BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0031.0023.p (287 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISI5.1 D8ISI5_HERSS LysR family transcription regulator 386 e-105 B3R5G7.1 B3R5G7_CUPTR Putative TRANSCRIPTIONal REGULATOR, LysR f... 290 2e-76 Q0K826.1 Q0K826_CUPNH Transcriptional regulator, LysR-family 289 3e-76 Q0BG75.1 Q0BG75_BURCM Transcriptional regulator, LysR family 288 7e-76 A9AC15.1 A9AC15_BURM1 Transcriptional regulator, LysR family 283 2e-74 >D8ISI5.1 D8ISI5_HERSS LysR family transcription regulator Length = 296 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/285 (65%), Positives = 238/285 (83%), Gaps = 2/285 (0%) Query: 1 MEIAALEIFRAVVSEGGITRAAERLHRVQSNVTTRIRQLEESVGVPLFIRDRKRLLLTPA 60 ME+A LEIFR VV+EGG+TRAAERL+RVQSNVTTRI+QLE+S+GVPLF+RDR+R++LT A Sbjct: 10 MELAELEIFRTVVAEGGVTRAAERLNRVQSNVTTRIKQLEQSMGVPLFVRDRRRMVLTAA 69 Query: 61 GEILLDYSERILGLVQEARQAVLPQGPRGRLRVGAMESTAASRLPAPLAAFHQRWPEVQL 120 GE LLDY+ERIL L QEARQAV PQ PRGRLR+G+MES AASRLP PLA FHQRWPEV+L Sbjct: 70 GEALLDYAERILDLAQEARQAVAPQSPRGRLRIGSMESAAASRLPGPLAEFHQRWPEVRL 129 Query: 121 ELTTSASQMLIDQVRAFKLDAALVAGPIDDDVFVATPLYQEELVIVVPRGHARVKSPDDL 180 EL+T+ + +L+ QVRA KLDAALVAGP+ D F ATPL++EEL++V PR H RV++P+++ Sbjct: 130 ELSTAPTDVLMAQVRACKLDAALVAGPVSDPAFDATPLFREELLLVTPRSHRRVRAPEEV 189 Query: 181 TVETLIVFEQGCAYRKRAEHWFASGTIKGRRPARLLELGSYHAMLACVAAGAGIAFVPRT 240 ++TLIVFEQGCAYR+ AE WFA G GR+ R LEL SYHA+LACV+AGAG+A VPR+ Sbjct: 190 MLDTLIVFEQGCAYRRHAEAWFA-GHGAGRQLPRTLELASYHAILACVSAGAGVAVVPRS 248 Query: 241 ILNMHGQ-QNFSTYSLGKEGRITTYLICRHDQQTTVYDALRTLLL 284 ++ M + F+T+SLG++GRITT+LI R ++ + + ALR LL+ Sbjct: 249 VIAMQMEPHGFATHSLGRDGRITTFLISRRERYSASFLALRALLM 293 >B3R5G7.1 B3R5G7_CUPTR Putative TRANSCRIPTIONal REGULATOR, LysR family Length = 299 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 151/280 (53%), Positives = 193/280 (68%), Gaps = 4/280 (1%) Query: 1 MEIAALEIFRAVVSEGGITRAAERLHRVQSNVTTRIRQLEESVGVPLFIRDRKRLLLTPA 60 M++AALEIFRAVV GGITRAAERLHRVQSNVTTRIRQLE+++GV LF+RD +R++LTP+ Sbjct: 1 MDLAALEIFRAVVEAGGITRAAERLHRVQSNVTTRIRQLEQTLGVDLFVRDGRRMVLTPS 60 Query: 61 GEILLDYSERILGLVQEARQAVLPQGPRGRLRVGAMESTAASRLPAPLAAFHQRWPEVQL 120 G+ L DY+ RIL L +EARQA+LP P GRLR+ +MESTAASRLP LAA+HQ WPEVQL Sbjct: 61 GQTLFDYACRILTLTEEARQALLPARPHGRLRIASMESTAASRLPQVLAAYHQAWPEVQL 120 Query: 121 ELTTSASQMLIDQVRAFKLDAALVAGPIDDDVFVATPLYQEELVIVVPRGHARVKSPDDL 180 EL T A++ D + F++D A VA P+ D A P+++EELV++ H V DL Sbjct: 121 ELVTLATRQAFDALARFEVDCAFVAEPLADPALRAVPVFEEELVVITREHHRPVHGAADL 180 Query: 181 TVETLIVFEQGCAYRKRAEHWFASGTIKGRRPARLLELGSYHAMLACVAAGAGIAFVPRT 240 V TL+ FE GC YR R E W+ SG R+L+L SYHA++ACVAAG G A VPR+ Sbjct: 181 EVPTLLAFEPGCNYRARLETWYGSGPAPT---PRVLQLSSYHAIVACVAAGIGAAIVPRS 237 Query: 241 ILNMHGQ-QNFSTYSLGKEGRITTYLICRHDQQTTVYDAL 279 +L ++ +SLG GR+ T L + + AL Sbjct: 238 VLGLYRDLPAIRQHSLGAAGRVRTLLAWQPSMASAALHAL 277 >Q0K826.1 Q0K826_CUPNH Transcriptional regulator, LysR-family Length = 297 Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 151/288 (52%), Positives = 196/288 (68%), Gaps = 4/288 (1%) Query: 1 MEIAALEIFRAVVSEGGITRAAERLHRVQSNVTTRIRQLEESVGVPLFIRDRKRLLLTPA 60 M++AALEIFRAVV GGITRAAERLHRVQSNVTTRIRQLE+S+GV LF+RD +R++LTP+ Sbjct: 1 MDLAALEIFRAVVEAGGITRAAERLHRVQSNVTTRIRQLEQSLGVDLFVRDGRRMVLTPS 60 Query: 61 GEILLDYSERILGLVQEARQAVLPQGPRGRLRVGAMESTAASRLPAPLAAFHQRWPEVQL 120 G+ L DY+ RIL + +EARQAVLP P GRLR+ +MESTAASRLP LAA+HQ WP VQL Sbjct: 61 GQTLFDYACRILSMTEEARQAVLPARPHGRLRIASMESTAASRLPNVLAAYHQAWPAVQL 120 Query: 121 ELTTSASQMLIDQVRAFKLDAALVAGPIDDDVFVATPLYQEELVIVVPRGHARVKSPDDL 180 EL T A++ +D + F+++ A VA P+ D A P+++EELV++ H V++ DL Sbjct: 121 ELVTLATRQALDALARFEVECAFVAEPLTDPALSAVPVFEEELVVITRARHRPVRTAADL 180 Query: 181 TVETLIVFEQGCAYRKRAEHWFASGTIKGRRPARLLELGSYHAMLACVAAGAGIAFVPRT 240 V TL+ FE GC YR R E+W+ G R+L+L SYHA++ACVAAG G A VPR+ Sbjct: 181 EVPTLLAFEPGCNYRARLENWYVIGDAPT---PRVLQLSSYHAIVACVAAGIGAAIVPRS 237 Query: 241 ILNMHGQ-QNFSTYSLGKEGRITTYLICRHDQQTTVYDALRTLLLTES 287 +L ++ +SLG GR+ T L + AL L S Sbjct: 238 VLGLYRDLPAIRQHSLGAAGRVRTLLAWHPSMASAALHALIDTLTAHS 285 >Q0BG75.1 Q0BG75_BURCM Transcriptional regulator, LysR family Length = 309 Score = 288 bits (737), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 162/288 (56%), Positives = 209/288 (72%), Gaps = 8/288 (2%) Query: 1 