BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0056.p         (244 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T2Q4.1 A6T2Q4_JANMA Ubiquinone/menaquinone biosynthesis methyl...   473   e-131
D8IS33.1 D8IS33_HERSS Ubiquinone/menaquinone biosynthesis methyl...   472   e-131
A4G8Y3.1 A4G8Y3_HERAR Ubiquinone/menaquinone biosynthesis methyl...   466   e-129
F1W0Y3.1 F1W0Y3_9BURK Ubiquinone/menaquinone biosynthesis methyl...   449   e-124
E5ALR4.1 E5ALR4_BURRH Ubiquinone/menaquinone biosynthesis methyl...   413   e-113

>A6T2Q4.1 A6T2Q4_JANMA Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE EC=2.1.1.-
          Length = 244

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 220/244 (90%), Positives = 238/244 (97%)

Query: 1   MTNTTHFGYQTVSEDDKVHKVAEVFHSVAAKYDVMNDFMSAGLHRIWKAFTIAQAGVRPG 60
           MTN+THFGYQTV+E++KVHKVAEVFHSVAAKYDVMNDFMSAGLHR+WK FTIAQAGVRPG
Sbjct: 1   MTNSTHFGYQTVAEEEKVHKVAEVFHSVAAKYDVMNDFMSAGLHRLWKTFTIAQAGVRPG 60

Query: 61  FKVLDIAGGTGDLSKAFAKQAGPNGEVWLTDINESMLRVGRDRLLNKGIPTPTLLCDAEK 120
           FKVLDIAGGTGDL+KAFA+QAG +GEVWLTDINESMLRVGRDRLLNKG+ TPT LCDAEK
Sbjct: 61  FKVLDIAGGTGDLAKAFARQAGSSGEVWLTDINESMLRVGRDRLLNKGLITPTSLCDAEK 120

Query: 121 LPFPDNYFDRVSVAFGLRNMTHKDIALSEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180
           LPFPDNYFDRVSVAFGLRNMTHKD+AL+EMRRVLKPGGKLLVLEFSKVWEPL+KPYDVYS
Sbjct: 121 LPFPDNYFDRVSVAFGLRNMTHKDVALAEMRRVLKPGGKLLVLEFSKVWEPLQKPYDVYS 180

Query: 181 FSVLPWLGQKVANDAESYRYLAESIRMHPDQETLKKMMEDVGLERVQYYNLTAGVAALHT 240
           FSVLPWLG+++A DAESYRYLAESIRMHPDQETLKKMM+D GLERV+Y+NLTAGVAALHT
Sbjct: 181 FSVLPWLGKRIAGDAESYRYLAESIRMHPDQETLKKMMQDAGLERVEYFNLTAGVAALHT 240

Query: 241 GIKL 244
           GIKL
Sbjct: 241 GIKL 244


>D8IS33.1 D8IS33_HERSS Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE EC=2.1.1.-
          Length = 244

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/244 (91%), Positives = 237/244 (97%)

Query: 1   MTNTTHFGYQTVSEDDKVHKVAEVFHSVAAKYDVMNDFMSAGLHRIWKAFTIAQAGVRPG 60
           MTNTTHFGY+TV E++KV KVAEVFHSVAAKYDVMNDFMSAGLHR+WKAFTIAQAG+RPG
Sbjct: 1   MTNTTHFGYETVKEEEKVRKVAEVFHSVAAKYDVMNDFMSAGLHRLWKAFTIAQAGIRPG 60

Query: 61  FKVLDIAGGTGDLSKAFAKQAGPNGEVWLTDINESMLRVGRDRLLNKGIPTPTLLCDAEK 120
           FKVLDIAGGTGDLSKAFAKQAGP+GEVW TDINESMLRVGRDRLLN+GI TPT+LCDAEK
Sbjct: 61  FKVLDIAGGTGDLSKAFAKQAGPSGEVWHTDINESMLRVGRDRLLNQGIVTPTMLCDAEK 120

Query: 121 LPFPDNYFDRVSVAFGLRNMTHKDIALSEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180
           LPF DNYFDRVSVAFGLRNMTHKD AL+EMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS
Sbjct: 121 LPFRDNYFDRVSVAFGLRNMTHKDAALAEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180

Query: 181 FSVLPWLGQKVANDAESYRYLAESIRMHPDQETLKKMMEDVGLERVQYYNLTAGVAALHT 240
           FSVLPWLG+KVANDA+SYRYLAESIRMHPDQETLK+MME VGLERVQY+NLTAGVAALHT
Sbjct: 181 FSVLPWLGKKVANDADSYRYLAESIRMHPDQETLKQMMEQVGLERVQYFNLTAGVAALHT 240

Query: 241 GIKL 244
           GIK+
Sbjct: 241 GIKM 244


>A4G8Y3.1 A4G8Y3_HERAR Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE EC=2.1.1.-
          Length = 244

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/244 (89%), Positives = 234/244 (95%)

Query: 1   MTNTTHFGYQTVSEDDKVHKVAEVFHSVAAKYDVMNDFMSAGLHRIWKAFTIAQAGVRPG 60
           MTN+THFGYQTV+E++KVHKVAEVFHSVAAKYDVMND MSAGLHR+WKAFTIAQAG+RPG
Sbjct: 1   MTNSTHFGYQTVAEEEKVHKVAEVFHSVAAKYDVMNDVMSAGLHRVWKAFTIAQAGIRPG 60

