BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0024.p (301 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T187.1 A6T187_JANMA Transcriptional regulator, LysR family 486 e-135 A4G7Z4.1 A4G7Z4_HERAR Putative regulatory protein, LysR family 475 e-132 D8ISI4.1 D8ISI4_HERSS LysR family transcription regulator protein 441 e-122 Q4K9I8.1 Q4K9I8_PSEF5 Transcriptional regulator, LysR family 356 3e-96 Q2YA08.1 Q2YA08_NITMU Transcriptional regulator, LysR family 354 8e-96 >A6T187.1 A6T187_JANMA Transcriptional regulator, LysR family Length = 299 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 230/298 (77%), Positives = 263/298 (88%), Gaps = 2/298 (0%) Query: 1 MAALNYKHLHYFWTVAKTGGIARAGERLHLTAQTISGQITLFEETLGYRLFNRVGRKLEL 60 M+ +NYKHLHYFW VAK+GGI RA ERLHLT QTISGQI+ FE+ LGY+LFNRVGR+LEL Sbjct: 1 MSGINYKHLHYFWVVAKSGGIGRASERLHLTPQTISGQISQFEDVLGYKLFNRVGRRLEL 60 Query: 61 NDAGRTVFAYADQIFTLGEELEEVMRFRPGGRPLQFRVGVADA--XTIAYLLLETALKLE 118 NDAGR V YAD+IFTLGEEL+EV+RFRPGG PLQFRVGVADA IAYLLLE A++L Sbjct: 61 NDAGRVVLGYADEIFTLGEELQEVLRFRPGGWPLQFRVGVADAVPKAIAYLLLEPAMELP 120 Query: 119 DPVRIVCREGKLNNLLGDLAIHRLDIVIADSPMPGNIDVRGYSHLLGECSTSFFATPALA 178 + +RIVCREGKL NLL DLA+HRLDIVIADSPMP NIDVRGY+HLLGEC +FFAT ALA Sbjct: 121 ESLRIVCREGKLTNLLADLAVHRLDIVIADSPMPANIDVRGYNHLLGECGMTFFATDALA 180 Query: 179 KAHKKNFPQSLDGAPFLMPGEDAAVRPKLLRWFEKEKIRPQIAGEFDDGALLNAFGEAGT 238 K ++K+FP+SLD APFLMPGEDAAVRP+L+RWFEKEK+RP+I GEFDDGALL AFGEAG Sbjct: 181 KTYQKDFPKSLDAAPFLMPGEDAAVRPRLIRWFEKEKVRPRIVGEFDDGALLQAFGEAGK 240 Query: 239 GIFAAPSAVAAQLKQQLGVVQIGQTEQITEQFYAISVERRLTHPAVLAIQSAARESLI 296 GIFAAPSAVA Q+K+Q GV +IG+T ++EQFYAISVER+LTHPAV+AI SAARESLI Sbjct: 241 GIFAAPSAVAEQIKKQYGVTEIGRTNAVSEQFYAISVERQLTHPAVVAISSAARESLI 298 >A4G7Z4.1 A4G7Z4_HERAR Putative regulatory protein, LysR family Length = 296 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 227/295 (76%), Positives = 258/295 (87%), Gaps = 2/295 (0%) Query: 4 LNYKHLHYFWTVAKTGGIARAGERLHLTAQTISGQITLFEETLGYRLFNRVGRKLELNDA 63 +NYKHLHYFW VAK GGI RA ERLHLT QTISGQITLFE+ LGY+LFNR+GR+LELNDA Sbjct: 1 MNYKHLHYFWVVAKAGGIGRASERLHLTPQTISGQITLFEDVLGYKLFNRIGRRLELNDA 60 Query: 64 GRTVFAYADQIFTLGEELEEVMRFRPGGRPLQFRVGVADAX--TIAYLLLETALKLEDPV 121 GR V YAD+IFTLGEEL+EV+RFRPGG PLQFRVGVADA IAYLLLE A++L + + Sbjct: 61 GRVVLGYADEIFTLGEELQEVLRFRPGGWPLQFRVGVADAVPKAIAYLLLEPAMELPESL 120 Query: 122 RIVCREGKLNNLLGDLAIHRLDIVIADSPMPGNIDVRGYSHLLGECSTSFFATPALAKAH 181 R+VCREGKL NLL DLA+HRLDIVIADSPMP NIDVRGY+HLLGEC +FFAT LAK + Sbjct: 121 RLVCREGKLTNLLADLAVHRLDIVIADSPMPANIDVRGYNHLLGECGVTFFATDELAKEY 180 Query: 182 KKNFPQSLDGAPFLMPGEDAAVRPKLLRWFEKEKIRPQIAGEFDDGALLNAFGEAGTGIF 241 ++ FP+SLDGAPFLMPGEDAAVRP+L+RWFEKEK+RP+I GEFDDGALL AFG AG GIF Sbjct: 181 EEGFPKSLDGAPFLMPGEDAAVRPRLIRWFEKEKVRPRIIGEFDDGALLQAFGGAGKGIF 240 Query: 242 AAPSAVAAQLKQQLGVVQIGQTEQITEQFYAISVERRLTHPAVLAIQSAARESLI 296 AAPSAVA Q+ +Q GV +IG+T +TEQFYAISVER+LTHPAV+AI SAARESLI Sbjct: 241 AAPSAVADQIIKQYGVTEIGRTSLVTEQFYAISVERQLTHPAVVAISSAARESLI 295 >D8ISI4.1 D8ISI4_HERSS LysR family transcription regulator protein Length = 303 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 228/299 (76%), Positives = 266/299 (88%), Gaps = 2/299 (0%) Query: 1 MAALNYKHLHYFWTVAKTGGIARAGERLHLTAQTISGQITLFEETLGYRLFNRVGRKLEL 60 MA LNYKHLHYFWTVAKTGG+ARA ERLHLTAQTISGQ++LFEE+LGY LF RVGR+LEL Sbjct: 1 MAGLNYKHLHYFWTVAKTGGVARASERLHLTAQTISGQLSLFEESLGYPLFRRVGRRLEL 60 Query: 61 NDAGRTVFAYADQIFTLGEELEEVMRFRPGGRPLQFRVGVADA--XTIAYLLLETALKLE 118 ND GR VF YA++IF++GEELEE +R RPGGR LQ RVGVADA IAYLLLE+AL ++ Sbjct: 61 NDEGRMVFDYAERIFSIGEELEEALRLRPGGRALQLRVGVADAVPKAIAYLLLESALAMQ 120 Query: 119 DPVRIVCREGKLNNLLGDLAIHRLDIVIADSPMPGNIDVRGYSHLLGECSTSFFATPALA 178 DP+RI+CREGKL+ LL DLA+H+LDI+IADSPMP N+DVRGY HLLGEC TSFFATP LA Sbjct: 121 DPIRIICREGKLDVLLADLALHKLDIIIADSPMPPNVDVRGYHHLLGECDTSFFATPELA 180 Query: 179 KAHKKNFPQSLDGAPFLMPGEDAAVRPKLLRWFEKEKIRPQIAGEFDDGALLNAFGEAGT 238 + ++K FP S DGAPFLMPGEDAAVRP+LLRWFEKEKIRP+I GEFDDGALL AFG+AG Sbjct: 181 RRYRKGFPGSFDGAPFLMPGEDAAVRPRLLRWFEKEKIRPRITGEFDDGALLLAFGDAGA 240 Query: 239 GIFAAPSAVAAQLKQQLGVVQIGQTEQITEQFYAISVERRLTHPAVLAIQSAARESLII 297 GIFAAP+A+AAQ+++Q G+V+IG+TE I EQFYAISV+R+LTHPAVLAIQSAAR +LI+ Sbjct: 241 GIFAAPAAIAAQIRKQYGLVEIGRTEAIREQFYAISVQRKLTHPAVLAIQSAARGNLIV 299 >Q4K9I8.1 Q4K9I8_PSEF5 Transcriptional regulator, LysR family Length = 301 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 165/297 (55%), Positives = 218/297 (73%), Gaps = 2/297 (0%) Query: 4 LNYKHLHYFWTVAKTGGIARAGERLHLTAQTISGQITLFEETLGYRLFNRVGRKLELNDA 63 LNY+ LHYFW VAKTG I RA ++L+LT QTISGQI+L E+T G LF RVGR+LEL +A Sbjct: 2 LNYRQLHYFWVVAKTGSIVRACDQLNLTPQTISGQISLLEQTYGIELFRRVGRQLELTEA 61 Query: 64 GRTVFAYADQIFTLGEELEEVMRFRPGGRPLQFRVGVADA--XTIAYLLLETALKLEDPV 121 GR YA+Q+F LG ELE ++R RP + +QFRVGVAD +I Y L+ ++L +P+ Sbjct: 62 GRQALPYAEQMFQLGGELEAMLRARPDEQQIQFRVGVADVVPKSIVYRLIAPTMELSEPI 121 Query: 122 RIVCREGKLNNLLGDLAIHRLDIVIADSPMPGNIDVRGYSHLLGECSTSFFATPALAKAH 181 R+ CRE KL LL DLAI RLD+VI+DSPMP ++D++GYS LGEC SFFAT LA+ H Sbjct: 122 RLTCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATEELARRH 181 Query: 182 KKNFPQSLDGAPFLMPGEDAAVRPKLLRWFEKEKIRPQIAGEFDDGALLNAFGEAGTGIF 241 +FP+ L GAP L+PG++ VR +LLRWF +++++P+I GEFDD AL+ AFG++G+GIF Sbjct: 182 GADFPRGLHGAPLLIPGQETVVRSRLLRWFAEQQLQPRIIGEFDDSALMQAFGQSGSGIF 241 Query: 242 AAPSAVAAQLKQQLGVVQIGQTEQITEQFYAISVERRLTHPAVLAIQSAARESLIIP 298 APS +A ++ Q GV IGQT+ + E FYAISVER++ HP ++AI AR L P Sbjct: 242 IAPSVIADEVMHQYGVQLIGQTDAVAESFYAISVERKVKHPGIVAITEGARRELFTP 298 >Q2YA08.1 Q2YA08_NITMU Transcriptional regulator, LysR family Length = 302 Score = 354 bits (909), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 171/294 (58%), Positives = 214/294 (72%), Gaps = 2/294 (0%) Query: 4 LNYKHLHYFWTVAKTGGIARAGERLHLTAQTISGQITLFEETLGYRLFNRVGRKLELNDA 63 LNYK L+YFW VAK G I RA ERL+LT QT+SGQI L E+ LG LF RVGR+LEL + Sbjct: 2 LNYKQLNYFWAVAKAGSIVRASERLNLTPQTLSGQIGLLEDALGVPLFLRVGRRLELTET 61 Query: 64 GRTVFAYADQIFTLGEELEEVMRFRPGGRPLQFRVGVADAX--TIAYLLLETALKLEDPV 121 GR +YAD+IF +G ELEE +R RP + FRVGV DA +IAY LL A+ L PV Sbjct: 62 GRLALSYADEIFQIGNELEEALRARPERHAIPFRVGVDDAVPKSIAYRLLTPAMGLASPV 121 Query: 122 RIVCREGKLNNLLGDLAIHRLDIVIADSPMPGNIDVRGYSHLLGECSTSFFATPALAKAH 181 RIVCRE KL LL +LAI R+D+++AD PMP +V+GYSH LG C +FFA P LAK Sbjct: 122 RIVCREDKLARLLVELAIQRVDLILADRPMPDEANVKGYSHKLGNCGITFFAAPCLAKTF 181 Query: 182 KKNFPQSLDGAPFLMPGEDAAVRPKLLRWFEKEKIRPQIAGEFDDGALLNAFGEAGTGIF 241 KK +P LD AP L+PG+DAA+R L+RWF+ ++RP I GEFDD AL+ AFG+AG GIF Sbjct: 182 KKKWPHVLDAAPLLIPGKDAAIRLPLMRWFDVHQLRPHIVGEFDDSALMQAFGQAGIGIF 241 Query: 242 AAPSAVAAQLKQQLGVVQIGQTEQITEQFYAISVERRLTHPAVLAIQSAARESL 295 APS +A +++++ GVV +G T+++TEQFYAIS+ERRLTHPAV+AI A L Sbjct: 242 IAPSVIADEVQREHGVVVVGCTDEVTEQFYAISLERRLTHPAVVAINDTAHREL 295