BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0031.0044.p         (240 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IS40.1 D8IS40_HERSS Lipoprotein                                     285   5e-75
F1W092.1 F1W092_9BURK Lipid A acylation protein PagP, palmitoylt...   192   5e-47
E6PRU4.1 E6PRU4_9ZZZZ Putative Antimicrobial peptide resistance ...   127   2e-27
D6CLK0.1 D6CLK0_THIS3 Putative Antimicrobial peptide resistance ...   122   6e-26
D5X4W2.1 D5X4W2_THIK1 Antimicrobial peptide resistance and lipid...   122   6e-26

>D8IS40.1 D8IS40_HERSS Lipoprotein
          Length = 205

 Score =  285 bits (728), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 131/179 (73%), Positives = 155/179 (86%), Gaps = 1/179 (0%)

Query: 63  LGCAATSLPAMAQQSD-EFSWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQ 121
           +  AA +L  +A   D ++S WQ  KDHA+ I ++G+  +Y+SG+AHHGR TYTKEKL++
Sbjct: 27  VATAAIALAPVAHAEDNQYSLWQQTKDHAANIWNQGESELYLSGVAHHGRGTYTKEKLNE 86

Query: 122 LNEHAWGLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIG 181
           LNEHAWGLGYGKT+RNE+G+DESLYGFVLKDSHRHPQ MAGYAYEWV+PI  T LE+G+G
Sbjct: 87  LNEHAWGLGYGKTLRNEKGDDESLYGFVLKDSHRHPQYMAGYAYEWVFPIAKTGLEVGLG 146

Query: 182 GTAMLMSRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240
           GTAMLMSRQDYF  VPFPVPLPLASIGTKK K+MFAYVPRLS+NKN+GDVLL+FGRIEM
Sbjct: 147 GTAMLMSRQDYFHSVPFPVPLPLASIGTKKGKIMFAYVPRLSANKNNGDVLLIFGRIEM 205


>F1W092.1 F1W092_9BURK Lipid A acylation protein PagP, palmitoyltransferase
          Length = 191

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 124/179 (69%), Gaps = 5/179 (2%)

Query: 66  AATSLPA----MAQQSDEFSWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQ 121
           AA ++PA    ++  S + SWW   +D    IVD G  +I +SG A HGR+TYT E++ +
Sbjct: 13  AAHAMPADDTPLSTSSTDVSWWSQGEDKLRHIVDDGVPSIVLSGYARHGRNTYTAERIRE 72

Query: 122 LNEHAWGLGYGKTMRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIG 181
           LNE AWGLGY K +R    N+ESLYG  + DSH  PQ+MAGY ++W+ P+GH   E G+G
Sbjct: 73  LNEKAWGLGYSKIVRTASDNEESLYGLAIYDSHYKPQLMAGYLHQWMQPLGHG-YEAGVG 131

Query: 182 GTAMLMSRQDYFGGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240
            T +L+SR DYF GVPFP  LP+AS GT+K K+M AYVPRLS +K +GDVLL+F R E+
Sbjct: 132 LTGLLISRADYFSGVPFPCILPVASAGTRKTKLMAAYVPRLSRSKGNGDVLLMFLRAEL 190


>E6PRU4.1 E6PRU4_9ZZZZ Putative Antimicrobial peptide resistance and lipid A
           acylation PagP
          Length = 199

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 3/164 (1%)

Query: 75  QQSDEFSWWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQLNEHAWGLGYGKT 134
            Q+    W      + + I D G   ++V+G   H  +TYT  K  QLN HAWGLG+GK 
Sbjct: 34  SQAGVMRWADRATQNLTNIYDNGTPDLFVTGYTWHDPATYTAAKRAQLNSHAWGLGWGKH 93

Query: 135 MRNERGNDESLYGFVLKDSHRHPQIMAGYAYEWVY-PIGHTPLELGIGGTAMLMSRQDYF 193
           + +  GNDE +Y  +  DSHR+ + + GYA +W++ P+G   L  G G TA + SR D F
Sbjct: 94  IIDANGNDEMVYAMMFSDSHRNAEPVVGYAKQWLWDPVG--ALHFGAGYTAGITSRADIF 151

Query: 194 GGVPFPVPLPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGR 237
             +PFP+ LPL S+G  +  +   ++P+++S  N+G+V   F R
Sbjct: 152 KNIPFPIALPLVSVGYGRFTLYGTFLPKVTSTLNNGNVAFFFAR 195


>D6CLK0.1 D6CLK0_THIS3 Putative Antimicrobial peptide resistance and lipid A
           acylation PagP
          Length = 192

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 82  WWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQLNEHAWGLGYGKTMRNERGN 141
           W QS  + A      G D +Y SG   H   TYT  K   LN+HAWG+G+G+   N  GN
Sbjct: 35  WAQSTWNAAVSTTQTGQDDLYFSGYTWHDPGTYTAAKRATLNKHAWGIGWGRHHINADGN 94

Query: 142 DESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIGGTAMLMSRQDYFGGVPFPVP 201
           ++ +Y  +  DSH + + + GYA++W++     P+  G+G T  + SR D F  +PFP+ 
Sbjct: 95  EDMVYAMIFSDSHWNAEPVVGYAHQWMFN-NDAPVGFGLGYTLAVTSRADIFHNIPFPIA 153

Query: 202 LPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240
           LP+ASI   +  +   ++P++++  N+G+V   FGR E 
Sbjct: 154 LPIASIRFGRLSIYGTFIPKVNNKLNNGNVAFFFGRYEF 192


>D5X4W2.1 D5X4W2_THIK1 Antimicrobial peptide resistance and lipid A acylation
           PagP
          Length = 192

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 82  WWQSIKDHASEIVDKGDDAIYVSGLAHHGRSTYTKEKLDQLNEHAWGLGYGKTMRNERGN 141
           W QS  + A      G D +Y SG   H   TYT  K   LN+HAWG+G+G+   N  GN
Sbjct: 35  WAQSTWNAAVSTTQTGQDDLYFSGYTWHDPGTYTAAKRATLNKHAWGIGWGRHHINADGN 94

Query: 142 DESLYGFVLKDSHRHPQIMAGYAYEWVYPIGHTPLELGIGGTAMLMSRQDYFGGVPFPVP 201
           ++ +Y  +  DSH + + + GYA++W++     P+  G+G T  + SR D F  +PFP+ 
Sbjct: 95  EDMVYAMIFSDSHWNAEPVVGYAHQWMFN-NDAPVGFGLGYTLAVTSRADIFHNIPFPIA 153

Query: 202 LPLASIGTKKAKVMFAYVPRLSSNKNSGDVLLVFGRIEM 240
           LP+ASI   +  +   ++P++++  N+G+V   FGR E 
Sbjct: 154 LPIASIRFGRLSIYGTFIPKVNNKLNNGNVAFFFGRYEF 192