BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0060.p (446 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IS30.1 D8IS30_HERSS Probable ubiquinone biosynthesis protein UbiB 808 0.0 A4G8Y0.1 A4G8Y0_HERAR Probable ubiquinone biosynthesis protein UbiB 746 0.0 A6T2Q1.1 A6T2Q1_JANMA Probable ubiquinone biosynthesis protein UbiB 744 0.0 F1VYW3.1 F1VYW3_9BURK Ubiquinone biosynthesis monooxygenase UbiB 731 0.0 C6BC23.1 C6BC23_RALP1 Probable ubiquinone biosynthesis protein UbiB 644 0.0 >D8IS30.1 D8IS30_HERSS Probable ubiquinone biosynthesis protein UbiB Length = 524 Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/446 (89%), Positives = 425/446 (95%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P DIA+ELT LQDRVPPFDS+LA+ QIEKSLGAHPD+LFA+F+RTP+ASASIAQVHFA Sbjct: 78 LMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPDLLFATFERTPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 TLKDG EVAVKVLRPGMR IDHDIGLMH+AADW+ERLWADGRRLKAKEVVGEFDKYLHD Sbjct: 138 TLKDGKEVAVKVLRPGMRDIIDHDIGLMHVAADWLERLWADGRRLKAKEVVGEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAANASQLRRNFA S LLMVPEMYWDYCS SVIVMERMHGIPI QTERL+AEGV Sbjct: 198 ELDLMREAANASQLRRNFAESTLLMVPEMYWDYCSPSVIVMERMHGIPISQTERLRAEGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVS AP +FGRYIALDFGIVGTL DFDK Sbjct: 258 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDLWKTAKPYLERWM+EQIG Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYLERWMSEQIG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRGF++QLKVEVPRYSRLLP+LPRLAHQALT TEG QN +L+RKL+AEQRRTN+ L Sbjct: 438 WRGFVEQLKVEVPRYSRLLPELPRLAHQALTRYTEGDSQPQNTELIRKLLAEQRRTNMFL 497 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFLRY 446 GVIVYFGGGLIGG+IV+Q+L+HFL++ Sbjct: 498 GVIVYFGGGLIGGVIVIQLLMHFLKF 523 >A4G8Y0.1 A4G8Y0_HERAR Probable ubiquinone biosynthesis protein UbiB Length = 520 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/443 (81%), Positives = 394/443 (88%), Gaps = 2/443 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P+DIADEL RLQDRVPPF S+LAIAQI KSLGAHPDVLFA F+ P+ASASIAQVHFA Sbjct: 78 LMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAHFEAEPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LK+G +VAVKVLRPG+R +ID D+ LMHI A VE+LWADG+RLK KEVV EFDKYLHD Sbjct: 138 RLKNGRDVAVKVLRPGVRKSIDDDVALMHIVAGLVEKLWADGKRLKPKEVVAEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA S LL+VPEM+WDYCS+SVIVMERM GIPI QT+RL A G+ Sbjct: 198 ELDLMREAANGSQLRRNFAASKLLVVPEMFWDYCSTSVIVMERMIGIPISQTDRLIAAGI 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VS AP TFGRYIALDFGIVGTL DFDK Sbjct: 258 DLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVAPETFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPL +ISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLE WMNEQ+G Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLENWMNEQVG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRGF++ LK E PRYS+LLPQLPRLAHQALT A+E + N +L+R+L+ EQ+RTNLLL Sbjct: 438 WRGFLENLKAEAPRYSKLLPQLPRLAHQALTQASEP--RQDNTELIRRLLEEQKRTNLLL 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHF 443 GV VYFGGGL+ G I+ + F Sbjct: 496 GVAVYFGGGLVAGGILTLMFFTF 518 >A6T2Q1.1 A6T2Q1_JANMA Probable ubiquinone biosynthesis protein UbiB Length = 521 Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/444 (80%), Positives = 393/444 (88%), Gaps = 2/444 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P+DIADEL RLQDRVPPF S+LAIAQI KSLGAHPDVLFA FD P+ASASIAQVHF Sbjct: 78 LMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPDVLFAEFDPVPVASASIAQVHFG 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LK+GT VA+KVLRPG++ +ID D+ LMHI A VER+WADG+RLK KEVV EFDKYLHD Sbjct: 138 RLKNGTAVAIKVLRPGIKKSIDEDVALMHILAGLVERMWADGKRLKPKEVVAEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA+S+LL+VPEM+WDYCS+SVIVMERM GIPI QT+RL A GV Sbjct: 198 ELDLMREAANGSQLRRNFADSNLLVVPEMFWDYCSTSVIVMERMVGIPISQTDRLIAAGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 DL KLSRDGVEIFFTQVFRDGFFHADMHPGNI VS PATFGRYIALDFGIVGTL DFDK Sbjct: 258 DLKKLSRDGVEIFFTQVFRDGFFHADMHPGNIQVSVEPATFGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPL +ISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLE WMNEQ+G Sbjct: 378 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLENWMNEQVG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRG + LK E PRYS+LLPQLPRLAHQALT A++ N +L+++L+ EQ+RTNLLL Sbjct: 438 WRGLWENLKAEAPRYSKLLPQLPRLAHQALTQASQP--QNDNTELIKRLLEEQKRTNLLL 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFL 444 GV +YFGGGL+ G I+ V F+ Sbjct: 496 GVAIYFGGGLVAGGILTLVFFTFV 519 >F1VYW3.1 F1VYW3_9BURK Ubiquinone biosynthesis monooxygenase UbiB Length = 523 Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/446 (78%), Positives = 391/446 (87%), Gaps = 2/446 (0%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 L+P DIA+ELT LQDRVPPFDS+LAIAQI KSLGAHP LFASFDR P+ASASIAQVHFA Sbjct: 78 LMPPDIAEELTSLQDRVPPFDSELAIAQITKSLGAHPSELFASFDRVPVASASIAQVHFA 137 Query: 61 TLKDGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDKYLHD 120 LKDG EVAVKVLRPGM+ +ID D+ LMH+AA VERLWAD +RLK +EVVGEFDKYLHD Sbjct: 138 VLKDGREVAVKVLRPGMKKSIDEDVALMHVAAGLVERLWADAKRLKPREVVGEFDKYLHD 197 Query: 121 ELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQAEGV 180 ELDLMREAAN SQLRRNFA+S LLMVPEM WDYCSS+VIVMERM GIPI + ++L A GV Sbjct: 198 ELDLMREAANGSQLRRNFADSTLLMVPEMMWDYCSSAVIVMERMKGIPISRIDQLVAAGV 257 Query: 181 DLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLTDFDK 240 D+ KLS DGVEIFFTQVFRDGFFHADMHPGNILVS PAT GRYIALDFGIVGTL DFDK Sbjct: 258 DMKKLSSDGVEIFFTQVFRDGFFHADMHPGNILVSIEPATLGRYIALDFGIVGTLNDFDK 317 Query: 241 DYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISFGQ 300 DYLSQNFLAFF+RDYKRVAEAHIESGWAPK+TRVDELE+AVRACCEPIFDRPLKDISFGQ Sbjct: 318 DYLSQNFLAFFRRDYKRVAEAHIESGWAPKETRVDELESAVRACCEPIFDRPLKDISFGQ 377 Query: 301 VLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMNEQIG 360 +LLRLFQTSRRFNVEVQPQLVLLQKTLLN+EGLGRQLDP+LDLWKTAKPYLERWM EQIG Sbjct: 378 ILLRLFQTSRRFNVEVQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYLERWMTEQIG 437 Query: 361 WRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRTNLLL 420 WRG +++LK E P Y++LLPQLPR+ HQAL + ++ N LL L+AEQRRTN L+ Sbjct: 438 WRGLVERLKAEAPHYNKLLPQLPRMMHQALAQIAQP--NDDNKVLLVALLAEQRRTNRLI 495 Query: 421 GVIVYFGGGLIGGIIVVQVLLHFLRY 446 G +VYF GLIGG+++V+ + +L + Sbjct: 496 GTVVYFAAGLIGGLLLVRFVGRWLAW 521 >C6BC23.1 C6BC23_RALP1 Probable ubiquinone biosynthesis protein UbiB Length = 525 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/450 (70%), Positives = 361/450 (80%), Gaps = 5/450 (1%) Query: 1 LLPLDIADELTRLQDRVPPFDSDLAIAQIEKSLGAHPDVLFASFDRTPIASASIAQVHFA 60 LLP D+ADEL +LQDRVPPFD +A A +EKSLG LF FD P+ASASIAQVHFA Sbjct: 77 LLPPDVADELAKLQDRVPPFDPKVAAAIVEKSLGKPLSALFHRFDHHPVASASIAQVHFA 136 Query: 61 TLK----DGTEVAVKVLRPGMRSTIDHDIGLMHIAADWVERLWADGRRLKAKEVVGEFDK 116 TL+ DG EVAVKVLRPGM ID D+ LM A W+E+LWAD +RLK +EVV EFDK Sbjct: 137 TLRGGPYDGREVAVKVLRPGMLPVIDSDLALMRDLATWIEKLWADAKRLKPREVVAEFDK 196 Query: 117 YLHDELDLMREAANASQLRRNFANSDLLMVPEMYWDYCSSSVIVMERMHGIPIGQTERLQ 176 YLHDELDLMREAANASQLRRNFA SDLL+VPE++WD+C+S V VMERMHG+ I TE L+ Sbjct: 197 YLHDELDLMREAANASQLRRNFAKSDLLLVPEVFWDWCTSEVFVMERMHGMRISHTEELR 256 Query: 177 AEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHPGNILVSTAPATFGRYIALDFGIVGTLT 236 A GVD+ KL+RDGVEIFFTQVFRDGFFHADMHPGNILVS AP T GRYIALDFGIVG L+ Sbjct: 257 AAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPGNILVSVAPETLGRYIALDFGIVGALS 316 Query: 237 DFDKDYLSQNFLAFFQRDYKRVAEAHIESGWAPKDTRVDELEAAVRACCEPIFDRPLKDI 296 +FDK+YL+QNFLAFFQRDY RVA HIESGWAP++TRV+ELE A+RACCEP FDRPL +I Sbjct: 317 EFDKNYLAQNFLAFFQRDYHRVAVLHIESGWAPEETRVEELEGAIRACCEPYFDRPLGEI 376 Query: 297 SFGQVLLRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYLERWMN 356 S G VL+RLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDP+LDLWKTAKP+LERWM+ Sbjct: 377 SLGLVLMRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFLERWMH 436 Query: 357 EQIGWRGFIQQLKVEVPRYSRLLPQLPRLAHQALTMATEGGRHEQNADLLRKLVAEQRRT 416 EQIGWRGF+++LKVE P+++ LP PRL HQ L + + Q A L L+AEQ+RT Sbjct: 437 EQIGWRGFVERLKVEAPQWANKLPDFPRLVHQILDRHSREDGNAQTAALT-ALLAEQKRT 495 Query: 417 NLLLGVIVYFGGGLIGGIIVVQVLLHFLRY 446 N LL + F GG GI+ VL RY Sbjct: 496 NRLLSAALLFVGGFAVGIVATHVLAWMARY 525