPHLARAEAQYDRRVAARI 331