BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0202.p         (55 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T146.1 RL33_JANMA 50S ribosomal protein L33                         110   8e-23
F1W289.1 F1W289_9BURK LSU ribosomal protein L33p                      109   2e-22
A4G7W1.1 RL33_HERAR 50S ribosomal protein L33                         107   6e-22
D8J1S8.1 D8J1S8_HERSS 50S ribosomal protein L33                       107   6e-22
E5AN05.1 E5AN05_BURRH 50S ribosomal protein L33                       100   7e-20

>A6T146.1 RL33_JANMA 50S ribosomal protein L33
          Length = 55

 Score =  110 bits (275), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 54/55 (98%), Positives = 55/55 (100%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK+AIMKFDPKVRKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMAIMKFDPKVRKHVEYKETKIK 55


>F1W289.1 F1W289_9BURK LSU ribosomal protein L33p
          Length = 55

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/55 (96%), Positives = 55/55 (100%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK++IMKFDPKVRKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMSIMKFDPKVRKHVEYKETKIK 55


>A4G7W1.1 RL33_HERAR 50S ribosomal protein L33
          Length = 55

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 55/55 (100%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK++I+KFDPKVRKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKMSIIKFDPKVRKHVEYKETKIK 55


>D8J1S8.1 D8J1S8_HERSS 50S ribosomal protein L33
          Length = 55

 Score =  107 bits (267), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 52/55 (94%), Positives = 54/55 (98%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEK++IMKFDPK RKHVEYKETKIK
Sbjct: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKISIMKFDPKARKHVEYKETKIK 55


>E5AN05.1 E5AN05_BURRH 50S ribosomal protein L33
          Length = 55

 Score =  100 bits (249), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/55 (89%), Positives = 50/55 (90%)

Query: 1  MAKSGRDKIKLESTAGTGHFYTTTKNKRTTPEKLAIMKFDPKVRKHVEYKETKIK 55
          MAK  RDKIKLESTAGTGHFYTTTKNKRT PEK+AIMKFDP  RKHVEYKETKIK
Sbjct: 1  MAKGARDKIKLESTAGTGHFYTTTKNKRTMPEKMAIMKFDPVARKHVEYKETKIK 55