Query: 61  FKVLDIAGGTGDLSKAFAKQAGPNGEVWLTDINESMLRVGRDRLLNKGIPTPTLLCDAEK 120
           FKVLDIAGGTGDL+KAFAK+AGP GEVWLTDINESMLRVGRDRLLN G+  PT LCDAEK
Sbjct: 61  FKVLDIAGGTGDLAKAFAKKAGPGGEVWLTDINESMLRVGRDRLLNNGLIVPTSLCDAEK 120

Query: 121 LPFPDNYFDRVSVAFGLRNMTHKDIALSEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180
           LPFPDNYFDRVSVAFGLRNMTHKD AL+EMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS
Sbjct: 121 LPFPDNYFDRVSVAFGLRNMTHKDAALAEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180

Query: 181 FSVLPWLGQKVANDAESYRYLAESIRMHPDQETLKKMMEDVGLERVQYYNLTAGVAALHT 240
           FSVLPWLGQ++A DA+SYRYLAESIRMHPDQETLKKMM+D GL RV+Y+NLTAGVAALHT
Sbjct: 181 FSVLPWLGQRIAGDADSYRYLAESIRMHPDQETLKKMMQDAGLARVEYFNLTAGVAALHT 240

Query: 241 GIKL 244
           GIKL
Sbjct: 241 GIKL 244


>F1W0Y3.1 F1W0Y3_9BURK Ubiquinone/menaquinone biosynthesis methyltransferase
           UbiE
          Length = 244

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/244 (86%), Positives = 224/244 (91%)

Query: 1   MTNTTHFGYQTVSEDDKVHKVAEVFHSVAAKYDVMNDFMSAGLHRIWKAFTIAQAGVRPG 60
           MTNTTHFGYQTV E DKVHKVAEVFHSVAAKYDVMND MS GLHR+WK FTIAQAG+RPG
Sbjct: 1   MTNTTHFGYQTVDEQDKVHKVAEVFHSVAAKYDVMNDLMSVGLHRLWKTFTIAQAGIRPG 60

Query: 61  FKVLDIAGGTGDLSKAFAKQAGPNGEVWLTDINESMLRVGRDRLLNKGIPTPTLLCDAEK 120
           FKVLDIAGGTGDL+KAFA +AG  GEVWLTDINESMLRVGRDRLLN G+ TPTLLCDAEK
Sbjct: 61  FKVLDIAGGTGDLAKAFAAKAGSTGEVWLTDINESMLRVGRDRLLNNGLSTPTLLCDAEK 120

Query: 121 LPFPDNYFDRVSVAFGLRNMTHKDIALSEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYS 180
           LPFPDNYFDRVSVAFGLRNMTHKD+AL+EMRRVLKPGGKLLVLEFSKV   L+KPYDVYS
Sbjct: 121 LPFPDNYFDRVSVAFGLRNMTHKDVALTEMRRVLKPGGKLLVLEFSKVATALQKPYDVYS 180

Query: 181 FSVLPWLGQKVANDAESYRYLAESIRMHPDQETLKKMMEDVGLERVQYYNLTAGVAALHT 240
           FSVLPWLGQ++A DA+SYRYLAESIRMHPDQETLK MM++ G  RV Y+NLTAGVAALHT
Sbjct: 181 FSVLPWLGQRIAGDADSYRYLAESIRMHPDQETLKTMMQEAGFGRVDYFNLTAGVAALHT 240

Query: 241 GIKL 244
           GIK 
Sbjct: 241 GIKF 244


>E5ALR4.1 E5ALR4_BURRH Ubiquinone/menaquinone biosynthesis methyltransferase
           ubiE EC=2.1.1.-
          Length = 264

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 190/239 (79%), Positives = 217/239 (90%)

Query: 5   THFGYQTVSEDDKVHKVAEVFHSVAAKYDVMNDFMSAGLHRIWKAFTIAQAGVRPGFKVL 64
           THFGYQTV E +K HKVA VFHSVA++YDVMND MS GLHR+WKAFTIAQAGVRPG++VL
Sbjct: 25  THFGYQTVDESEKAHKVAGVFHSVASRYDVMNDLMSGGLHRMWKAFTIAQAGVRPGYRVL 84

Query: 65  DIAGGTGDLSKAFAKQAGPNGEVWLTDINESMLRVGRDRLLNKGIPTPTLLCDAEKLPFP 124
           D+AGGTGDL+KAFA+QAGP+G+VW TDINESMLRVGRDRLL++GI TPTLLCDAEK+PFP
Sbjct: 85  DLAGGTGDLAKAFARQAGPSGQVWHTDINESMLRVGRDRLLDQGIITPTLLCDAEKIPFP 144

Query: 125 DNYFDRVSVAFGLRNMTHKDIALSEMRRVLKPGGKLLVLEFSKVWEPLKKPYDVYSFSVL 184
           D+YFD VSVAFGLRNMTHK++AL+EMRRVLKPGG+LLVLEFSKVW+PLKK YDVYSF VL
Sbjct: 145 DHYFDVVSVAFGLRNMTHKEVALAEMRRVLKPGGRLLVLEFSKVWQPLKKLYDVYSFKVL 204

Query: 185 PWLGQKVANDAESYRYLAESIRMHPDQETLKKMMEDVGLERVQYYNLTAGVAALHTGIK 243
           PWLG+KVA D +SYRYLAESIR+HPDQ+TLK MME  GL+ V+YYNL+ GV ALH   K
Sbjct: 205 PWLGEKVARDPDSYRYLAESIRLHPDQDTLKTMMEQAGLDAVKYYNLSGGVVALHAATK 263