MEIAALEIFRAVVSEGGITRAAERLHRVQSNVTTRIRQLEESVGVPLFIRDRKRLLLTPA 60 M++AAL IFRAVV E G+TRAA +L+RVQSNVTTRI+QLEE +G LF+RD +RL+LTPA Sbjct: 1 MDLAALAIFRAVVRENGVTRAAAKLNRVQSNVTTRIKQLEEELGAALFVRDGRRLVLTPA 60 Query: 61 GEILLDYSERILGLVQEARQAVLPQGPRGRLRVGAMESTAASRLPAPLAAFHQRWPEVQL 120 GE LL Y+ER+L L EAR AV PRGRLR+GAMESTAASRLPA LA +HQ WPEV L Sbjct: 61 GETLLPYAERLLALADEARHAVREDRPRGRLRLGAMESTAASRLPAVLARYHQAWPEVTL 120 Query: 121 ELTTSASQMLIDQVRAFKLDAALVAGPID----DDVFVATPLYQEELVIVVPRGHARVKS 176 EL T + LID+VRAF++DAALVA P D+F +++EEL+++ PRGH V+S Sbjct: 121 ELVTGTTGWLIDKVRAFEIDAALVARPPAPDALPDMFDTVQVFREELLLLTPRGHPPVRS 180 Query: 177 PDDLTVETLIVFEQGCAYRKRAEHWFASGTIKGRRPARLLELGSYHAMLACVAAGAGIAF 236 P D+ + TLI FE+GC YR AE W+A+ +K PAR+LELGSYHA++ACVAAGAG+A Sbjct: 181 PRDVMLPTLIAFERGCTYRSHAEQWYAAHGVK---PARVLELGSYHAIVACVAAGAGVAV 237 Query: 237 VPRTILNMHGQ-QNFSTYSLGKEGRITTYLICRHDQQTTVYDALRTLL 283 PR++L+ + +N + +++ I T LI RH + ALR +L Sbjct: 238 APRSVLDRQPEAENLALHAVPAFDAIDTLLIWRHGHASAALGALRDVL 285 >A9AC15.1 A9AC15_BURM1 Transcriptional regulator, LysR family Length = 304 Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 154/278 (55%), Positives = 198/278 (71%), Gaps = 8/278 (2%) Query: 1 MEIAALEIFRAVVSEGGITRAAERLHRVQSNVTTRIRQLEESVGVPLFIRDRKRLLLTPA 60 M++AAL IFRAVV E G+TRAA +L+RVQSNVTTRI+QLEE +G LF+RD +RL+LTPA Sbjct: 1 MDLAALAIFRAVVRENGVTRAAAKLNRVQSNVTTRIKQLEEELGAALFVRDGRRLVLTPA 60 Query: 61 GEILLDYSERILGLVQEARQAVLPQGPRGRLRVGAMESTAASRLPAPLAAFHQRWPEVQL 120 G LL Y+ER+L L EAR AV PRGRLR+G MESTAASRLPA LA +H WP+V L Sbjct: 61 GRTLLPYAERLLALADEARDAVREDTPRGRLRLGTMESTAASRLPAVLARYHHAWPDVSL 120 Query: 121 ELTTSASQMLIDQVRAFKLDAALVAGPID----DDVFVATPLYQEELVIVVPRGHARVKS 176 EL T + LID+VR F +DAAL A P D F P+++EELV++ PRGH V++ Sbjct: 121 ELVTGTTGWLIDRVREFDVDAALFARPPAPDTLPDTFETVPVFREELVLLTPRGHPPVRT 180 Query: 177 PDDLTVETLIVFEQGCAYRKRAEHWFASGTIKGRRPARLLELGSYHAMLACVAAGAGIAF 236 P D+ + TLI FE+GC YRK E W+A G +PAR+LELGSYHA++ACVAAGAGIA Sbjct: 181 PRDVILPTLIAFERGCTYRKYVEQWYAE---YGLKPARVLELGSYHAIVACVAAGAGIAV 237 Query: 237 VPRTILNMHGQ-QNFSTYSLGKEGRITTYLICRHDQQT 273 PR++L++ + N + +++ G I T L RH ++ Sbjct: 238 APRSVLDLQPETDNVAQHAIAAFGAIDTLLAWRHGYES 275